Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00115 | ATGCGCCTCTTCTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAACTCAACCGCGATCTTCCTGGTGATGCCTTTGACGTCGTCACTCGAGCGAAAATTACCTTAGAGCTCTCCTGCCCTGGCATCGTCTCTTGCTCCGACGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCGCAGGCGGACCATCGTACAAAGTTGAGTTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCAGACGTGGAAGGCAACATTCCAAAACCGAATCAATCGATCGACGAGTTGATCAAGCTATACACGGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATACGGCGGACGCACGATCGGATTCTCAAATTGCAGGGAATTCAGCGACCGGCTCTTCAACTTCGGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAGGCGTTGAAGAAGTCCTGTGCCGATTACGAGAAGAATCCAGCAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCGAGGACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTCGGAGAGGCGATGGAGAAGATGAGCGTTCGAGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGACAAGATGCGATGCGTTCAATTCAATCAACCATTAA | 816 | 50.86 | MRLFFSDCLVGGCDGSVLVSSNVFNHAERDAELNRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAAAGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCREFSDRLFNFGKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVREVKTGGKGEVRTRCDAFNSINH | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 619576 | 620391 | + | CmaCh11G001150.1 | Cma11g00115 | 302624 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00115 | 271 | PANTHER | - | 1 | 270 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 267 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 125 | 137 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 59 | 69 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 185 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 40 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 201 | 218 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 78 | 93 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Plant peroxidase signature | 241 | 254 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | Pfam | Peroxidase | 1 | 230 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | CDD | secretory_peroxidase | 2 | 266 | IPR033905 | GO:0004601|GO:0042744 | |
Cma11g00115 | 271 | Gene3D | Peroxidase, domain 2 | 104 | 246 | - | - | |
Cma11g00115 | 271 | PANTHER | PEROXIDASE 41 | 1 | 270 | - | - | |
Cma11g00115 | 271 | Gene3D | - | 1 | 267 | - | - | |
Cma11g00115 | 271 | SUPERFAMILY | Heme-dependent peroxidases | 1 | 267 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Haem peroxidase superfamily signature | 187 | 202 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Haem peroxidase superfamily signature | 78 | 90 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Haem peroxidase superfamily signature | 60 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g00115 | 271 | PRINTS | Haem peroxidase superfamily signature | 126 | 141 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00115 | Cma-Chr11:619576 | Cma11g00189 | Cma-Chr11:967469 | 0 | dispersed | |
Cma11g01161 | Cma-Chr11:6725930 | Cma11g00115 | Cma-Chr11:619576 | 0 | transposed | |
Cma10g00148 | Cma-Chr10:676861 | Cma11g00115 | Cma-Chr11:619576 | 1.24E-164 | wgd | |
Cma11g00115 | Cma-Chr11:619576 | Cma13g00904 | Cma-Chr13:7246240 | 4.53E-135 | wgd | |
Cma11g00115 | Cma-Chr11:619576 | Cma18g00148 | Cma-Chr18:760016 | 1.54E-128 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00115 | K00430 | - | csv:101213178 | 454.521 |