Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00114 ATGTTGGTCTTTTTAGTTCATTGTAATCTTCGGCAATACCACCGCTTCATCCCGTGTCTGTATGTCTTCTTGCCTCCTATGTCGTCGCAGAAAAGAAATCCAGATGATGGAGATGCTCCGGCGGATGGTGACAATCCCGATGATAAGCGTAGGAAGTTTAGTTTCTTTCGTGTGGTTCAGGATGCTTTGTTCTCGCAATCAATGCAAAAGTTATTGGAGCCACTCATACGTAAAGTGGTAAAGGAGGAGGTTGAATTGGCGCTAAGAAAGCATATGACCAATGTGCAAAGGAATGATGAAAATGGAGGGAAAGAAATCTGTTCTTCCGAGCCAAGATGCTTTCAATTGAAGTTCATAACTGATATATCTCTCCCGGTATTCACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGAAGGTGGCTTTGATTGATACTCAAAGTGGGAAAATTGTTGACACTGAGCCACAATCCTCAGCCAAAGTGGAAATTGTAGTGCTGGAGGGTGATTTTGAGAGTGGAGTTGATAATTACACTATAGAAGAGTTTAAGAACAACATTGTTAGAGAAAGGGAAGGAAAGAAATCACTTCTTACAGGAGATACATTTGTGAACCTCAAATATGGCATTGGTTTGGTAGGTGAGATTTCTTTCACTGATAATTCTAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTTTAGACGACAATAATGAAATGAGAATACTAGAAGCAAAGACTGCATCATTCGTGGTCAGGGATCACCGTGGCGAATTGTACAAGAAGCACCATCCTCCATCTCTGCAAGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGATGGAGCGTATCATAAGCGCCTGAGCCAAGAAAAAATCAAGACGGTGCAAGATTTCCTAAGTCAACTTTATGTACAACCTTCAAGGCTTCGTAATATTCTTGGTGGCATGCCTACCAAAATGTGGGAAGCTACAATTGAGCATGCGCAGACATGTGTGCTCAATAAGAAGATTTATGTGTACAAACCTCACGATTTGGAACCGAAAAGTGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTATCTGAAACTGAAAAGGCTGATGCTCACAACTTGGTTATCTCCGCATACGAACACTGGGAACAAGTTGATTCTATGGATGATGAAACTTCTCTTGTAGGTAGCTCTTCTCAGTTCCTTTACACCCCGAGCTCACCGATGGTGGACCATTCTTATGGTATCAAGTATTTGGATTCTCCAAAATTTAGTGGCTTTGATTTCACACCATCCAATGCCTATTCTTCTGACATAATTTCATCGATGGGATCTATTGAGAATGTGAGTGGTTTGGACGATCATGCTTTGCAGGCCTTTGATTCCGTGGTAGTAAGACATGATCAGATTCCATGTTCCCCAAACTATCCCAGCTCTTCCCTGCTCTGTGATTCCGAGCCGCTAAATTCATCTTTCTTCGATGTGGATCATATGCAAGTTTTAGAGTCTGATTTCCAATGTAGCTCGATTTTAGAATCACGAGCTACTCCAAAAGGAGAAACAAACGCAGATTTGATTGATACAAAGGTGGTCGTGGAAAGGAAAAAATGGACTATGGTTGATACTGGAAAACACACTAATGTCCAGTTTAAAATGTGTGCGGTTATGACGAGAAGCTCGGGGTGGTGCGTGTTATTTGGTATGGAGACGAGGCTATGCAGTTTTTTTCTAGGTGTCTGTCTTGCTGTGCCCGTATCTGAGCCAGAAGAATTTTCTCCCTGA 1830 42.24 MLVFLVHCNLRQYHRFIPCLYVFLPPMSSQKRNPDDGDAPADGDNPDDKRRKFSFFRVVQDALFSQSMQKLLEPLIRKVVKEEVELALRKHMTNVQRNDENGGKEICSSEPRCFQLKFITDISLPVFTGARIEGRDGSNLKVALIDTQSGKIVDTEPQSSAKVEIVVLEGDFESGVDNYTIEEFKNNIVREREGKKSLLTGDTFVNLKYGIGLVGEISFTDNSSWTRSRRFRLGARILDDNNEMRILEAKTASFVVRDHRGELYKKHHPPSLQDEVWRLQKISKDGAYHKRLSQEKIKTVQDFLSQLYVQPSRLRNILGGMPTKMWEATIEHAQTCVLNKKIYVYKPHDLEPKSGVVFNVVGQVMGLLSDYQYVPIDKLSETEKADAHNLVISAYEHWEQVDSMDDETSLVGSSSQFLYTPSSPMVDHSYGIKYLDSPKFSGFDFTPSNAYSSDIISSMGSIENVSGLDDHALQAFDSVVVRHDQIPCSPNYPSSSLLCDSEPLNSSFFDVDHMQVLESDFQCSSILESRATPKGETNADLIDTKVVVERKKWTMVDTGKHTNVQFKMCAVMTRSSGWCVLFGMETRLCSFFLGVCLAVPVSEPEEFSP 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 614142 618131 - CmaCh11G001140.1 Cma11g00114 302623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00114 609 Pfam Calmodulin binding protein central domain 271 336 IPR046830 -
Cma11g00114 609 PANTHER OS02G0177800 PROTEIN 30 555 IPR012416 GO:0005516
Cma11g00114 609 Pfam Calmodulin binding protein C-terminal domain 341 402 IPR046829 -
Cma11g00114 609 PANTHER CALMODULIN-BINDING PROTEIN 60 A 30 555 - -
Cma11g00114 609 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00146 Cma11g00114 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00411 Cma-Chr10:1886214 Cma11g00114 Cma-Chr11:614142 1.76E-106 dispersed
Cma10g01153 Cma-Chr10:8180611 Cma11g00114 Cma-Chr11:614142 8.53E-56 dispersed
Cma11g00114 Cma-Chr11:614142 Cma11g00408 Cma-Chr11:1994432 1.01E-103 dispersed
Cma18g00048 Cma-Chr18:196723 Cma11g00114 Cma-Chr11:614142 3.04E-44 dispersed
Cma10g00146 Cma-Chr10:663476 Cma11g00114 Cma-Chr11:614142 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00114 - - csv:101211405 860.907