Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00630 ATGGGTTGCGTTCATTCGAGGGTTTGTTTTGGCGAGGCTACAACTCCAAGATCTTCAAGAATTGCCGACACCCAAAATGCCGCCAATACCGCCGTTGAAATCGACGCGATCTCTACTTCGTCTTCTGATAGCCAAGAAGATGAAATCGGCAACCAACTGAATTCAAACAACAGAGATTCAGAAGTTGGAATAACGAGGCTGTCGAGAATTTCAGCGCAGTTCTTGCCTGCTGATGGGTCTCGAACCGTCAAAGTCCCTTCTGGAAACTTCGAATTGCGATATTCGTTTCTTTCGCAAAGAGGGTACTATCCCGATGCTCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAACCCAGATGACCATTTCTTTGGAGTTTTCGACGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTAAAACGAAAGCTCTGTGAAAATTTACTTAGAAATAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCACAATTACACGCAGATATGTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTACGACTATATATGTTTCTAATTCAGGTGATTCGAGAGCGGTTTTAGCCGAGCGGAGAGGAAAGGAAATCGTGGCTGTTGACCTCTCGATCGATCAAACCCCGTTCCGAACCGATGAACTCGAACGTGTTAAACTTTATGGTGCCAGAGTTCTAACACTTGATCAGATTGAGGGGCTGAAGAACCCTGATGTTCGGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTATGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTAGTTGCTACACCGGAAATTGTTGTTCTAGAGCTGACGCCAGATAATCCTTTCTTTGTCGTTGCTAGTGATGGGGTTTTCGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGGTTGCTAAACATAAAGATCCCCGTGATGCTTGTGCTGTGATTGTGGCCGAGTCTTACAGACTTTGGCTTCAATATGAGACTCGGACTGATGATATCACTGTTATCGTGGTGCACGTTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCGGTGGAGGTGGTTTTGTTCGATCCACTGTTCCTCAAGTTTTGGAGGTGACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAATCGAAACAACCGTGCAAGGCAAGATTTGTCACGGTCGCGTCTCAGGGCTATCGAAAGTTCCCTAGAGAATGGGCAGGTCTGGGCGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTACACGATCATTTCCTCTTCAGAAAATTAACCGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTCGAGGTCATACCGGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTATGTAGTTGGAAGTGGAGAGTTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTATACAGCTGAGAAGCTATCTTCCTTTGGCGAACTGGCTTTGATGTATAACAAACCACTTCAAGCCTCCGTACGTGCTGTGACTAGTGGCACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCGGAATTTTCTAACTTGTCGTCTCTGAAATTGCTTCGATCTGTGGACCTTCTGTCGAGGTTAACAATCTTGCAATTGAGTCACATTGCAGATTGCCTTTCTGAAGTTACCTTCTCAGATGGGCAGTTGATAGTTGATGGGAACGAAGGTTCACGTGCACTTCACATTATTCATAAGGGCCAAGTGAGGATTACTTTTGATGTAGAGTTAATGAGCAATTCAAATATTTACGACGACGATGTTGCACAGAATGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGCAGTTATTTTGGCGAATGGGCACTTCTTGGTGAGCATATTGGCTTCTTACGCGCAGTTGCTGTGGGAGATGTCGTATGCGCTATTTTAACGAAGGAAAAGTTTGAATCAGTTGTTGGTCCTTTACCAAAGCTCTCTCAAGATGACCAAAAGGAACATTCTTCAGACTCCCTCCATCACTCTGCTAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTTGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACAGAATACAGTGAGATCGGGCTAGTTCGGTTAAGGAACACAGAAAGTATGCTTAGTTTAGAAAGGTTTACAAGACAAAAGGTCAAGAGGCTGGGACTTGAAGAACAAATGTTGAAGGAGAAAAATCTTATGAAAACCGTCAGTTCTTCAGCTTGTGTGCCGCAACTCCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAAAACATGCCTTGCTTGTCCTTTCGCTTCGATACTCCACGTTCCACTCGACGAGTCTTCTGCTCGTTTCTATGTAGCCTCTCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCCGATGTTCTAATGCTGGATCAAACTGGACGGATACAGTTAGTCGACTTCCGATTCGGGAAAAGAACATTGGGTGAGAGAACGTATACTATGTCGGGGAGGGAAGAGTTTTTAGCACCTGAGATAGTTCAGGGCAATGGCCATGGTTTTGCTGCAGACTGGTGGGCGCTGGGAGTCTTAACCTATTTCATGCTGAAAGGTGAAATGCCATTTGGATCGTGTCGACAAAGCGAGCTCGATATTTCTTGTCTTCTCGAGATTATCAGTCCTGAAGCCACTGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAACGACTTGGCAACGAGAACGAAAACTCGGTTAGAAGTCATCCCTGGTTTGTTGGTGTCGATTGGAAGGGGATCCGTGACAGTACCTTTCCCGTTCCCGACTCGATCACTTCTCGTGTGGCTCAATATTTGGCAAGCTACCCTGAAGATTCCTGTGGTTCTTTAGTCGAACCACCTCAAGATCCCGACGAGTCGGATGGCCCCAAGTGGATCAGCGAGTGGTAG 3189 45.37 