Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00295 ATGGCAAAGGGAAAACTTGTGTCTGAGAAGATTAAGCTCATTCTTGCCTTGATTGCTCTGCAATTCTGCTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTGAACATTGGTGTTAGTAAAGTCGTGTATCCGGTGTATCGAAACGCGATCGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTCCTAGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTACTTGGAATCACTGCCAATCAAGGATTTTACCTCTTGGGGCTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCTATTACCTTTGTGATGGCTTCTGTTCTAAGGCTTGAGAAAATCAACTTCAGAAGGAGAGATGGGTTGGCAAAGCTTTTGGGAACTATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTTACTAACTCGAGGAAGTAGCATCTTGGGGATGGATGAACCTACACTTAAAGTGCAGAACTGGAGATGGGGCTGCATATACCTGCTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTCCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATTGCTGGCTTTGTGGAAACAGACTATCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACAATCTTATACGCTGGTGTTGTAGCCTCTGGCATTGTCATATCTCTCCAAACATGGTGCATTCAAAACAGTGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTTGTAGCCATCATGGCGTTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGCTATTGGAGCTGTTCTTATAACATTTGGACTCTACTTAGTTTTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGACAAGTGTTTGAAACAGCCACTTTTGGAAGACCAAAAAGGGGACAAAGAAGACAACGTTGTTTCAGACATACCATGA 1086 42.82 MAKGKLVSEKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMASVLRLEKINFRRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNLLTRGSSILGMDEPTLKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVISLQTWCIQNSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGAIGAVLITFGLYLVLWGKSKEKALEEDKCLKQPLLEDQKGDKEDNVVSDIP 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1465378 1468390 + CmaCh11G002950.1 Cma11g00295 302804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00295 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 151 - -
Cma11g00295 361 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Cma11g00295 361 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020|GO:0016021
Cma11g00295 361 PANTHER WAT1-RELATED PROTEIN 10 335 IPR030184 GO:0016021|GO:0022857
Cma11g00295 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 330 - -
Cma11g00295 361 PANTHER WAT1-RELATED PROTEIN 10 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00126 Cma-Chr9:547880 Cma11g00295 Cma-Chr11:1465378 2.91E-136 dispersed
Cma11g00295 Cma-Chr11:1465378 Cma12g00435 Cma-Chr12:2275723 3.70E-144 dispersed
Cma11g00295 Cma-Chr11:1465378 Cma05g00275 Cma-Chr5:1163426 5.91E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00295 - - cmos:111433746 683.715