Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00168 ATGGAAGTTATTGGGTTTATGACCAACAAATGGGTTGCAACGGCCATCGGGATTTGGATCCAATGCATCTGTGGTGCTTCCTACACCTTCAGCATCTATTCTTCGGCTCTCAAATCCACTCAGGGCTACGATCAATCCACCCTCGACACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTCATTTCTGGTTTTCTTTACTCCGCCGTTACTCCCGCCTCCCGTCGACGTAGCTCCGTTGGCCCATGGGTGGTTCACGCGGCGGGAGCGATTCAATGCTTCCTCGGTTATATTTTCATCTGGGCGGCGGTCTCTGGATTGATTGATCGGCCACCGGTGCCTGCGATGTGCTTCTTCATGTTCCTGGCTGCTCATGCGCAAACGTTTTTCAATACGGCGAACGTTGTGACTGGCGTTCACAATTTTGCGCACCATAGCGGGACTATTGTGGGCATCATGAAGGGATATCTTGGTCTTAGTGGAGCACTGCTAATCCAAGTTTATAACACGGCGTGCAATGGAGATCCAAGCAATTTTGTCCTCATGTTGGCTGTTTTCCCCACACTTCTATCCATCATGTTCATGTGGTTTGTTAGAATTGATAGAACAGAGTCTAGAAATGAGATGAAGCATTTGAACTCACTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTCATAATTTTCAACAACACTTTCTCCCTTTCATCATGGACTCGTTTTGTTACATTCTCCATACTCTTGGTTCTCCTTGTTGCTCCTCTTGGAATCGCCATTAACGCTCAGAGGGAGGACTTTAGAATGTCATCTCCCTCATTTTTCACTGAAGAAAACCCTGTTCTTAACAAGCCCAAGTCAGCGAATGCAGAGGATTCTGTTGAATATCATGAGCTGCCCAGTGATGAGTTGCAGACAATGGCTGCTGCAAACTCCAGAGCTCCCCGAGCCATGAATGTCTTGGAAGCTTTACGTACTTTGAACTTCTGGCTTCTGTTTGTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACCATAAACAACATGAGCCAACTTGGCCAATCTCTTGGCTACACAGCAACAGAGACGAAAACATTTGTGTCCTTGTGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTACATTCATATGGCTGGGCGAGGCCATTGTTAATGGCCATCACTCTTCTGATAATGAGTGGTGGCCACATTGTAATTGCCTCTGGTTTCTCTGGAAATCTGTACGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAGTGGTCGCTGATGCCCACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGAACTATTTTCAACACCATAGCCATAGCCAGCCCTCTGGGGTCTTACATTTTCTCTGTTCGGGTCATCGGTTACATTTACGACAGAGAAGCTGCCGAAAAACATGGCTCCTGCTCCGGCACACACTGTTTTGTGGTATCTTTTCTGGTCATGGCCATTGTGGCTTTCTTGGGCTCTCTTGTTGCTGCTGCTCTCTTCTTTCGAACTAGGAGATTTTACCGACTGGCTTTGCAAAGAAGAGTGGAACGTCTCAGTTAA 1632 47.0 MEVIGFMTNKWVATAIGIWIQCICGASYTFSIYSSALKSTQGYDQSTLDTVSVFKDIGANAGVISGFLYSAVTPASRRRSSVGPWVVHAAGAIQCFLGYIFIWAAVSGLIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHHSGTIVGIMKGYLGLSGALLIQVYNTACNGDPSNFVLMLAVFPTLLSIMFMWFVRIDRTESRNEMKHLNSLSALAVIVAFYLMVVIIFNNTFSLSSWTRFVTFSILLVLLVAPLGIAINAQREDFRMSSPSFFTEENPVLNKPKSANAEDSVEYHELPSDELQTMAAANSRAPRAMNVLEALRTLNFWLLFVAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLLIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAEKHGSCSGTHCFVVSFLVMAIVAFLGSLVAAALFFRTRRFYRLALQRRVERLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 880213 882461 + CmaCh11G001680.1 Cma11g00168 302677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00168 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Cma11g00168 543 SUPERFAMILY MFS general substrate transporter 6 204 IPR036259 -
Cma11g00168 543 CDD MFS_Mch1p_like 10 516 - -
Cma11g00168 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 541 - -
Cma11g00168 543 Pfam Nodulin-like 10 263 IPR010658 -
Cma11g00168 543 Gene3D MFS general substrate transporter like domains 323 532 IPR036259 -
Cma11g00168 543 PANTHER F25A4.25 PROTEIN 7 541 - -
Cma11g00168 543 Pfam Major Facilitator Superfamily 335 528 IPR011701 GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00171 Cma11g00168 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00168 Cma-Chr11:880213 Cma15g00501 Cma-Chr15:2251275 1.03E-107 dispersed
Cma11g00168 Cma-Chr11:880213 Cma11g00169 Cma-Chr11:882867 4.26E-64 tandem
Cma10g00171 Cma-Chr10:771181 Cma11g00168 Cma-Chr11:880213 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00168 - - csv:101216789 951.429