Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma11g00144 | ATGGCGGAAGAGACAATCCCTCAACTCGCAGAAAACGGTCCGGAGGTAACCAACTCCGCCGCCGAAGATATGGAACTTGAAAGCACAGAGCCGAAAGTATCAGGTGGTGATTCTGATGCAAACGAGGCCGCTCCAGTAACGAATGGTGATGCTAATTCCAAGCGTGAGAGGGAGGAAGAAGGCGCCGGTGACTATGTCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCGGTTGAAGAGGAAAGGCTTGAGAAGGTGGAAAGAGATGGGAAAGGCGAGGAAGAGCATGGTCCTGTGAGTTTAGGCCCGAAGAGCTTTGGATCATCGGTGGAGTTGTTCGAATACTTCTACAACTTTCTTCACTACTGGCCTGCCAACTTGAACGTGAACCAGTACGAGCTGATGGTGTTGCTGGATTTGATTAAGAAGGGGCATGTCGAACCGGACAAAAAGATCGGCTGTGGTGTTCGCGCTTGCCAAATTCGATACCATCCCATGTGGAAAAGCAAGTGCTTCTTCCTGATTCGGGAGGATGGGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCACTGCCTGAAAACTTGAAGACGATATCTGATGCAAACAGGGCATTGGGTGGTGGTAAGCACCGCGTTTTCACCACATTGGAGTGGTGGAGTCAGTTTGTTTTCCTGCTAAGAATTTACGACCAAATCCCCCCAGCCCTCATGGCTCTTGTCCTCAAGGTCAGGGAAGAAGTTAGAGAAATGATTTGCTTACGCCCATAA | 783 | 49.94 | MAEETIPQLAENGPEVTNSAAEDMELESTEPKVSGGDSDANEAAPVTNGDANSKREREEEGAGDYVGEAKKPKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFEYFYNFLHYWPANLNVNQYELMVLLDLIKKGHVEPDKKIGCGVRACQIRYHPMWKSKCFFLIREDGSADDFSFRKCVDHILPLPENLKTISDANRALGGGKHRVFTTLEWWSQFVFLLRIYDQIPPALMALVLKVREEVREMICLRP | 260 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 769297 | 770944 | - | CmaCh11G001440.1 | Cma11g00144 | 302653 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma11g00144 | 260 | PANTHER | - | 17 | 214 | IPR044673 | - | |
| Cma11g00144 | 260 | PANTHER | PROTEIN EMBRYO DEFECTIVE 514 | 17 | 214 | - | - | |
| Cma11g00144 | 260 | MobiDBLite | consensus disorder prediction | 51 | 98 | - | - | |
| Cma11g00144 | 260 | Gene3D | - | 95 | 193 | - | - | |
| Cma11g00144 | 260 | MobiDBLite | consensus disorder prediction | 1 | 101 | - | - | |
| Cma11g00144 | 260 | Pfam | Protein of unknown function (DUF3223) | 119 | 190 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cma10g00190 | Cma11g00144 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma11g00144 | Cma-Chr11:769297 | Cma06g00714 | Cma-Chr6:3584345 | 6.24E-06 | dispersed | |
| Cma11g00144 | Cma-Chr11:769297 | Cma10g00190 | Cma-Chr10:865735 | 2.73E-102 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma11g00144 | - | - | csv:105436339 | 322.398 |