Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00008 ATGGCCTCTGTTTCAGCTACCTCTCTTAGGTTCCAGCTACCGCCCAACCAACATTCCAAGATCTACCAGGAAGACGGCGGCGCTGATAGGCACTCCAGCTTCTTATCTTTGAAATCCTCCTTCTTCTCTCCTTTACGTAACATTCCTTCTTTAAGGAAGCAAAACTCTGCTGTTGCAGCTGCCCCCAAGGTCTCCATGCGCGTCGCGTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGACAGAACGCCTTTTGAAAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATACGAGGAAGGCGAGAAAGGCACAGATCCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCCATAGCTGCTGCAGTGGGAATCGTGGCACTTGTAGGGTTGCTCACCTACACTTTCCTTTTTGGTGATGTAAAACTGTTTTGGGTGCAAAACCCAGGAAATGTGCTTCACAAGGATAGGATGGTTAGCGAGATCGACCCAACAAAGTACAAGAATACCTTGCCCGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATCCTACGAGTTCTTCAAGAACTACTATTCTTACATGGTTGGACCAGAGAATGCAGCCAACTACAAAACTTTCATATACTTTGCTGCTTCAGCGTCTGCAGAAGTCATTGCCGATGTTGCTCTTTGCCCCATGGAGGCCGTCAAAGTTCGCTTCCAAACTCTGAGACTCTACAAAGGCCTGGTTCCTCTTTGGGAGCGTCTGACAGATTCCATATACCATGGTGAAATTTGCCTCTTTCCAAACAATTGTTGA 876 46.69 MASVSATSLRFQLPPNQHSKIYQEDGGADRHSSFLSLKSSFFSPLRNIPSLRKQNSAVAAAPKVSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKNANEFDTRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLLTYTFLFGDVKLFWVQNPGNVLHKDRMVSEIDPTKYKNTLPGYSAQGACKFGSYEFFKNYYSYMVGPENAANYKTFIYFAASASAEVIADVALCPMEAVKVRFQTLRLYKGLVPLWERLTDSIYHGEICLFPNNC 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45311 48475 + CmaCh11G000080.1 Cma11g00008 302517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00008 291 ProSiteProfiles Rubredoxin-like domain profile. 71 111 IPR024934 GO:0005506
Cma11g00008 291 Gene3D - 72 111 - -
Cma11g00008 291 SUPERFAMILY Mitochondrial carrier 195 274 IPR023395 -
Cma11g00008 291 CDD rubredoxin 74 111 IPR024935 GO:0005506
Cma11g00008 291 Gene3D Mitochondrial carrier domain 189 276 IPR023395 -
Cma11g00008 291 SUPERFAMILY Rubredoxin-like 71 116 - -
Cma11g00008 291 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 14 159 - -
Cma11g00008 291 Pfam Rubredoxin 74 108 IPR024935 GO:0005506
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00026 Cma11g00008 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00008 Cma-Chr11:45311 Cma15g00816 Cma-Chr15:4108364 1.46E-31 dispersed
Cma10g00023 Cma-Chr10:88436 Cma11g00008 Cma-Chr11:45311 1.70E-81 wgd
Cma11g00008 Cma-Chr11:45311 Cma11g01543 Cma-Chr11:10063250 2.85E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00008 - - cmos:111429830 256.144