Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00695 ATGGAGGTTCTGGTTCCAACGATGCTTCACCTACTGATTCTTTTGGTCACTGTTCATGCTTCCGAGCTTCGGGAAATTGCAGAGCCTTATATCTCTCCAGCAGTAGCTCTTTCCCCTAATAATGCATTACCACCTCTGAATCATTCCCCGGAAGAAGCTCCTTCCACTCACAATGACATGGGACACTCTCATGATGCTGAACAGCCAATTCTTCCACCACAAGAAGCTCATGATGTTGAACAGCCAAATGAAGATTGTTCGGCTACCCTATGCACCGACCCGTATACAAATACTCCCCCGGGATCCCCCTGTGGTTGTGTTTGGCCCATACAAGTTCGACTTCGTTTCAGTGTTCCCCTCTATACCTTCTTCCCTCTAGTTTCAGAGCTGGCTGCTGAAATTGCTTCCGGAGTATATGTAAAGCGAAGTCAAGTTCGTGTTATTGAGGCCAATGCAGCTTATCAGCAACCAGATAAGACTGTTGCCCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAAAAAGTTTCTATCAAAGCTTACTATTTCGGGAACTATGAAGTGTTATACGTTCGATATCCAGGTTTGCCTCGATCGCCCCCTCCTGGAGTTTCAGGGCTAGATAATGAGCCTCATTTGACTAATACTAACAATGTGAGGACAGTAAAACCCGTCGGTGTCGATGTGCACAACAGACAGCCAAAGGATAGAATTAGTGATGGTATGATTGCTATCATCACCCTATCAACTACTGTTGCAGTGGGCTTATGTCTTGTTACTGCTTGGATTTTGCTCTTTACACATAATGATGCAAAACCAAATCCACATGTTTCGTTATCCGCCCTCAATAAGCCATCAGGTGCTGGTGGATCAGTTATGGCAACCATACCTAGTTCTGCCTCTTTATTCTTTGGATATAGCATTGCTTCATATTCAGGATCAGCCAAGATCTTCAGTGCATCTGACATAGAGAGAACCACAAATAATTTTGATCCTTCAAGAATACTGGGGGAGGGTGGGTTTGGACGTGTTTACAGTGGCACGCTCGAAGATGGTACCGAAGTAGCAATCAAAGTTCTCAAGAGAGATGATCATCAGGGCAGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGCCGCCTCCACCACAGAAATTTGGTCAAGTTGATTGGAATATGTACTGAGGAGCATAACTGTTCCCTGGTGTATGAACTTGTTCCAAATGGCAGTGTTGAATCTCATTTACATGGTATGGATAAGGAAACTGGCCTACTTGATTGGGGTGCCAGGATGAAGATAGCGCTGGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCGATTCCTAGAGTCATACATCGAGATTTCAAATCAAGTAATATCTTACTAGAACATAATTTTACACCAAAAGTTTCCGACTTCGGGTTGGCTCGAACTGCAACAGATGAGGAAAGCAGACACATAACTACACATGTCATGGGAACTTTCGGGTATGTGGCTCCAGAGTATGCAATGACTGGCCATCTACTTGTAAAGAGTGATGTTTATAGTTACGGAGTTGTTTTACTTGAACTATTAACTGGTAGAAAACCAATTGATATGTCTCAACCACCCGGTGAAGAAAGTCTCGTTGCTTGGGCTCGTCCACTCCTCACCAGCAAAGAAGGTCTAGATGTTATAATTGATAAATCACTAGATTCCAATGTTCCTTTTGAAAACATTGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACACCGACCTTTCATGGGTGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGTGATGGGGTTCAAGAAACAAGCTCGCAAACTAATTCGAGCTCAAAGAACTCATCTGTGGATATGAATGATGAAGCTTCGAGTTCAAAACTCGTGCTAGACTCTTTTCATAGCAAATATTTAGTACCTAACTCAATTTCAGGTCTTGATGGAATCGACACACGTCTCTCGATTTCAGACTTATTAAATACTTCCATCGATATGGGAATGCAAGAATCAAGATCACTCAAAAGATGCTTCAGTTCCGCTACTCTTAGAATCGAGAAAAGCAAAAGAAACTATTGGCAAAGAATGATAAGTAGCATGAGTGAACATGGAATGCCTAGATTATCCCATACTCCCTAA 2214 42.77 MEVLVPTMLHLLILLVTVHASELREIAEPYISPAVALSPNNALPPLNHSPEEAPSTHNDMGHSHDAEQPILPPQEAHDVEQPNEDCSATLCTDPYTNTPPGSPCGCVWPIQVRLRFSVPLYTFFPLVSELAAEIASGVYVKRSQVRVIEANAAYQQPDKTVALIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKAYYFGNYEVLYVRYPGLPRSPPPGVSGLDNEPHLTNTNNVRTVKPVGVDVHNRQPKDRISDGMIAIITLSTTVAVGLCLVTAWILLFTHNDAKPNPHVSLSALNKPSGAGGSVMATIPSSASLFFGYSIASYSGSAKIFSASDIERTTNNFDPSRILGEGGFGRVYSGTLEDGTEVAIKVLKRDDHQGSREFLAEVEMLSRLHHRNLVKLIGICTEEHNCSLVYELVPNGSVESHLHGMDKETGLLDWGARMKIALGAARGLSYLHEDSIPRVIHRDFKSSNILLEHNFTPKVSDFGLARTATDEESRHITTHVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGEESLVAWARPLLTSKEGLDVIIDKSLDSNVPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCDGVQETSSQTNSSSKNSSVDMNDEASSSKLVLDSFHSKYLVPNSISGLDGIDTRLSISDLLNTSIDMGMQESRSLKRCFSSATLRIEKSKRNYWQRMISSMSEHGMPRLSHTP 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3381612 3385760 - CmaCh11G006950.1 Cma11g00695 303204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00695 737 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Cma11g00695 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Cma11g00695 737 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 42 729 - -
Cma11g00695 737 CDD STKc_IRAK 350 618 - -
Cma11g00695 737 Gene3D Phosphorylase Kinase; domain 1 321 419 - -
Cma11g00695 737 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00695 737 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Cma11g00695 737 Pfam Protein tyrosine and serine/threonine kinase 348 617 IPR001245 GO:0004672|GO:0006468
Cma11g00695 737 PANTHER OS01G0750732 PROTEIN 42 729 - -
Cma11g00695 737 MobiDBLite consensus disorder prediction 42 70 - -
Cma11g00695 737 Gene3D Transferase(Phosphotransferase) domain 1 420 646 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00720 Cma11g00695 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00695 Cma-Chr11:3381612 Cma19g00126 Cma-Chr19:744556 0 dispersed
Cma10g00720 Cma-Chr10:3251540 Cma11g00695 Cma-Chr11:3381612 5.56E-10 wgd
Cma11g00695 Cma-Chr11:3381612 Cma17g00725 Cma-Chr17:5938256 0 wgd
Cma11g00695 Cma-Chr11:3381612 Cma08g00773 Cma-Chr8:4659704 2.22E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68893 PF07714 PK_Tyr_Ser-Thr 7.50E-50 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00695 - - cmax:111466443 1465.67