Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00038 ATGCAAGACTTGGCCGTCTCCCTCTTCCTTCTTCTTTCCATCTCTCTCTGGGCTTTCTTTCTTATTTATGTTTTCATTTATAAATTTCACCGCTTTTCTACTAACCGCTCTTCCCCTCCCTCTTACCCTTTCATCGGCTGCTTCATCTCCTTCTTCAAAAACCGGCGCCGCCTTCTCTCCTGGTACACCCACCTGCTTTCCAACTCTCCGTCCTTGACCATTGTGGTGCACCGCCTCGGTTCGAGGCGGACCGTCGTCACGGCCAACCCAGCCAACGTCGAGTACATGCTCAAGACTAATTTTCTTAATTACCCTAAAGGAAAGCCCTTCACTGATATACTCGGCGATCTCCTCGGCTGCGGCATTTTCAACGTCGACGGCGAGTTGTGGTCCACACAGCGCAAGCTCGCTAGCCATGAGTTTTCCGCCAAGTCTTTAAGGGAATTTGTGGTTAAGACGCTTGAAGATGAAATTCATCTCCGTTTGATTCCGTTGCTCCAGAACGCTGCCCGGACTAACGGCGTCTTGGATTTGCAAGACGTTCTGGGTAGACTCGCTTTTGACACCGTTTGTAAGATGACTTTAGGAACTGACGAGCAATGTTTGGACATGTCGCGCCCAGTTCCAGCAATAGTAAATGCATTCGACATGGCCACGGGGATCAGCGCCAAGCGGGCAATAGCGCCAGTCTCTCTGGCGTGGAAGGCCAAGCGGCTGTTCAACATCGGCTCCGAGAAGCGGCTCAAAGAAGCCGTCCAAATGGTACACTCATGGGTCTCCCACATCATTCGCAACAAAAACCTCGACAACAATGAAGACAGCGATTTATTATCTCGGCTGTTATCCGCCGGCCACGGCGAGGAAGTCGTCCGAGACATGGTCGTCAGCTTCATAATGGCTGGCCGCGACACCACCTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTCACAAAGCATCCCAAAGTGGAACAAACCCTTATGGACGAAGTGGCTTCCTTGTCCAACAATTACCAAACGGCGTCGTTGGGTTACGGCTACGAAGAATTAAAGGACATGAAGTATTTGAAGGCGTGTTTGTGTGAGTCCATGCGGCTTTACCCACCGGTGGCTTGGGATTCAAAGCACGCAGCGGCGGCGGACATTCTGCCGGACGGAACTCCGGTGAGGAAAGGGGACAGAGTGACATATTTTCCGTACGGAATGGGGCGGATGGAGGAGCTGTGGGGTCCGGACCGGGAGGAGTTCAAACCGGAACGGTGGTTTGAAAAGGGGGAGGCGAAAGCGGTGAGTCCGTTTAAGTTCCCGGTGTTCCAAGGCGGGCCGAGAATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGGTAGCCACGGTTTTGAAGCGGTTTGAGTTTAGAGCGGTGAGTGAAAGTGAACCGGTTTTTGTGCCGTTGTTGACAGCTCACATGGCAGGTGGATTACAGGTTTATGTTAGAGAAAGAAGAGGACAAAAGTGA 1503 52.03 MQDLAVSLFLLLSISLWAFFLIYVFIYKFHRFSTNRSSPPSYPFIGCFISFFKNRRRLLSWYTHLLSNSPSLTIVVHRLGSRRTVVTANPANVEYMLKTNFLNYPKGKPFTDILGDLLGCGIFNVDGELWSTQRKLASHEFSAKSLREFVVKTLEDEIHLRLIPLLQNAARTNGVLDLQDVLGRLAFDTVCKMTLGTDEQCLDMSRPVPAIVNAFDMATGISAKRAIAPVSLAWKAKRLFNIGSEKRLKEAVQMVHSWVSHIIRNKNLDNNEDSDLLSRLLSAGHGEEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKVEQTLMDEVASLSNNYQTASLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEELWGPDREEFKPERWFEKGEAKAVSPFKFPVFQGGPRMCLGKEMAFIQMKYVVATVLKRFEFRAVSESEPVFVPLLTAHMAGGLQVYVRERRGQK 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 173319 174910 + CmaCh11G000380.1 Cma11g00038 302547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00038 500 Pfam Cytochrome P450 39 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 SUPERFAMILY Cytochrome P450 38 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PANTHER CYTOCHROME P450 24 494 - -
Cma11g00038 500 PANTHER CYTOCHROME P450 94B3 24 494 - -
Cma11g00038 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS E-class P450 group IV signature 352 368 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS E-class P450 group IV signature 386 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS E-class P450 group IV signature 403 421 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00038 500 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00068 Cma11g00038 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00016 Cma-Chr6:102301 Cma11g00038 Cma-Chr11:173319 5.26E-130 dispersed
Cma11g00038 Cma-Chr11:173319 Cma14g00499 Cma-Chr14:2440225 4.20E-140 dispersed
Cma11g01501 Cma-Chr11:9856432 Cma11g00038 Cma-Chr11:173319 1.33E-33 dispersed
Cma02g01764 Cma-Chr2:9847186 Cma11g00038 Cma-Chr11:173319 3.32E-158 transposed
Cma06g00463 Cma-Chr6:2183374 Cma11g00038 Cma-Chr11:173319 2.91E-140 transposed
Cma13g00289 Cma-Chr13:2580900 Cma11g00038 Cma-Chr11:173319 4.08E-142 transposed
Cma10g00068 Cma-Chr10:262587 Cma11g00038 Cma-Chr11:173319 0 wgd
Cma11g00038 Cma-Chr11:173319 Cma11g01500 Cma-Chr11:9855916 2.01E-34 wgd
Cma11g00038 Cma-Chr11:173319 Cma14g00711 Cma-Chr14:3599654 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00038 K20665 - csv:101202989 811.601