Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00050 ATGCTGGGGCTCTCGGTCGTTGATTTAGCGCCGGAGCGGAGCGTCATGGCGAGAGTTAACGACAATTGGGAGAGGCTAGTGCGTGCGACTCTGAAGAGAGAACAGCTCAGAAATGCAGGGCAAGGACATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCTCCTTCTCTTGGAAAAACCACCAACATTGATGCCATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCACTGTTGCCAGGATTTTGTGTGAGCAGGCATACAAAATGGCACAAAACTTAGATCCTAACAGTGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGAGCATCTATCAATCGTCATCGTGATATTGAACATTTGTGGGAGTTCTACAAGCTATATAAGAGACGACATAGAGTAGATGATATACAAAGAGAAGAACAGAAATGGCGGGAGTCTGGAGGAATCAGTGCGAACTTGGGAGAGTTGGAGTTCAGATATTCTGAAGCAAAGAAAGTAATGGCAAACCTTCAGGCTTTAGTTGAGGTGATGGATGCCCTCAAGGGAGATGCTGATCCTCAAGGAGTTGGAAGATTGATTATGGAGGAGCTACGAAGAGTTAGAAGTTCCGATACTACGTTATCAGGGGAATTCGTACCCTACAATATTGTCCCTTTGGACGCCCAATCGATAACCAATGCCATTGGAATTTTCCCAGAAGTTAGGGCTACAATATCCGCAATCAGATATAATGAGCATTTCCCTACACTGCCTTCACAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATATATTTGGATTCCAGAGAGACAACGTACGGAATCAACGAGAGCATGTGGTTCTCATGGTAGCGAATGCTCAATCTCGTCTTGGCATTCCTGATAATGGTGATCCAAAAATAGATGAGAAAGCAATCAACGAGGTTTTCTTGAAGGTGCTTGATAACTACATCAAATGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTTGAGGCAATTAATAGGGACAGGAAACTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTCCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCATCATATGGCAAAAGAACTGGATGCTAACCTTGATCATGGAGAAGCAGTTCGTTCTAATAACTGTAAGCTGGAAGATGGTTCAGTGTCTTTCCTTCAACGAATCATTTGTCCTATATACGAGACACTTGTAGCTGAAACTGAAAGAAACAAAAATGGAAAAGCCGCACATTCAGAATGGAGGAACTATGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTCGAATTGGGCTGGCCAATGAGGGAGGAATCAAGTTTTTTACGGAAGCCTAGAGGCTCAAAACGGACTGGCAAGACTTCTTTTGTTGAGCATCGCACATTTTTTCACCTATACCGCAGTTTCCACCGTCTCTGGATCTTTTTGGCAGTTATATTCCAGGCTCTGACAATTTTTGCCTTCCATAATGAGCGTTTGAATTTGGAAACTTTGAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTCATCGAGAGTTGCTTAGATGTGTTGCTTACTTTTGGGGCATACACCACTGCAAGAGGGATGGCTATATCAAGGATTGTTATTAGGTTTTTCTGGTGGGGACTGAGTTCTGTTTTTGTGACCTATGTTTATGTGAAGGTTCTTGAAGAAAGACATACTCGAAGCGCTGATAATTCATTCTATTTTCGGATATATATTATTGTGTTGGGTGTTTATGCTTCTTTACGCCTTGTGTTTTCAATGCTGCTAAAGTTACCTGCATGCCATACTCTATCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTATGTCGGTCGTGGTCTATATGAAAAACTGAGTGATTATTGCAGATATGTAGCCTTTTGGCTGGTGCTCTTGATATGTAAATTCGTTTTTGCTTACTTTCTTCAGATTAAACCACTTGTCCAACCAACCACTGTCATTGCCAACCTTCCATCTCTTGAATATTCGTGGCATTCTTTCATTTCTAAGAACAATAATAACTTATCTACTATAGCTAGCTTATGGGCTCCTGTTGTGGCTCTCTATCTCTTGGACATTTACATATGGTACACCCTTTTGTCAGCCATCGTTGGTGGTGTAAAGGGTGCTCGGGCACGGTTGGGCGAGATACGTTCACTTGAAATGATGCATAAGCGTTTCGAGAGCTTTCCAGAAGCATTTGTAAATAACCTTGTCTCTACAAAGACTAAAAGTTTGCTACCCGACAGACAAGAACCTCAGGACTCTCCGGAGAGGAACAAGGCATATGCGGCAACCTTTTCTCCATTTTGGAATGAAATCATTAAAAGCTTACGTGAGGAAGACTTCATCAGCAATAGGGAGATGGACTTGCTCTCTATTCCTAGCAACGCAGGGAGCCTCAAATTGGTCCAATGGCCTTTGTTTCTATTATGTAGTAAGATATTCTTGGCTGTTGATTTGGCTTTGGATTGCCAAGATACGCAGAAAGATCTGTGGAGCAGAATATGTCGGGATGAGTATATGGAATATGCAGTTCAAGAATGCTACTACAGCGTTGAAAAAATTTTATATGCCCTAGTCGATGGTGAAGGGAGACTTTGGGTGGAAAGGATTTTTCGGGAGATCTTCAACAGTATTTCAGAGGGTTCCCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTATTACAAAAGTTTACAGCACTTACAGGGCTTTTGACTCGAAAAGAAACTCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGATGTTGTTACAAACGAGCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAATGAAGGTCGACTTTTTTCTCGGATCGAATGGCCCAAGGATCTAGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACAGTGAAGGATTCTGCAGCTAACATTCCAAAAAATCTTGAAGCAGGAAGAAGACTACAATTTTTTACAAATTCATTATTTATGGACATGCCTTTGGCAAAACCTGTCAGTGAAATGGTGCCATTCAGCGTCTTTACTCCATATTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGTATGGAAAACGAGGATGGCATTTCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTTTGGAACGAATTGGTCGAGGTCATGGCACGGGGGAGGCTGATCTCCAAAAAAGTCCAAGCGATGCTTTAGAGCTTCGATTTTGGGTTTCATATCGAGGGCAGACTCTAGCTCGGACGGTTCGTGGTATGATGTACTACAGGAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACCAACTTTTTCACGAGCCAAGGGTTTGAATTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTTACCTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCGGAGGCAACTGATATTGCTCTTTTGCTGCAAAGGAATGAGGGACTTCGTGTTGCTTTCATTCATGTGGAAGATAATGTTGGATCTGATGGGAAGGTTGTAAAGGAGTTTTATTCGAAGCTTGTGAAAGCTGATGTGCATGGAAAAGATCAGGAGGTATATTCGATCAAGCTTCCTGGAGAACCGAAGCTTGGAGAAGGGAAGCCTGAAAACCAAAATCATGCCATAGTTTTCACTCGTGGAGATGCCGTTCAAACTATTGACATGAACCAAGACAACTATCTTGAAGAGGCAATGAAAGTGAGAAATCTTCTGGAGGAATTTCATGCAAAGCATGGGCTTCGTCCTCCTACCATTCTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCATTAGCATGGTTCATGTCCAATCAAGAAACTAGCTTTGTAACCTTGGGACAACGTGTTTTGGCAAGTCCACTCAAAGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCATGAGTACATTCAGGTGGGAAAAGGAAGAGATGTTGGGTTAAACCAAATTGCCCTGTTTGAAGGGAAAGTAGCAGGTGGGAATGGAGAGCAAGTTCTCAGCAGGGATATTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTCTCATTTTATTTCACAACTGTTGGTTACTACGCATGCACAATGATGACAGTTCTTGTGGTTTATATATTCTTGTATGGACGGGTTTACTTGGCCTTTGCTGGACTTGATGAAGAAATCTCAAGAAGAGCAAAAATGTTGGGAAATACAGCATTGGATACCGCATTGAATGCCCAGTTTTTGTTTCAGATTGGAGTTTTCACTGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGATGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTGTGTTCTGTCTTCTTCACTTTCTCTTTGGGAACTAGAACTCATTATTTTGGAAGAACTATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGTAGAGGTTTCGTGGTCCAGCACATCAAATTTGCTGAAAACTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCCTATGGGTATTCAGAAGGCGGAGCAAGTTCTTTTGTTTTGCTTACTCTCAGCAGTTGGTTCCTCGTCATCTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGATGATTGGACCAGCTGGCTATTCTACAAAGGGGGAGTAGGGGTTAAGGGAGAAAACAGTTGGGAGTCATGGTGGGATGAAGAACAGGCACATATTCAAACATTGCGAGGTCGAATTTTGGAGACACTTTTGACTGTGAGGTTCTTTATATTTCAATATGGCGTAGTGTACAAACTCCATCTCACAGGAAAGGACACATCACTTGCGTTATATGGTTTCTCGTGGGTGGTGCTTGTTGGAATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATAATTCTGGTTACAGCGCTTGGTCTAATCGTTGGCTTTACTAACCTGTCAATAACCGACTTATTTGCTAGTGTTCTGGCATTTATTCCGACTGGATGGGCCATGTTATCTTTCGCAGTTACATGGAAGAGAGTAGTGAGGAGTCTAGGCTTGTGGGACTCGGTGCGTGAATTTGCGAGGATTCTCGTCTGCTCTTCAACCAAGCTTTCAGTCGTGGGCTCGAGATCTCGCTCATCCTTGCTGGAAACAAAGCTAACGTTGAAACGTACTGATTTTAGCAGAGAACACATTGGCAGCAATGTAGATAGATATTCTATTGTAGACGTTACTCAAATCTTCTGTATCATGCATTCATTTCTGAGTTGTGATTGTTAG 