Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00245 | ATGGATGCCCGCCGAGCCTCTCGCGTCGTCATCGACCCCAAAGTTCGGCAGGTCGGCTTCTTCACCCCCGACGCCCCGCATTCTCCGGGTGGGGCCCTTCCCACTCCGCCCGACTGCACTACTTCACTGCTCCCCGACTCTCCGACCAGTAATTCTCTGTCTCCTGTAATGATTCCGCCTCCACGTCACCCTTCCGACAACCTTTCCTCCCGGTCGGCTGGAAATTGGAGGCACCCTGAGGACCTGGTCCGTGTTGGGAGCCACAATCCCTCAGAAATGCTGCTCCGATCGTCGCCGATGGCGTCGCCCTCGACTCGAATTGCAGGTGAAGAATTGGAATCCTCGGAGGTTTCGTCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCCTCTAGCTGCCCTGGCGTTGGATTCTACATGGCGGCTAAGCGGGGGGATAATTTGGAGACAATGCCTGCCAATAGTGTGAGGACATTGGGAACTAACAAGCCTGCTGAAGCGACAGAAAAGATGGGAGGAGCATCCACAGAGGCCAAAGACCATCTTCCTTCAAGTTCGAAACCCTTGAAGGAAAAAACTACTAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAGCGAGCAGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTTCTGCCTCTGGGGCAACAGCCGGTAAAGTTGGGAAACAGCCTTCAACAGTTAAAGGTCCTGCTACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCCCCCCCTCCACGTATGCAATTTGATGATAAAAATCGGGTCGAAAGGGCTAAAAAGCGAGCTGTGTTTAATCAAACTGAAGCAAGAAATAGGGTTGCATTATTTCGCCATTTGCCACAATATGAGCAGGGGACTCAACTTCCTGATCTTGTGTCAAAATTTTTCCAACTCGATACCTTTCATCCTGCCATTTACAAGGTTGGTTTACAATACATGGCTGGAGATATATCTGGCGGTAATGCTCGTTGTATAGCAATGCTCCATGCATTTCAGGAGGCTATTAAAGACTACTCAACTCCGCCACAGAAATCTCTCGTTAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCATTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTGAAAAATCGCATTGCCAAATTACCACCAAGTCTTCTAGAATCTGAGGCGAAAGCTACACTTTCCCTAGATATCAGTCGTTTTATCAACGAGAAGATAATGCTTGCTGATGAGGTCATAGTTAGACACGCTGCTACGAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCACCCTGTGTTGTAGAGATGCTTCTATTGTATGCTCATGATCTTGGGAAACAATTTCGTGTTGTAGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTCAGTTGTACTTACACTCATATAAATGCTATTTCCTATGTGATGCGTGAAGTAAACCGTGTTTTTCTGGGTGCTGCTGCTGTATTAGCTAACGGAACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTTCATGTTCCAGTATTATTCTGCTGTGAAGCATATAAATTTCATGAAAGGGTACAACTTGATTCAATATGCTTTAATGAATTAGGCGACCCAGATGCTATATCCAAGATTTCAGGAAGGGCTGATATTAGTTATCTAGATAGTCTGACTTCTAAAGAACATTTTCAACTTCTGAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCAGCAACAAGCGTGCCTGTGATCGTACGCGAGTATCGCAGAGAGCACCTCCTATGGGTATGA | 1962 | 46.74 | MDARRASRVVIDPKVRQVGFFTPDAPHSPGGALPTPPDCTTSLLPDSPTSNSLSPVMIPPPRHPSDNLSSRSAGNWRHPEDLVRVGSHNPSEMLLRSSPMASPSTRIAGEELESSEVSSASVLLRRSGSGKLASSCPGVGFYMAAKRGDNLETMPANSVRTLGTNKPAEATEKMGGASTEAKDHLPSSSKPLKEKTTKAERRALQEAQRAAKVSAKGEANKSGSASGATAGKVGKQPSTVKGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKNRVERAKKRAVFNQTEARNRVALFRHLPQYEQGTQLPDLVSKFFQLDTFHPAIYKVGLQYMAGDISGGNARCIAMLHAFQEAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSLLESEAKATLSLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSPCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKISGRADISYLDSLTSKEHFQLLNLMYDATPSDYISMIVTDYGMIPATSVPVIVREYRREHLLWV | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1244761 | 1250245 | + | CmaCh11G002450.1 | Cma11g00245 | 302754 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00245 | 653 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 300 | 645 | IPR037171 | - | |
Cma11g00245 | 653 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 1 | 651 | - | - | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 148 | 275 | - | - | |
Cma11g00245 | 653 | Pfam | Initiation factor 2 subunit family | 343 | 634 | IPR000649 | GO:0044237 | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 186 | 207 | - | - | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 91 | 119 | - | - | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 219 | 233 | - | - | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 255 | 275 | - | - | |
Cma11g00245 | 653 | MobiDBLite | consensus disorder prediction | 1 | 119 | - | - | |
Cma11g00245 | 653 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 1 | 651 | - | - | |
Cma11g00245 | 653 | Gene3D | - | 439 | 645 | IPR042529 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00256 | Cma11g00245 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00245 | Cma-Chr11:1244761 | Cma15g00822 | Cma-Chr15:4132604 | 8.17E-09 | dispersed | |
Cma11g00245 | Cma-Chr11:1244761 | Cma11g00247 | Cma-Chr11:1252220 | 0 | proximal | |
Cma10g00256 | Cma-Chr10:1139004 | Cma11g00245 | Cma-Chr11:1244761 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00245 | K03680 | - | csv:101215104 | 926.391 |