Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00139 | ATGGCCACCGTCACCACTCAAGCTTCCGCCGCCGTTTTACGGCCATTCGCCTCCCGATCGAGGTTCCTTACTGGGTCTTTCGGTAAACTCCACCGTGAGCTGTCGGTTAAACCGGTGGCTGCTTCATCGCCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGCGTACTTAAATGGCAGTCTTGCAGGCGACAACGGATTCGACCCACTGGGTTTAGCGGAGGACCCAGAGAATCTGAGGTGGTTCGTGCAAGCGGAGCTCGTGAACGGGCGGTGGGCGATGCTGGGTGTGGCCGGAATGCTTCTGCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCACCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCATCTTCAACTCTGTTCGTGATCGAGTTCATCCTGTTCCATTACGTCGAAATCCGGAGATGGCAGGACATTAAAAACCCAGGAAGCGTGAACCAAGATCCCATTTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGGTACCCTGGTGGTATTTTCAACCCCCTGAACTTCGCTCCCACTCTTGAAGCCAAAGAGAAGGAAATCGCCAATGGGAGGCTTGCAATGTTGGCGTTTTTGGGGTTCATCGTGCAACATAATGTGACCGGAAAGGGGCCATTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTCCAGACATTCAGTGGCAACTAA | 759 | 52.57 | MATVTTQASAAVLRPFASRSRFLTGSFGKLHRELSVKPVAASSPSSFKVEAKKGEWLPGLPSPAYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 750299 | 751773 | + | CmaCh11G001390.1 | Cma11g00139 | 302648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00139 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
Cma11g00139 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Cma11g00139 | 252 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 252 | - | - | |
Cma11g00139 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 252 | IPR001344 | GO:0009765|GO:0016020 | |
Cma11g00139 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02584 | Cma-Chr4:17715041 | Cma11g00139 | Cma-Chr11:750299 | 6.40E-49 | dispersed | |
Cma10g00197 | Cma-Chr10:888640 | Cma11g00139 | Cma-Chr11:750299 | 2.25E-140 | dispersed | |
Cma11g00139 | Cma-Chr11:750299 | Cma18g00694 | Cma-Chr18:6352027 | 1.48E-75 | dispersed | |
Cma11g00139 | Cma-Chr11:750299 | Cma01g00793 | Cma-Chr1:4282436 | 6.68E-160 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00139 | K08910 | - | csv:101222701 | 473.011 |