Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00186 ATGAATGCGTGTTTCGAATACAACTTATGCAGGCGTTTTGATCTGAGTTTCATGAACTTCCATCCAAAACGATTTGAGGAGGAAACCTCTCCCATCCACCCACCTGGCACTTGCACAACAAGACCTTGCAATGGGTTTGATTCAGTCATGAATGGCAAGAATTTGAAGCCCCATTCATCCCCTCCGTTTTCCTCACACCGCAATTGCTTCCTTCTTCCTCCTCACCACACTACACACACCCCTTCCACTTTTCCACATCCAGAGGAAGCAGGTTTCCCCCCGCCTCCTTCCTCTGCCGCCATGGCCTTCTTTCACTCTCCCGCTCTTCTTCTTCTACTTTTCCTATCCCTTCCATTCTCAGTTCAATCTCAGCTTTCTCTCCATTATTACCAGAAGACTTGCCCGGATTTTCCACAAATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACGGCCGCTGCATCTATGCGCCTCTTCTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAACTCAACCGCGATCTTCCTGGTGATGCCTTTGACGTCGTCACTCGAGCGAAAATTACCTTAGAGCTCTCCTGCCCTGGCATCGTCTCTTGCTCCGACGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCGCAGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCAGACGTGGAAGGCAACATTCCAAAACCGAACCAATCGATCGACGAGTTGATCAAGCTATACACGGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATACGGCGGACGCACGATCGGATTCTCAAATTGCAGGGAATTCAGCGACCGGCTCTTCAACTTCGGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAGGCGTTGAAGAAGTCCTGTGCCGATTACGAGAAGAATCCAGCAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCGAGGACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTTGGAGAGGCGATGGAGAAGATGAGCGTTCGAGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGACAAGATGCGATGCGTTCAATTCAATCAACCATTAG 1293 50.19 MNACFEYNLCRRFDLSFMNFHPKRFEEETSPIHPPGTCTTRPCNGFDSVMNGKNLKPHSSPPFSSHRNCFLLPPHHTTHTPSTFPHPEEAGFPPPPSSAAMAFFHSPALLLLLFLSLPFSVQSQLSLHYYQKTCPDFPQIVHDTVARKHATSPVTAAASMRLFFSDCLVGGCDGSVLVSSNVFNHAERDAELNRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAAAGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCREFSDRLFNFGKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVREVKTGGKGEVRTRCDAFNSINH 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 953744 955842 + CmaCh11G001860.1 Cma11g00186 302695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00186 430 Pfam Peroxidase 148 389 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PANTHER PEROXIDASE 41 108 429 - -
Cma11g00186 430 CDD secretory_peroxidase 124 425 IPR033905 GO:0004601|GO:0042744
Cma11g00186 430 PRINTS Haem peroxidase superfamily signature 219 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Haem peroxidase superfamily signature 156 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Haem peroxidase superfamily signature 346 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Haem peroxidase superfamily signature 237 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Haem peroxidase superfamily signature 285 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 Gene3D - 128 426 - -
Cma11g00186 430 PANTHER - 108 429 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 Gene3D Peroxidase, domain 2 263 405 - -
Cma11g00186 430 ProSiteProfiles Plant heme peroxidase family profile. 124 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 SUPERFAMILY Heme-dependent peroxidases 124 426 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 400 413 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 134 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 158 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 218 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 344 359 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 360 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 199 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00186 430 PRINTS Plant peroxidase signature 284 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00186 Cma-Chr11:953744 Cma11g01116 Cma-Chr11:6277923 0 dispersed
Cma11g00186 Cma-Chr11:953744 Cma11g00189 Cma-Chr11:967469 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00186 K00430 - csv:101213178 522.702