MGCVHSRVCFGEATTPRSSRIADTQNAANTAVEIDAISTSSSDSQEDEIGNQLNSNNRDSEVGITRLSRISAQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNNPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADMLDDSMSGTTAITVLVRGTTIYVSNSGDSRAVLAERRGKEIVAVDLSIDQTPFRTDELERVKLYGARVLTLDQIEGLKNPDVRCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDNPFFVVASDGVFEFLSSQTVVDMVAKHKDPRDACAVIVAESYRLWLQYETRTDDITVIVVHVNGLTNTVTSESTRSGGGGFVRSTVPQVLEVTGSESPSTFGWNRNNRARQDLSRSRLRAIESSLENGQVWAPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSRLTILQLSHIADCLSEVTFSDGQLIVDGNEGSRALHIIHKGQVRITFDVELMSNSNIYDDDVAQNGKEISVIKKEGSYFGEWALLGEHIGFLRAVAVGDVVCAILTKEKFESVVGPLPKLSQDDQKEHSSDSLHHSAKIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLRNTESMLSLERFTRQKVKRLGLEEQMLKEKNLMKTVSSSACVPQLLCTCLDQSHAGILLKTCLACPFASILHVPLDESSARFYVASLVIALEDLHKLGVLYRGISPDVLMLDQTGRIQLVDFRFGKRTLGERTYTMSGREEFLAPEIVQGNGHGFAADWWALGVLTYFMLKGEMPFGSCRQSELDISCLLEIISPEATDLIVKLLEVDEKKRLGNENENSVRSHPWFVGVDWKGIRDSTFPVPDSITSRVAQYLASYPEDSCGSLVEPPQDPDESDGPKWISEW 1062
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3041094 3046788 + CmaCh11G006300.1 Cma11g00630 303139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00630 1062 ProSiteProfiles cAMP/cGMP binding motif profile. 478 586 IPR000595 -
Cma11g00630 1062 SMART serkin_6 766 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00630 1062 MobiDBLite consensus disorder prediction 1038 1062 - -
Cma11g00630 1062 Pfam Protein phosphatase 2C 116 362 IPR001932 -
Cma11g00630 1062 Gene3D - 87 384 IPR036457 -
Cma11g00630 1062 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Cma11g00630 1062 Gene3D Phosphorylase Kinase; domain 1 758 843 - -
Cma11g00630 1062 ProSiteProfiles Protein kinase domain profile. 759 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00630 1062 SUPERFAMILY cAMP-binding domain-like 597 727 IPR018490 -
Cma11g00630 1062 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 28 1038 - -
Cma11g00630 1062 SMART cnmp_10 478 601 IPR000595 -
Cma11g00630 1062 SMART cnmp_10 604 738 IPR000595 -
Cma11g00630 1062 Pfam Protein kinase domain 782 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00630 1062 SUPERFAMILY PP2C-like 82 385 IPR036457 -
Cma11g00630 1062 SMART PP2C_4 89 381 IPR001932 -
Cma11g00630 1062 PRINTS cAMP-dependent protein kinase signature 499 513 - -
Cma11g00630 1062 PRINTS cAMP-dependent protein kinase signature 514 528 - -
Cma11g00630 1062 PRINTS cAMP-dependent protein kinase signature 549 558 - -
Cma11g00630 1062 PRINTS cAMP-dependent protein kinase signature 716 728 - -
Cma11g00630 1062 CDD CAP_ED 478 586 IPR000595 -
Cma11g00630 1062 SUPERFAMILY Protein kinase-like (PK-like) 764 1019 IPR011009 -
Cma11g00630 1062 CDD PP2Cc 109 383 IPR001932 -
Cma11g00630 1062 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 28 1038 - -
Cma11g00630 1062 Gene3D Jelly Rolls 445 586 IPR014710 -
Cma11g00630 1062 SUPERFAMILY cAMP-binding domain-like 458 587 IPR018490 -
Cma11g00630 1062 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Cma11g00630 1062 Pfam Cyclic nucleotide-binding domain 498 586 IPR000595 -
Cma11g00630 1062 Pfam Cyclic nucleotide-binding domain 623 720 IPR000595 -
Cma11g00630 1062 Gene3D Jelly Rolls 591 738 IPR014710 -
Cma11g00630 1062 CDD CAP_ED 604 728 IPR000595 -
Cma11g00630 1062 Gene3D Transferase(Phosphotransferase) domain 1 844 1019 - -
Cma11g00630 1062 MobiDBLite consensus disorder prediction 38 57 - -
Cma11g00630 1062 ProSiteProfiles cAMP/cGMP binding motif profile. 604 737 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00654 Cma11g00630 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00630 Cma-Chr11:3041094 Cma14g01665 Cma-Chr14:12453529 1.51E-136 dispersed
Cma10g00654 Cma-Chr10:2961143 Cma11g00630 Cma-Chr11:3041094 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68889 PF00481 PP2C 4.10E-35 CL0238 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00630 - - csv:101217861 1856.65