Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00123 | ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATATCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCCCGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCGTCTTTCATGGTTTTCAACTTCAGAGAAGGTGGTAAGCGAAGTCAAGTTTCTGATGTACTGAGTCAGTATGACATGACAGTTATGGACTATCCCCGGCAATATGAGGGATGTCCTTTATTGCCATTGGAGATGGTTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGCAGGGTCAACAGAATGTGTTATTGATGCATTGTGAAAGGGGGGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGAAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTATCTCCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAACTTAGGTTCTAATTGGCCTCCAGCAGATACACCCCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAAGGGTGTAGGCCTGTTGTGCGTGTCTATGGTCAAGACCCCTCAATACCGGCCGATAGAACTTCAAAGCTTTTATTTTCAACATCTATCAACAGAAAATATATCCGAAACTACCAACAGGAAGAGTGTATGCTGGTGAAAGTTGATATTAATTGCCATATTCAAGGGGACGTAGTTGTTGAATGCATCCATTTGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAATATTATAATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCAAGGGACCAGCTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGGTGCTGATGCTGATGTCGTTGTCCCCAATCTTACCACAACCTTTGATGATGATGATGAAGATGAAAATGAAGCTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATTTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGATCCAATCATCCTCAATTGATCAATCGTGCAGACCGTAAAGCAGATTGGAAGGAGGACTTTGATCCGCCTGCATTCCAAGATTGTGCAACGGATGATGGAAATCTCAAGCATGTGAAGAAATCAGATTTTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCCGACCTTAATGCTGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCCTGGTTGCTGCTGCTAATGTCTTGACTCATGTGAAAGCCCAGGGGTTGGTAGATGCCGCATATGGAAAAGTTGAAGATAATGAAGAAAAGGATGATGGAAGAGATGCTGCACCTGCGAAATTGGGAAACAAGGTTCTGCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACTGCCTATTCCAAGTGGAAAACCTACCACTGATATGGTTTCAGCCAAACAGAAAGTCAAGCAACAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGTTTCTAGGTGGATTCCTCCTAACAAAGGCTCTTATATGAACTCTATGCATGTTTCCTATCCTCCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCCAGTATTGCACCATCAAAGGATACAAGTGCAAATTCCAAAACAAAGGGTTCTGCCACCCTTGATTCTCTGGTTTCTACATATTTATTTAGTGAACGAAAAAATCAAAAAGTGGATTCTGCATGGTCTTCACACTCTGCACCTGGGGAACTCATGCTTGGCGCACCATCTCCAGTTGAGTCAATTGAGGAAGCAGATTCTTCCTCTGAAACTCCAAAACCATCACAAAGTGATTCACAACTTGAAGTAACACCTCCTCCCCTTCCCACAAAACCTCCATCTCCACATTTACCATCACTCCCCAGTGCAAATGCAATACCTCCTCCACCTCCTCCACCACCCCCATCCTTGCACCATATGGAGTCGACATACTCTGTTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATTGCTAACTCATCAAAGGCAGTGACTCCCCCTCTCCCTCCCCCTCCTCCTCCATTCAGTAGGCAGAACAGTGAGATGCTTTTGCCCATTTCTTCTACACAGTCATCATGGGAGCAAAGATATTTTTCTGTTTCTAGTGTAAAGGTGGCTGGTTCTGTACCTCCTCCACCTGCACCCCCATCTCGACCTCGACCTCACTCTGTGGCCTTGCCATCTACATTAAAGAATATTGCAAGTATTCCTCGTGTACCTGTTGTATCTCCTCCTTCAGCATTTCTTTCATTGGCATATAAAGGTATATTGCTATCATCACCCCCACCTCCCCCTCTTTCTAGGATACATGAACTACTTGCTCCACCATCTTCACCACACCTGCCTGCTCCAATATATGGTGGTAAAACACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCCCCACCCCCATTAATGCAAGGGGCACTTCCTTCACCATCTCCAGGGGAAGGAACTCCATCCCCACCCACGCATGGTGTATCTCCAACACTACCTTTATTACATGGAGCACCACAGCCTCCCCCACCACCTCCTCCCCCACCACCTTCAATTTATGGAGCACCTCCTCCTCCACCCCTTCCAATGTTTGGAGCACCCCCTCCTTTGATCCCTCCCATGCAAATGCAGAGGAGACCTCCTACACCTCCTCCTCCGCCTCCAATGCATGGGTCTCCTCCACCAATGAATGCAACTCCTCCACCACCACCGCCTCCCATACGTGGGGCTTCTCCACCACCCCCACCTCCACTAATGCATGTGGCTCCTCTACCATCGCCACCGCCACCAATGCTTGGGAATCCTCCