Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00066 ATGGTTAAGTTTATTGGTGCCTGCAAGGACCCTGTAATGGTGATAGTAACTGAGCTCTTATTAGGAGGGACTTTACGAAAGTACCTGCTCAATATGCGCCCACGCTGCTTGGACACACATGTGGCTGTTGCTTTCGCGCTCGATATTGCTCGAGCTATGGAATGCTTGCACTCTCGTGGCATCATACACCGTGATCTGAAACCTGAGAACCTACTGTTGACTGCAGATCACAAAACAGTTAAACTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCGGAGACGGGGATGTACCGTTGGATGGCTCCCGAGTTGTACAGCTCTGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAATGTGGATGCCTATAGCTTTGCCATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCCGAGGAACTGGCTATCCTTCTAATAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTCTACACCATAGCACCCCCGAGCCGATGA 645 46.67 MVKFIGACKDPVMVIVTELLLGGTLRKYLLNMRPRCLDTHVAVAFALDIARAMECLHSRGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGMYRWMAPELYSSVTLRQGEKKHYNHNVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSADNLPEELAILLITSCWQEDANARPNFTQIIQMLLTYFYTIAPPSR 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 334910 336386 - CmaCh11G000660.1 Cma11g00066 302575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00066 214 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 213 - -
Cma11g00066 214 SUPERFAMILY Protein kinase-like (PK-like) 2 208 IPR011009 -
Cma11g00066 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 61 73 IPR008271 GO:0004672|GO:0006468
Cma11g00066 214 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Cma11g00066 214 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00066 214 Pfam Protein tyrosine and serine/threonine kinase 2 202 IPR001245 GO:0004672|GO:0006468
Cma11g00066 214 PANTHER SERINE-THREONINE PROTEIN KINASE 1 213 - -
Cma11g00066 214 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00092 Cma11g00066 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00066 Cma-Chr11:334910 Cma14g00018 Cma-Chr14:75726 3.93E-109 dispersed
Cma10g00092 Cma-Chr10:373193 Cma11g00066 Cma-Chr11:334910 2.41E-146 wgd
Cma11g00066 Cma-Chr11:334910 Cma11g01458 Cma-Chr11:9621175 4.61E-128 wgd
Cma11g00066 Cma-Chr11:334910 Cma14g00675 Cma-Chr14:3434476 7.40E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68867 PF07714 PK_Tyr_Ser-Thr 2.70E-42 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00066 - - csv:101223021 395.586