Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00189 ATGAGCCTCCATGATGCTCTTGACCTTGGGCGAGAAGAGGGAGTAGACGGTGGACTGTCTTTTGGCAACTTCAAGCTGAGCCTTGCCGTCGGCGTAGGCGACGACGATGGACGAAGGATCGGAAAGGTTCCGGTTATGGCGGAAGCCGTCAACGGCGCGTCGTTTGGCGTACTCTCTGATGTTGTAATCACAGAAGTGACGAGCTGTACGGAGCAGAGAGCGAAGAAGCGAAAGGGATTCGGATCTCGTTGGAGTCGCCATTCTCGAAGGCGTGCTAAGACGATGGCGCAAAATCGTATGAAGACTTGCCCGGATTTTGCACAAATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACGGCCGCTGCATCTATGCGCCTCTTCTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAACTCAACCGCGATCTTCCTGGTGATGCCTTTGACGTCGTCACTCGAGCGAAAATTACCTTAGAGCTCTCCTGCCCTGGCATCGTCTCTTGCTCCGACGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCGCAGGCGGACCATCGTACAAAGTTGAGTTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCAGACGTGGAAGGCAACATTCCAAAACCGAATCAATCGATCGACGAGTTGATCAAGCTATACGCAGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATACGGCGGACGCACGATCGGATTCTCAAATTGCAGGGAATTCAGCGACCGGCTCTTCAACTTCGGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAGGCGTTGAAGAAGTCCTGTGCCGATTACGAGAAGAATCCAGCAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCGAGGACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTCGGAGAGGCGATGGAGAAGATGAGCGTTCGAGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGACAAGATGCGATGCGTTCAATTCAATCAACCATTAG 1200 52.17 MSLHDALDLGREEGVDGGLSFGNFKLSLAVGVGDDDGRRIGKVPVMAEAVNGASFGVLSDVVITEVTSCTEQRAKKRKGFGSRWSRHSRRRAKTMAQNRMKTCPDFAQIVHDTVARKHATSPVTAAASMRLFFSDCLVGGCDGSVLVSSNVFNHAERDAELNRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAAAGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYAAKGFTIQEMVALYGGRTIGFSNCREFSDRLFNFGKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVREVKTGGKGEVRTRCDAFNSINH 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 967469 969567 - CmaCh11G001890.1 Cma11g00189 302698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00189 399 PANTHER PEROXIDASE 41 96 398 - -
Cma11g00189 399 PRINTS Plant peroxidase signature 329 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 127 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 206 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 313 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 103 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 168 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 253 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 187 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Plant peroxidase signature 369 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Haem peroxidase superfamily signature 125 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Haem peroxidase superfamily signature 315 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 ProSiteProfiles Plant heme peroxidase family profile. 101 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 Gene3D - 101 395 - -
Cma11g00189 399 CDD secretory_peroxidase 101 394 IPR033905 GO:0004601|GO:0042744
Cma11g00189 399 PANTHER - 96 398 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 Pfam Peroxidase 117 358 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g00189 399 Gene3D Peroxidase, domain 2 232 374 - -
Cma11g00189 399 SUPERFAMILY Heme-dependent peroxidases 101 395 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00115 Cma-Chr11:619576 Cma11g00189 Cma-Chr11:967469 0 dispersed
Cma11g00189 Cma-Chr11:967469 Cma11g01116 Cma-Chr11:6277923 0 dispersed
Cma11g00186 Cma-Chr11:953744 Cma11g00189 Cma-Chr11:967469 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00189 K00430 - csv:101213178 494.197