Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00166 | ATGGATGAAAAGGGCGAGAAGCCTGAGGTTTTGGAAGCTGTATTGAAGGAAACTGTGGACTTGGAAAATATACCCATTGAGGAGGTTTTTGATAATTTGAGATGCGGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGCACGGCTTGTTATTTTTGGTCTCAACAAGCTTGAGGAGAAGAAGGAAAGTAAATTCTTGAAATTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTAATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTATCGCACTGTTGCTTATCAACTCAACAATTAGTTTTATTGAGGAAAACAATGCCGGAAACGCTGCAGCTGCACTAATGGCTAGTTTAGCTCCCCAAGCCAAGATTCTTCGGGATGGAAGGTGGAGTGAGCAAGATGCTGCGGTTTTAGTTCCTGGTGATATTATAAGCATCAAACTTGGGGACATTATTCCAGCTGATGCTCGTCTTCTTGAGGGAGATCCATTGAAAATTGATCAGTCTGCTCTTACAGGTGAATCTCTTCCTGTTACAAAAGGTCCTGGCGATGGCATATACTCTGGTTCTACTTGCAAACAAGGCGAGATTGAAGCGGTTGTTATTGCCACTGGTGTTCATACTTTCTTTGGCAAGGCTGCTCACCTTGTTGACACCACCAATCAAGTGGGTCACTTCCAAAAGGTCTTAACTGCAATAGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGGGAATATCGTCCTGGAATTGACAATCTTCTTGTGCTTCTGATTGGAGGAATTCCAATTGCCATGCCCACAGTCCTCTCTGTGACAATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCCATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGACAAGACTGGAACACTGACATTAAACAAGCTCACTGTTGACAAAAATCTTGTTGAGGTTTTTGTTAAAGGAGTGGATGTGGATACTGTGGTTCTAATGGCAGCCCGGGCGTCAAGAACAGAGAACCAAGATGCTATTGATACTGCCATTGTTGGGATGCTTGCTGACCCAAAAGAGGCTCGTGCTGGTATTCAAGAAGTACACTTCCTTCCATTTAACCCTACTGATAAGCGGACTGCATTGACTTACTTAGATCGTGAGGGTAAAATGCATAAAGTCAGCAAAGGTGCACCAGAGCAGATTCTGAACCTTGCATACAATAGGTTGGATATTGAGCGCAAAGTTCATGCTGTGATTGACAAGTTTGCAGAACGAGGTTTACGCTCGCTTGCTGTGGCATACCAGGAAGTTCCAGATGGTAGAAGGGAAAGTGCTGGAGCTCCATGGCAGTTTATTGGCCTTCTGCCACTTTTCGACCCACCAAGGCATGACAGTGCAGAGACAATAAGGAGGGCGTTAAATCTTGGAGTGAATGTGAAGATGATTACTGGTGACCAGTTGGCCATAGGAAAGGAAACCGGACGACGATTAGGGATGGGAACCAACATGTATCCCTCATCTGCTTTATTGGGCCAAAACAAGGACGAGTCAATTGCTGCTTTACCGGTTGATGAACTGATAGAAAAAGCTGATGGCTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGCCTGCAGGCGAGGAAACATATCTGTGGGATGACTGGGGATGGAGTAAATGATGCTCCAGCCCTTAAAAAAGCTGACATAGGCATAGCTGTCGCCGATGCTACTGATGCTGCTCGTAGTGCTTCAGACATAGTCCTCACAGAGCCTGGTCTGAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTTCAGAGGATGAAAAATTACACTATATATGCAGTTTCAATCACTATTCGTATAGTGCTTGGTTTCATGTTGCTGGCTCTTGTATGGAAATTTGACTTCCCACCTTTTATGGTGCTCATCATTGCCATTCTCAATGATGGTACAATAATGACGATATCGAAGGATAGAGTGAGACCATCTCCGTTGCCTGATAGCTGGAAGATGGGTGAAATTTTTACCACTGGCATTATACTTGGTGGCTACTTGGCAATGATGACTGTGATCTTCTTTTGGGCAGCCTATAAAACAGACTTCTTTCCACGAGTGTTTGGGGTAGCAACTCTCGAGAAAACTGCTCACGATGACATTAGGAAACTTGCCTCAGCAGTGTATCTGCAAGTTAGCACTATAAGTCAGGCTCTCATATTTGTTACACGTTCGCGAGGTTGGTCATATGTGGAACGCCCTGGGTTATTATTGGTTGCAGCTTTTCTGGTTGCGCAGCTGATTGCTACATTAATTGCGGTTTATGCAAACTGGAGCTTTGCTGCTATTGAAGGAATTGGATGGGGTTGGGCTGGTGTTATCTGGCTTTACAACATTATCTTTTACATCCCACTTGATATCATAAAATTCATCATACGATATGCTTTGAGTGGGAGGGCTTGGGATCTTGTTATTGAACAAAGGATTGCCTTTACGAGGCAAAAGGATTTCGGGAAGGAACAACGGGAGCTACAATGGGCTCATGCACAAAGAACATTACATGGATTGCAAGCACCCGATGCGAAGTTCCACGACCGAAATCACTTCACCGAGCTCAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCTGAAATTGCAAGGTTGAGGGAACTCCACACCCTGAAAGGCCATGTTGAATCAGTGGTGAGGATGAAAGGACTGGACATAGACACAATTCAGCAAGCTTACACAGTGTGA | 2877 | 44.66 | MDEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCGKEGLTTAAAEARLVIFGLNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKGVDVDTVVLMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYLDREGKMHKVSKGAPEQILNLAYNRLDIERKVHAVIDKFAERGLRSLAVAYQEVPDGRRESAGAPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALVWKFDFPPFMVLIIAILNDGTIMTISKDRVRPSPLPDSWKMGEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDIRKLASAVYLQVSTISQALIFVTRSRGWSYVERPGLLLVAAFLVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDIIKFIIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKFHDRNHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRMKGLDIDTIQQAYTV | 958 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 856024 | 861698 | - | CmaCh11G001660.1 | Cma11g00166 | 302675 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00166 | 958 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 6 | 938 | - | - | |