5790 41.83 MLGLSVVDLAPERSVMARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYKMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASINRHRDIEHLWEFYKLYKRRHRVDDIQREEQKWRESGGISANLGELEFRYSEAKKVMANLQALVEVMDALKGDADPQGVGRLIMEELRRVRSSDTTLSGEFVPYNIVPLDAQSITNAIGIFPEVRATISAIRYNEHFPTLPSQFQISGQRSADMFDLLEYIFGFQRDNVRNQREHVVLMVANAQSRLGIPDNGDPKIDEKAINEVFLKVLDNYIKWCKYLRIRLAWNSFEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDANLDHGEAVRSNNCKLEDGSVSFLQRIICPIYETLVAETERNKNGKAAHSEWRNYDDFNEYFWSPTCFELGWPMREESSFLRKPRGSKRTGKTSFVEHRTFFHLYRSFHRLWIFLAVIFQALTIFAFHNERLNLETLKAILSIGPTFAIMNFIESCLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVFVTYVYVKVLEERHTRSADNSFYFRIYIIVLGVYASLRLVFSMLLKLPACHTLSEMSDQSFFQFFKWIYQERYYVGRGLYEKLSDYCRYVAFWLVLLICKFVFAYFLQIKPLVQPTTVIANLPSLEYSWHSFISKNNNNLSTIASLWAPVVALYLLDIYIWYTLLSAIVGGVKGARARLGEIRSLEMMHKRFESFPEAFVNNLVSTKTKSLLPDRQEPQDSPERNKAYAATFSPFWNEIIKSLREEDFISNREMDLLSIPSNAGSLKLVQWPLFLLCSKIFLAVDLALDCQDTQKDLWSRICRDEYMEYAVQECYYSVEKILYALVDGEGRLWVERIFREIFNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRKETPELAKGAAKAVFELYDVVTNELLSSDLREQLDTWNILLRARNEGRLFSRIEWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEAGRRLQFFTNSLFMDMPLAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRGHGTGEADLQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFFTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQRNEGLRVAFIHVEDNVGSDGKVVKEFYSKLVKADVHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEAMKVRNLLEEFHAKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEEISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLMKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTLRGRILETLLTVRFFIFQYGVVYKLHLTGKDTSLALYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIILVTALGLIVGFTNLSITDLFASVLAFIPTGWAMLSFAVTWKRVVRSLGLWDSVREFARILVCSSTKLSVVGSRSRSSLLETKLTLKRTDFSREHIGSNVDRYSIVDVTQIFCIMHSFLSCDC 1929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 223878 256605 - CmaCh11G000500.1 Cma11g00050 302559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00050 1929 PANTHER BNAC03G35120D PROTEIN 16 1867 - -
Cma11g00050 1929 Pfam 1,3-beta-glucan synthase component 1045 1739 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cma11g00050 1929 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 16 1867 - -
Cma11g00050 1929 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 364 472 IPR026899 -
Cma11g00050 1929 SMART FKS1_dom1_2 362 475 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00050 Cma-Chr11:223878 Cma11g00821 Cma-Chr11:4029859 0 dispersed
Cma11g00822 Cma-Chr11:4076027 Cma11g00050 Cma-Chr11:223878 0 dispersed
Cma10g00075 Cma-Chr10:310701 Cma11g00050 Cma-Chr11:223878 2.31E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00050 K11000 - csv:101217890 3505.69