Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00430 ATGGGGCGCTTTGAGGATTACAAGCCTGCATTGGCTATGCTGGGATTGCAGTGTATTTACTCTGCGCTTGCCATCTTCAGCAGAGCCGCTTTGGTCCATGGGATGAGCCCTAGAGTCTTTGTTGTTTATAGAAATGCCATTTCCACTATAGCCATGGCCCCTGCTGCTTTTATCTCTGCAAGGAAAAGTGGGCGCAGCCTTTCCATCGGATTCAGAGGCCTTTCTCTCATTTTTGTGACTTCTCTTATTGGAGTAACGGGCAACCAAAATGCCTATTTTGAAGGCCTTTACTTATCCTCGTCGTCGGCGGCGAGTGCCATCGTTAATTTGATACCTGCTATCACTTTCGTTATGGCTCTCACTGTAGGGTTGGAGAAACTTAAATCAAGAAGCTGGAGAAGTGTTGCAAAAGTACTAGGAACGGTGGTATGCGTCACTGGAGCAGCTGCAATGGCTTTGATAAAAGGCCCAAAATTATTAAACACAGACATGTTACCTAAAAGTCTTGGCGTTTTTGAAATGCTTGGTGTCGGAGTCGGAGTTGGAAACAGAGCCGAAGGGGACACGTGGCTTATCGGCTGCGTGCTTCTCTTCGTAGGCAGTTGCTTTTGGTCATTCTGGATCATCATGCTGGTCCCAATTTCAAGGCACTGTCCCGACCATATAATTTCTTCAACATGGATGTTGTTCCTCGCCATGTTCCAAGCAGCCATCTTTACACTACTGGTTGACGACAGCTCAAAAGTCTGGAACCTTCCTTCTCCATTGGAATTCGGCTCTTGTTTATACGCCGGAATATCCTCGGCATTGTCCTTTTTGGTTCAAGCATGGTGTGTGTCTCGAAGAGGCCCTCTTTTCACATCCCTATTCAACCCTCTGTGCACAGTCATTACGACCTTCATTTCCTCTCTGTTTCTGCACGAAGAGCTGTACAGTGGGAGCGTAATAGGTGCTATTGCTGTTATAATTGGATTATACATTGTATTATGGGGGAAGGCTAAAGACGTTGAAGGCATTGAAGGAGGAATAGATATAGAAGATGAGATTGAAAAGAATGAGTGCAAGAACGATCTAGAACAGCCCCTGCTGTTTGGTGAATCAGATGACACGATCAAATGTGATAAAGTTTGA 1131 45.53 MGRFEDYKPALAMLGLQCIYSALAIFSRAALVHGMSPRVFVVYRNAISTIAMAPAAFISARKSGRSLSIGFRGLSLIFVTSLIGVTGNQNAYFEGLYLSSSSAASAIVNLIPAITFVMALTVGLEKLKSRSWRSVAKVLGTVVCVTGAAAMALIKGPKLLNTDMLPKSLGVFEMLGVGVGVGNRAEGDTWLIGCVLLFVGSCFWSFWIIMLVPISRHCPDHIISSTWMLFLAMFQAAIFTLLVDDSSKVWNLPSPLEFGSCLYAGISSALSFLVQAWCVSRRGPLFTSLFNPLCTVITTFISSLFLHEELYSGSVIGAIAVIIGLYIVLWGKAKDVEGIEGGIDIEDEIEKNECKNDLEQPLLFGESDDTIKCDKV 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2109687 2112237 + CmaCh11G004300.1 Cma11g00430 302939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00430 376 PANTHER WAT1-RELATED PROTEIN 10 344 IPR030184 GO:0016021|GO:0022857
Cma11g00430 376 PANTHER WAT1-RELATED PROTEIN 10 344 - -
Cma11g00430 376 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
Cma11g00430 376 Pfam EamA-like transporter family 10 144 IPR000620 GO:0016020|GO:0016021
Cma11g00430 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g00430 Cma12g00827 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00430 Cma-Chr11:2109687 Cma02g00954 Cma-Chr2:5676174 1.92E-68 dispersed
Cma12g00828 Cma-Chr12:6131766 Cma11g00430 Cma-Chr11:2109687 2.93E-61 dispersed
Cma11g00430 Cma-Chr11:2109687 Cma12g00827 Cma-Chr12:6097076 1.64E-104 wgd
Cma11g00430 Cma-Chr11:2109687 Cma05g00661 Cma-Chr5:3380559 2.26E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00430 - - csv:101221252 509.99