Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00066 | ATGGTTAAGTTTATTGGTGCCTGCAAGGACCCTGTAATGGTGATAGTAACTGAGCTCTTATTAGGAGGGACTTTACGAAAGTACCTGCTCAATATGCGCCCACGCTGCTTGGACACACATGTGGCTGTTGCTTTCGCGCTCGATATTGCTCGAGCTATGGAATGCTTGCACTCTCGTGGCATCATACACCGTGATCTGAAACCTGAGAACCTACTGTTGACTGCAGATCACAAAACAGTTAAACTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCGGAGACGGGGATGTACCGTTGGATGGCTCCCGAGTTGTACAGCTCTGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAATGTGGATGCCTATAGCTTTGCCATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCCGAGGAACTGGCTATCCTTCTAATAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTCTACACCATAGCACCCCCGAGCCGATGA | 645 | 46.67 | MVKFIGACKDPVMVIVTELLLGGTLRKYLLNMRPRCLDTHVAVAFALDIARAMECLHSRGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGMYRWMAPELYSSVTLRQGEKKHYNHNVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSADNLPEELAILLITSCWQEDANARPNFTQIIQMLLTYFYTIAPPSR | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 334910 | 336386 | - | CmaCh11G000660.1 | Cma11g00066 | 302575 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00066 | 214 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 1 | 213 | - | - | |
Cma11g00066 | 214 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 208 | IPR011009 | - | |
Cma11g00066 | 214 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 61 | 73 | IPR008271 | GO:0004672|GO:0006468 | |
Cma11g00066 | 214 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 209 | - | - | |
Cma11g00066 | 214 | ProSiteProfiles | Protein kinase domain profile. | 1 | 206 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g00066 | 214 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 202 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g00066 | 214 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 213 | - | - | |
Cma11g00066 | 214 | SMART | serkin_6 | 1 | 206 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00092 | Cma11g00066 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00066 | Cma-Chr11:334910 | Cma14g00018 | Cma-Chr14:75726 | 3.93E-109 | dispersed | |
Cma10g00092 | Cma-Chr10:373193 | Cma11g00066 | Cma-Chr11:334910 | 2.41E-146 | wgd | |
Cma11g00066 | Cma-Chr11:334910 | Cma11g01458 | Cma-Chr11:9621175 | 4.61E-128 | wgd | |
Cma11g00066 | Cma-Chr11:334910 | Cma14g00675 | Cma-Chr14:3434476 | 7.40E-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68867 | PF07714 | PK_Tyr_Ser-Thr | 2.70E-42 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00066 | - | - | csv:101223021 | 395.586 |