Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00198 ATGGACGAAATTTCCCTCTTCTTCTCTGCCGCCATAACCTTGGCCACCGTCGTCCTCCTCTACCGCCTTTTATTCCACCAACGAAATTCCCGATCTCTCCCTCTCCCGCCGGGCCCGAAACCATGGCCGACAGTCGGAAACTTGCCGCAAATTGGCGGAGCGCCTCTCCACTCCCAACTCGCCGCCATGTCCGGAGAGTACGGACCTCTGATGTACCTCCGATTCGGCTCTATCGATGTCGTTGTCGCGGCATCGGCAGCAATAGCAGAGCAATTCTTGAAGATTCGAGACACTAATTTCCTCAGCCGGCCGCCGAACGCCGGCGCTAAATATATAGCATATAATTATCAGGACATGGTTTTTGCACCGTATGGTCCACGGTGGCGGTTACTCCGGAAGATCAGTGCCGTCCATCTGTTCTCCTCAAAAGCCCTAGAGGATAATCGGTGCGTACGCGAGGAGGAGGTGGGGGTGCTGGTACAGGCCCTTGCAAGGCCCGGAGAGGCACCGGCCACCTTGGGGAGTTTGCTCACTGTGTGCACAGCCAATGCCCTCGGGCGGACGATGATCGGCCGACGTGTTTTCGGCGATGGCAGTGGCGGTGGCGATCCAATGTCAGACCAGTTTAAGGCGATGGTAGAACAAGTTATGATTCTGTCCGGAAAGTTCAACCCCGGCAACTTTTTCCCGTCGCTTGAGTGGCTTGATTTGCTGGGCGTTGCTAGAGAGATGAAAAAGGTCCACAAATGGTTCGATGATTTATTGTCCAAGATCCTGGAAGAGCACCGAACTTTATTGGCCAGTGGCGGCGAACACCAAGACTTGCTGAGCACGCTTCTGTCCACAAGGGACCACGCTGAAGATGAAAATGAGAAGCTCAATGACACTGAGATCAAAGCTTTGCTATTGAATATGTTCACAGCTGGAACCGACACGTCAGCAAGCACAGTCGAATGGGCCTTGGCGGAGCTCATCAGACACCCAAAAATGATGTACCAGGCCCAACAAGAACTGGACTCTGTAGTGGGCCGTGATCGGGTAGTTTCTGATCTAGACCTGCCGAAGCTCGGCTATCTCCAAGCGGTGGTGAAGGAAACATTCCGTCTCCACCCACCAACGCCGCTCTCCCTCCCCCGCATGGCTGCCGAGAGCTGCGAGATCAACGGCTACCATATCCCTAAAGGCTCCACTCTGTTGGTGGACGTATGGGCCATAAGCCGTGACCCGAAAGAATGGACATGCCCACTCGAGTTTAGGCCCGATAGGTTCCTCCCCGGTGGCGAGAAGGCCCACGTCGATGTGAAGGGAAATGACTTTGGGGTGATTCCGTTTGGGGCTGGACGGAGGATCTGCGTGGGGATGAGTATGGGCCTGAGAATGGTCCAGATGTTAACTGCCTCGCTGGTCCATTCGTTTGATTGGGCCTTGCCTAGCGGGCTTTCGCCCGGTGAGTTGAACATGGACGAGGCCTTTGGACTGACTCTGCGTCGGGCCCAGCCCTTGGTTGCGCATCCTCGGCCCAGATTATCGCCTGGGGTTTATCAATGA 1548 55.36 MDEISLFFSAAITLATVVLLYRLLFHQRNSRSLPLPPGPKPWPTVGNLPQIGGAPLHSQLAAMSGEYGPLMYLRFGSIDVVVAASAAIAEQFLKIRDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISAVHLFSSKALEDNRCVREEEVGVLVQALARPGEAPATLGSLLTVCTANALGRTMIGRRVFGDGSGGGDPMSDQFKAMVEQVMILSGKFNPGNFFPSLEWLDLLGVAREMKKVHKWFDDLLSKILEEHRTLLASGGEHQDLLSTLLSTRDHAEDENEKLNDTEIKALLLNMFTAGTDTSASTVEWALAELIRHPKMMYQAQQELDSVVGRDRVVSDLDLPKLGYLQAVVKETFRLHPPTPLSLPRMAAESCEINGYHIPKGSTLLVDVWAISRDPKEWTCPLEFRPDRFLPGGEKAHVDVKGNDFGVIPFGAGRRICVGMSMGLRMVQMLTASLVHSFDWALPSGLSPGELNMDEAFGLTLRRAQPLVAHPRPRLSPGVYQ 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1007866 1010701 + CmaCh11G001980.1 Cma11g00198 302707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00198 515 Coils Coil 276 296 - -
Cma11g00198 515 SUPERFAMILY Cytochrome P450 36 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cma11g00198 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g00198 515 PANTHER CYTOCHROME P450 71B11-RELATED 10 507 - -
Cma11g00198 515 PANTHER FLAVONOID 3'-MONOOXYGENASE CYP75B4 10 507 - -
Cma11g00198 515 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00198 Cma-Chr11:1007866 Cma14g01195 Cma-Chr14:9549364 3.95E-135 dispersed
Cma11g00198 Cma-Chr11:1007866 Cma11g00199 Cma-Chr11:1011080 2.80E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00198 K05280 - csv:101207160 807.364