Cma11g00166 | 958 | SFLD | Haloacid Dehalogenase | 316 | 644 | - | - | |
Cma11g00166 | 958 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 86 | IPR004014 | - | |
Cma11g00166 | 958 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 336 | 342 | IPR018303 | - | |
Cma11g00166 | 958 | Gene3D | - | 137 | 221 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 184 | 198 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 334 | 348 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 488 | 499 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 510 | 520 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 593 | 612 | - | - | |
Cma11g00166 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 616 | 628 | - | - | |
Cma11g00166 | 958 | SUPERFAMILY | Calcium ATPase, transduction domain A | 137 | 234 | IPR008250 | - | |
Cma11g00166 | 958 | PANTHER | PLASMA MEMBRANE ATPASE 1 | 6 | 938 | - | - | |
Cma11g00166 | 958 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 39 | 815 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cma11g00166 | 958 | SFLD | p-type atpase | 316 | 644 | IPR044492 | - | |
Cma11g00166 | 958 | Gene3D | - | 331 | 630 | IPR023214 | - | |
Cma11g00166 | 958 | Pfam | E1-E2 ATPase | 135 | 313 | - | - | |
Cma11g00166 | 958 | SMART | Cation_ATPase_N_a_2 | 20 | 92 | IPR004014 | - | |
Cma11g00166 | 958 | Gene3D | - | 907 | 958 | - | - | |
Cma11g00166 | 958 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 568 | 673 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 106 | 351 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | Gene3D | - | 99 | 824 | - | - | |
Cma11g00166 | 958 | SUPERFAMILY | HAD-like | 330 | 640 | IPR036412 | - | |
Cma11g00166 | 958 | Pfam | haloacid dehalogenase-like hydrolase | 330 | 607 | - | - | |
Cma11g00166 | 958 | CDD | P-type_ATPase_H | 39 | 850 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cma11g00166 | 958 | Gene3D | - | 346 | 493 | IPR023299 | GO:0000166 | |
Cma11g00166 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 450 | 468 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 565 | 581 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 593 | 609 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 624 | 649 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 769 | 790 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma11g00166 | 958 | Coils | Coil | 909 | 929 | - | - | |
Cma11g00166 | 958 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 856 | IPR023298 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00176 | Cma11g00166 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00166 | Cma-Chr11:856024 | Cma12g00291 | Cma-Chr12:1492694 | 0 | dispersed | |
Cma10g00176 | Cma-Chr10:803743 | Cma11g00166 | Cma-Chr11:856024 | 0 | wgd | |
Cma11g00166 | Cma-Chr11:856024 | Cma13g00925 | Cma-Chr13:7347211 | 1.62E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00166 | K01535 | - | csv:101217264 | 1741.09 |