Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00198 | ATGGACGAAATTTCCCTCTTCTTCTCTGCCGCCATAACCTTGGCCACCGTCGTCCTCCTCTACCGCCTTTTATTCCACCAACGAAATTCCCGATCTCTCCCTCTCCCGCCGGGCCCGAAACCATGGCCGACAGTCGGAAACTTGCCGCAAATTGGCGGAGCGCCTCTCCACTCCCAACTCGCCGCCATGTCCGGAGAGTACGGACCTCTGATGTACCTCCGATTCGGCTCTATCGATGTCGTTGTCGCGGCATCGGCAGCAATAGCAGAGCAATTCTTGAAGATTCGAGACACTAATTTCCTCAGCCGGCCGCCGAACGCCGGCGCTAAATATATAGCATATAATTATCAGGACATGGTTTTTGCACCGTATGGTCCACGGTGGCGGTTACTCCGGAAGATCAGTGCCGTCCATCTGTTCTCCTCAAAAGCCCTAGAGGATAATCGGTGCGTACGCGAGGAGGAGGTGGGGGTGCTGGTACAGGCCCTTGCAAGGCCCGGAGAGGCACCGGCCACCTTGGGGAGTTTGCTCACTGTGTGCACAGCCAATGCCCTCGGGCGGACGATGATCGGCCGACGTGTTTTCGGCGATGGCAGTGGCGGTGGCGATCCAATGTCAGACCAGTTTAAGGCGATGGTAGAACAAGTTATGATTCTGTCCGGAAAGTTCAACCCCGGCAACTTTTTCCCGTCGCTTGAGTGGCTTGATTTGCTGGGCGTTGCTAGAGAGATGAAAAAGGTCCACAAATGGTTCGATGATTTATTGTCCAAGATCCTGGAAGAGCACCGAACTTTATTGGCCAGTGGCGGCGAACACCAAGACTTGCTGAGCACGCTTCTGTCCACAAGGGACCACGCTGAAGATGAAAATGAGAAGCTCAATGACACTGAGATCAAAGCTTTGCTATTGAATATGTTCACAGCTGGAACCGACACGTCAGCAAGCACAGTCGAATGGGCCTTGGCGGAGCTCATCAGACACCCAAAAATGATGTACCAGGCCCAACAAGAACTGGACTCTGTAGTGGGCCGTGATCGGGTAGTTTCTGATCTAGACCTGCCGAAGCTCGGCTATCTCCAAGCGGTGGTGAAGGAAACATTCCGTCTCCACCCACCAACGCCGCTCTCCCTCCCCCGCATGGCTGCCGAGAGCTGCGAGATCAACGGCTACCATATCCCTAAAGGCTCCACTCTGTTGGTGGACGTATGGGCCATAAGCCGTGACCCGAAAGAATGGACATGCCCACTCGAGTTTAGGCCCGATAGGTTCCTCCCCGGTGGCGAGAAGGCCCACGTCGATGTGAAGGGAAATGACTTTGGGGTGATTCCGTTTGGGGCTGGACGGAGGATCTGCGTGGGGATGAGTATGGGCCTGAGAATGGTCCAGATGTTAACTGCCTCGCTGGTCCATTCGTTTGATTGGGCCTTGCCTAGCGGGCTTTCGCCCGGTGAGTTGAACATGGACGAGGCCTTTGGACTGACTCTGCGTCGGGCCCAGCCCTTGGTTGCGCATCCTCGGCCCAGATTATCGCCTGGGGTTTATCAATGA | 1548 | 55.36 | MDEISLFFSAAITLATVVLLYRLLFHQRNSRSLPLPPGPKPWPTVGNLPQIGGAPLHSQLAAMSGEYGPLMYLRFGSIDVVVAASAAIAEQFLKIRDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISAVHLFSSKALEDNRCVREEEVGVLVQALARPGEAPATLGSLLTVCTANALGRTMIGRRVFGDGSGGGDPMSDQFKAMVEQVMILSGKFNPGNFFPSLEWLDLLGVAREMKKVHKWFDDLLSKILEEHRTLLASGGEHQDLLSTLLSTRDHAEDENEKLNDTEIKALLLNMFTAGTDTSASTVEWALAELIRHPKMMYQAQQELDSVVGRDRVVSDLDLPKLGYLQAVVKETFRLHPPTPLSLPRMAAESCEINGYHIPKGSTLLVDVWAISRDPKEWTCPLEFRPDRFLPGGEKAHVDVKGNDFGVIPFGAGRRICVGMSMGLRMVQMLTASLVHSFDWALPSGLSPGELNMDEAFGLTLRRAQPLVAHPRPRLSPGVYQ | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1007866 | 1010701 | + | CmaCh11G001980.1 | Cma11g00198 | 302707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00198 | 515 | Coils | Coil | 276 | 296 | - | - | |
Cma11g00198 | 515 | SUPERFAMILY | Cytochrome P450 | 36 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | Pfam | Cytochrome P450 | 36 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
Cma11g00198 | 515 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00198 | 515 | PANTHER | CYTOCHROME P450 71B11-RELATED | 10 | 507 | - | - | |
Cma11g00198 | 515 | PANTHER | FLAVONOID 3'-MONOOXYGENASE CYP75B4 | 10 | 507 | - | - | |
Cma11g00198 | 515 | Gene3D | Cytochrome P450 | 28 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00198 | Cma-Chr11:1007866 | Cma14g01195 | Cma-Chr14:9549364 | 3.95E-135 | dispersed | |
Cma11g00198 | Cma-Chr11:1007866 | Cma11g00199 | Cma-Chr11:1011080 | 2.80E-07 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00198 | K05280 | - | csv:101207160 | 807.364 |