Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00511 ATGGCTTCCATTTTAAGGAAAAAGGGAGGGGAAGAGGGTCAGCCTGAAATCGCTTCCTTCCATTCACTCACTCTGCCACCACCCCCCACCAAACCCTCGTTTTCTTCTTCCTTTTCTCCTTCCTTTTGTGGGGTTCGTTTCCCTGTGTGTGTTGGTAATTCTTTCGCCATGAGCGTTACCATTCTTCCAGATCTCGGGACTGAGATTTTCATTCCGGTATGTGCCGTTATCGGAATCATCTTCTCTTTGGTGCAGTGGTATTATGTTTCGCAGGTTAAACTCTCGCCTGGCCGAGATGCCGCTCACAACAACAGCGCCGGTTCTAAGAATGGTTACTCCGACTACCTCATCGAGGAGGAAGAGGGCGTCAACGACCATAACGTTGTGATTAAGTGTGCCGAAATTCAGAGTGCCATTTCTGAGGGAGCAACGTCCTTCCTTTTCACGGAGTACAAGTACGTTGGCATCTTTATGGTGCTGTTTGCAGTCTTGATCTTCGTATTCCTTGGCTCAGTTGAGAGTTTTAGTACCAAGCCTCAACCGTGCACATATGACAAAACAAGGACTTGTAAGCCAGCTTTGGCGACTGCTATATTCAGCACTGTATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATACGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTTCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGATGATTGGGGTGGTCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGTTCTTCCATGGCTCTCTTTGGAAGAGTTGGTGGTGGTATCTACACCAAAGCTGCCGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAACATTCCCGAGGATGATCCCAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTGTTTGGTTCGTATGCTGAATCTTCATGTGCTGCTCTCGTTGTTGCTTCTATCTCTTCTTTTGGCAACAACCATGAATTGACACCAATGCTCTACCCTCTCATCGTTAGTTCTATGGGTATTCTTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTTATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGTCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGTTGTTACGAACTGGAAACTGTTCTTGTGTGTTGCTGTGGGTCTCTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACGAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTCATTTTTGGGTTGGCGTTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGTCAGTATTTTTGTGAGTTTCACCTTTGCTGCCATGTACGGCATTGCTGTAGCTGCCCTTGGAATGCTGAGTACCATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACTGATGCCCTCGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCCCTTGTGTCCCTTGCTCTTTTCGGTGCCTTCGTCAGCCGTGCCGGTGTCACTGCTGTTGACGTCTTGACACCCAAAGTTTTTATTGGTTTGATTGTGGGTGCCATGCTCCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAGTTCAACACTATCCCAGGTCTCATGGAGGGTACTGCCAAGCCCGACTATGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCTCTTGTCATGTTGACACCACTAATTGTTGGTATCCTTTTTGGAGTTGAAACTCTTTCTGGTGTCCTTGCTGGGTCCCTTGTTTCTGGTGTGCAGATTGCCATTTCTGCATCTAACACCGGAGGAGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCACGCAAGAACCCTTGGCCCGAAAGGATCAGACCCACACAAAGCCGCTGTTATCGGTGACACGATCGGAGACCCGCTGAAAGATACATCCGGACCATCTTTGAACATTCTGATCAAGTTGATGGCTGTCGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCAGTCACGGTGGTCTTCTCTTCAAGATCTTCTGA 2475 46.75 MASILRKKGGEEGQPEIASFHSLTLPPPPTKPSFSSSFSPSFCGVRFPVCVGNSFAMSVTILPDLGTEIFIPVCAVIGIIFSLVQWYYVSQVKLSPGRDAAHNNSAGSKNGYSDYLIEEEEGVNDHNVVIKCAEIQSAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQPCTYDKTRTCKPALATAIFSTVSFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLSVPSSFTIFNFGTQKVVTNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTAVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGLLFKIF 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2413130 2418719 - CmaCh11G005110.1 Cma11g00511 303020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00511 824 Pfam Inorganic H+ pyrophosphatase 79 809 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma11g00511 824 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 57 823 - -
Cma11g00511 824 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 65 814 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma11g00511 824 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 57 823 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma11g00511 824 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 67 819 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma11g00511 824 PIRSF H+-PPtase 65 822 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00511 Cma11g00511 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g01035 Cma-Chr12:8211478 Cma11g00511 Cma-Chr11:2413130 0 transposed
Cma17g00620 Cma-Chr17:5283051 Cma11g00511 Cma-Chr11:2413130 4.04E-152 transposed
Cma10g00511 Cma-Chr10:2323176 Cma11g00511 Cma-Chr11:2413130 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00511 K23025 - csv:101222673 1430.23