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCAATGCACGGGAATCCTCCACCACCCCTGCCACCTCCACCAATGCATGGTGCTCCTCCACCACCCCCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCCTCGCCACCTCCACCAATGCAAGGGAATCCTCCACCACCTACCCCTCCACCAATGTGTGGGGCTCCTCCACCCCCACCGCCACCCTCAGCCGGGTATGGTGGAGCCCCACCACCACCTCCCCCACCCGTGGGTGGTGGAGTCCCCGCACCCCCTCCACCACCCTGGGTTGGTGGAGCTCCCGCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCTGCACCCCCTCCTCCTCCAGGTGGTCATGCTCCAGCCCCACCTGGACCTCCAGGTGGTGGACCTCCTCCACCTCCACCACTAGGTTCAAAAGGAGGAGCTGTTGCACCTCCTGACCCAAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTAACACGCTCAGCTACTTCTGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAGGTTACAAGAGCTCTGCAAGGGAGCTTATGGGAAGAACTACAGAGATATGGCGAGACTCAAATTGCATCAGAGTTTGATGTGACCGAGATAGAGACTCTCTTTTCTGCAACTGTTTCCAAACCTGCTGATGGAGGCAAATCTCGAAGGAAGTCTGCTGGATCCAAAACTGACAAAGTTCATCTGATTGACCTCAGAAGAGCTAACAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGATGAATCAGTATTAGACGTTGATCAGGTGGAAAATCTCATAAAGTTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGGGTAGAGTCAAAGATGAAAGTGTTTTCTTTTAAGATTCAGTTCGGCTCTCAGTTATCAGAATTTAAGAAGAGTTTGAATACTGTCAACTCGGCTTGTCATGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACGGCGAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCAGCTCTTCTTAAATTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCGGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAATTTGTTGCTTCTGAAAATGATGGCCCAGTCTCTGAAATTTTTCGAAAGACGTTGAAAGAATTCATTGCTACTGCTGAGACAGAGGCGGCGTCGGTGACAAATCTGTACTCTGTTGTGGGTAGAAATGCAGACGCACTTGCATTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTATAGTGACATTGTTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAATCCGATAAGGATGCTGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGCGTGAAATAG | 4863 | 47.25 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSPEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGKRSQVSDVLSQYDMTVMDYPRQYEGCPLLPLEMVHHFLRSSESWLSLQGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSNWPPADTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSIPADRTSKLLFSTSINRKYIRNYQQEECMLVKVDINCHIQGDVVVECIHLDEDLVHEEMMFRVMFHTTFVRSNIIMLNRDEVDVLWDARDQLPKDFRVEALFLGADADVVVPNLTTTFDDDDEDENEAGAASPEEFFEVEEIFSNAMDGQEAKGSNHPQLINRADRKADWKEDFDPPAFQDCATDDGNLKHVKKSDFDAVKDIAVDDVKYKLDENIYSDLNAVKDIAVDDGDMNSNSFLVAAANVLTHVKAQGLVDAAYGKVEDNEEKDDGRDAAPAKLGNKVLQKKLSADGSRQKSEKLQTPIPKKLPIPSGKPTTDMVSAKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIAPSKDTSANSKTKGSATLDSLVSTYLFSERKNQKVDSAWSSHSAPGELMLGAPSPVESIEEADSSSETPKPSQSDSQLEVTPPPLPTKPPSPHLPSLPSANAIPPPPPPPPPSLHHMESTYSVPPLSVSLAPPPIANSSKAVTPPLPPPPPPFSRQNSEMLLPISSTQSSWEQRYFSVSSVKVAGSVPPPPAPPSRPRPHSVALPSTLKNIASIPRVPVVSPPSAFLSLAYKGILLSSPPPPPLSRIHELLAPPSSPHLPAPIYGGKTPPPITSVHSAPPPPPPLMQGALPSPSPGEGTPSPPTHGVSPTLPLLHGAPQPPPPPPPPPPSIYGAPPPPPLPMFGAPPPLIPPMQMQRRPPTPPPPPPMHGSPPPMNATPPPPPPPIRGASPPPPPPLMHVAPLPSPPPPMLGNPPPPPPPPPPPPPPMHGNPPPPLPPPPMHGAPPPPPPPPPMHGNPPPPSPPPPMQGNPPPPTPPPMCGAPPPPPPPSAGYGGAPPPPPPPVGGGVPAPPPPPWVGGAPAPPPPPGGGGAPPPPPPPGGGGAPAPPPPPGGHAPAPPGPPGGGPPPPPPLGSKGGAVAPPDPRGLSAGRGRGLTRSATSAPRRSSLKPLHWSKVTRALQGSLWEELQRYGETQIASEFDVTEIETLFSATVSKPADGGKSRRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKMKVFSFKIQFGSQLSEFKKSLNTVNSACHEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLKFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVRQEFVASENDGPVSEIFRKTLKEFIATAETEAASVTNLYSVVGRNADALALYFGEDPARCPFEQVIVTLLNFMRLFRKAHEENCKQAELEKKKSDKDAEMENAKGISLTKKSVK | 1620 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 655413 | 671728 | + | CmaCh11G001230.1 | Cma11g00123 | 302632 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00123 | 1620 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 205 | IPR029021 | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 795 | 815 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 1593 | 1620 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 1593 | 1610 | - | - | |
Cma11g00123 | 1620 | PANTHER | FORMIN-J | 1063 | 1612 | - | - | |
Cma11g00123 | 1620 | PANTHER | FORMIN-J | 1 | 1070 | - | - | |
Cma11g00123 | 1620 | Coils | Coil | 1583 | 1603 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 671 | 693 | - | - | |
Cma11g00123 | 1620 | CDD | PTP_PTEN-like | 16 | 190 | - | - | |
Cma11g00123 | 1620 | SMART | PTEN_C2_2 | 198 | 1320 | IPR014020 | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 694 | 727 | - | - | |
Cma11g00123 | 1620 | PRINTS | Proline rich extensin signature | 799 | 811 | - | - | |
Cma11g00123 | 1620 | PRINTS | Proline rich extensin signature | 865 | 886 | - | - | |
Cma11g00123 | 1620 | PRINTS | Proline rich extensin signature | 892 | 908 | - | - | |
Cma11g00123 | 1620 | PRINTS | Proline rich extensin signature | 911 | 928 | - | - | |
Cma11g00123 | 1620 | PRINTS | Proline rich extensin signature | 930 | 955 | - | - | |
Cma11g00123 | 1620 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 798 | 812 | - | - | |
Cma11g00123 | 1620 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1284 | 1609 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 926 | 1189 | - | - | |
Cma11g00123 | 1620 | Gene3D | - | 206 | 336 | - | - | |
Cma11g00123 | 1620 | Coils | Coil | 1489 | 1509 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 867 | 919 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 497 | 554 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 732 | 748 | - | - | |
Cma11g00123 | 1620 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 336 | IPR014020 | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 750 | 768 | - | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 644 | 773 | - | - | |
Cma11g00123 | 1620 | Gene3D | Formin, FH2 domain | 1207 | 1594 | IPR042201 | - | |
Cma11g00123 | 1620 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1210 | 1608 | IPR015425 | - | |
Cma11g00123 | 1620 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
Cma11g00123 | 1620 | SMART | it6_source | 539 | 1618 | IPR015425 | - | |
Cma11g00123 | 1620 | Pfam | Formin Homology 2 Domain | 1215 | 1582 | IPR015425 | - | |
Cma11g00123 | 1620 | MobiDBLite | consensus disorder prediction | 854 | 1220 | - | - | |
Cma11g00123 | 1620 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma11g00123 | Cma13g01093 | CCT | |
Cma10g00209 | Cma11g00123 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00123 | Cma-Chr11:655413 | Cma13g01093 | Cma-Chr13:8230983 | 0 | dispersed | |
Cma01g00804 | Cma-Chr1:4326581 | Cma11g00123 | Cma-Chr11:655413 | 0 | wgd | |
Cma10g00209 | Cma-Chr10:925548 | Cma11g00123 | Cma-Chr11:655413 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00123 | - | - | cpep:111792358 | 1579.69 |