Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00556 | ATGAGCCACACTCCACCGCCGCCGTTCGACTCGATCAAGATCCCTTTCCTATGCGCCCTCCTCTTCATACTAGCTGTCAAGATGGCCGTGGCCTTGTGGTGGAAGCCCAGAAGGATAGAAGCACACTTTCTCCGCCAAGGAATTCGCGGCCCTCCTTATCGTTTCTTCATCGGTAACTTCAAAGAACTCGACTCTATGATGCTCGCCGCTACCTCCCGTCCGATGCCCAATTTCTCCCACAATATTCTCCCCCGCGTCCTCTCTTTTTACCATCATTGGAAGAAAATTTACGGCTCCACATTTCTGATCTGGTTCGGACCCATTGTTCGAGTGGCCGTGTCCGACCCGGACATGATCCGAGACATCTTGACTACCAACTCAGAATTCTACGAGAAAAACGAAGCTCACCCTCTCATCAAAAAGCTCGAGGGCGACGGCCTCCTTACTCTCAAGGATCAGAAATGGGCTCTCCATCGCAAGATCATCTCCCCCGTATTCAACATGGAGAATCTCAAGTTGTTGATTCCGGTGGTGGAGGAAAGTGTGGTGGATATGGTGGAGAAATGGTCGGCCATGGCAGGCGGCGCCGCCTCGGACGAGGTGGAGATTGATGTTTTTGATTGGTTCCAAACGCTAGCTGAAGATGTGGTGACCAAGACAGTGTTCGGAAGTAGCTATGAAGATGGTAAAGCCATTTTCAAGCTTCAAACTCAACAAATGATATTAGCTTCCGAAGCTTTCCAAAAGGTCTTCATTCCTGGCTACAGATTTTTGCCGACAAGAACCAATATTAATTCGTGGAAATTAGACAAGGAAATAAGAAAATCATTGATGAAATTGATCGAGAGTCGAAAAGGGAATTCAGAGAAAATTTGGGCAATGGATGAAAAAGCGCCAAAAGATTTATTAGGGCTCATGATTCAAGCTTCCAACTCATCATCTTCTTCTTCTTCATTACACACTAATATTTCCGTCCACGACATCGTTGAAGAGTGCAAAACCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTCGCAATGCATCCACAGTGGCAAATTCAGGCACGTGACGAGGTTCTTAGCGTGTGCGGTCCACGTGCTCTCCCCTCCAGAGATGACCTTTCTAAGTTCAAGATCCTGAGCATGATACTGAACGAGTCCTTACGATTGTACCCTCCGACGGTGGCTACGATTCGACGTGCAAAGACAGTCGTCGAGCTAAGAGGGCGGATGATCCCACGGGGGACAGAGTTCTTAATCCCAATTCTAGCGGTTCATCATGATCAAAATATTTGGGGGAATGATGCGAGCGAGTTCAATCCAGGGCGATTCTCAGAAGGCGTGGGCCACGCTGGAAACCATCCAGCCGGGTTCATTCCATTTGGACATGGTCTTCGTGCTTGCATTGGCAAGAACTTGGCTCTTCTGCAAGCAAAGTTGGCAATAGCAATCATAGTTCAACGATTCTCATTTCGATTGGCTCCTTCTTACCAGCATGCACCAGCAGTGTTGATGCTTTTGTATCCGCAATACGGAGCTCCGGTTGTTTTTCAAAAGATAGTAGAGACCCGAAGGGATTAA | 1608 | 47.95 | MSHTPPPPFDSIKIPFLCALLFILAVKMAVALWWKPRRIEAHFLRQGIRGPPYRFFIGNFKELDSMMLAATSRPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIRDILTTNSEFYEKNEAHPLIKKLEGDGLLTLKDQKWALHRKIISPVFNMENLKLLIPVVEESVVDMVEKWSAMAGGAASDEVEIDVFDWFQTLAEDVVTKTVFGSSYEDGKAIFKLQTQQMILASEAFQKVFIPGYRFLPTRTNINSWKLDKEIRKSLMKLIESRKGNSEKIWAMDEKAPKDLLGLMIQASNSSSSSSSLHTNISVHDIVEECKTFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVLSVCGPRALPSRDDLSKFKILSMILNESLRLYPPTVATIRRAKTVVELRGRMIPRGTEFLIPILAVHHDQNIWGNDASEFNPGRFSEGVGHAGNHPAGFIPFGHGLRACIGKNLALLQAKLAIAIIVQRFSFRLAPSYQHAPAVLMLLYPQYGAPVVFQKIVETRRD | 535 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2693602 | 2695969 | + | CmaCh11G005560.1 | Cma11g00556 | 303065 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00556 | 535 | Pfam | Cytochrome P450 | 87 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | Gene3D | Cytochrome P450 | 33 | 530 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | SUPERFAMILY | Cytochrome P450 | 80 | 527 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | P450 superfamily signature | 338 | 355 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | P450 superfamily signature | 477 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 94 | 113 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 212 | 230 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 327 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 347 | 373 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma11g00556 | 535 | PANTHER | CYTOCHROMEA2 | 16 | 524 | - | - | |
Cma11g00556 | 535 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506|GO:0016705 | |
Cma11g00556 | 535 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 524 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00556 | Cma-Chr11:2693602 | Cma12g01226 | Cma-Chr12:9549605 | 0 | dispersed | |
Cma09g00170 | Cma-Chr9:722558 | Cma11g00556 | Cma-Chr11:2693602 | 1.33E-155 | transposed | |
Cma10g00573 | Cma-Chr10:2620518 | Cma11g00556 | Cma-Chr11:2693602 | 0 | wgd | |
Cma11g00556 | Cma-Chr11:2693602 | Cma05g01311 | Cma-Chr5:9941119 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00556 | K15639 | - | csv:101213466 | 853.588 |