Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00684 ATGAGGTTACCGTCCTCTGCAATTCTTGTCCTCTTGCTATACTTTCACCTTCTTCTTTGCTTCGCTACTTTCCCTTCCCTTTCCATCTCCATCTTAACCGTCACTAAATCCGACTTGGTGTTCGGCGAGATCAATGCTACTTCCCATTCTAACTCCTTGAGATCCGCCAATGACGACCATAGTTTTGCTGATATAATCGATCAGGCTCTCGAGAGGGAATTCACTGAGAATGGGCAGAGTGATCAAGTCGCGGATGCTGGCAGCTTCAACAACAGCGTAACTGATAAGCAGGCAGTTTTGGAGACTGTTGCCAGAGTTAAGTCAAAGAAGAACGAATCGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCAATTTAGATAATGAGAATCGAGCAGAAGACATGCCCACCTTAATTGATCGGAAGGACAATGTCTTTATTATATCCAATCCCAAGTCGAAGTATCCAGTGCTCCAATTGGATTTAAGATTGATTTCGGATCTAGTCGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTTGCTTGTGCAGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGAGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCATTGGGCTTGGAGTTCTCCACTACAAAACTTCGTGTTGTTCGAGCAGTGGCTGTTCTAGGAGGATTGCTCCAAATTTTCCTTTTTATGTGCTTGTCTGGAATTACAGCTTCACTGTGTGGTGGTAAATCATCAGAGGGGGTCTTTGTTGGGGCATTCTTGTCTATGTCTTCGACTGCAGTGGTCTTGAAGTTTTTAATGGAACGAAATAGCATCAATGCCCTTCATGGTCAGGTGACCATTGGTACTCTTATTCTTCAGGATTCAACGGTAGGATTGCTGTTTGCCCTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAATTCTGTCCATGACTAAGTCGTTGGTGGTCTTGATTACGTTTTTTATTTTTTTGTCAATATTATCTCGCACATGTGTGCCGTGGTTCCTTAAGCTTATGATTAGCCTGTCATCTCAGACTAATGAGCTCTATCAATTGGCAGCTGTTGCATTCTGCTTGCTTGTAGCTTGGTGCAGTGATAAACTTGGTTTAAGCCTTGAATTGGGTTCCTTTGCTGCGGGTGTGATGATATCAACTACTGATCTTGCTCAGCACACACTCGAACAGGTTGAGCCCATCCGCAACTTTTTTGCTGCACTTTTTCTTGCTAGCATTGGGATGCTTATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCAGCTGTGATATTGGTCATCGTTATAAAAACTTTAGTGGTTGCTGCTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTTGCACAAATTGGGGAATTTTCTTTTGTCCTTCTAAGTCGTGCATCTAATCTTCATCTTGTTGAGGGAAAATTGTATGTACTGCTGCTGGGGACAACTGCACTTAGTCTGGTGACTACCCCATTGCTTTTCAAGCTTATTCCTGCTGTGGTACGTATTGGAGTGTTGTTCCGGTGGTTTTCACCTGATGGTTTGAGTGAGACGGGATTTAAAGGAGATGGCTTTCGAACAGATGGTATCAAGCGCATCACTTTGGTGGTTCAAGACTCTCACGTTTCATGA 1764 43.25 MRLPSSAILVLLLYFHLLLCFATFPSLSISILTVTKSDLVFGEINATSHSNSLRSANDDHSFADIIDQALEREFTENGQSDQVADAGSFNNSVTDKQAVLETVARVKSKKNESKEEKSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSINALHGQVTIGTLILQDSTVGLLFALLPILGGTSGVLQGILSMTKSLVVLITFFIFLSILSRTCVPWFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIVIKTLVVAAVVKGFGYNNKTSLLVGMSLAQIGEFSFVLLSRASNLHLVEGKLYVLLLGTTALSLVTTPLLFKLIPAVVRIGVLFRWFSPDGLSETGFKGDGFRTDGIKRITLVVQDSHVS 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3318342 3328599 - CmaCh11G006840.1 Cma11g00684 303193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00684 587 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma11g00684 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 11 586 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cma11g00684 587 Gene3D - 163 546 IPR038770 -
Cma11g00684 587 PANTHER K(+) EFFLUX ANTIPORTER 6 11 586 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g00684 Cma12g00636 CCT
Cma10g00712 Cma11g00684 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00096 Cma-Chr5:411737 Cma11g00684 Cma-Chr11:3318342 0 dispersed
Cma11g00684 Cma-Chr11:3318342 Cma12g00636 Cma-Chr12:3375519 0 dispersed
Cma10g00712 Cma-Chr10:3201645 Cma11g00684 Cma-Chr11:3318342 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00684 - - cmos:111441171 1058.9