Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00709 | ATGGAGAATCATCAGGAGGTTGAAAGCGAGGAAGAAGATGGAGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAATTGGAGTCGTGGGTTCGAGCTTGACTTTGGAGAAGGTCGCTGCGGCTAAACAGTACATTGAAAATCATTACAAGGCTCAAAAAAAACATATTCAAGAACGCAAAGAGAGGCGTTCCTTGCTAGAAAGGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCACAAGGAGACTCAATACATTCGGCTCAAAAGGCATAAGATTTGTGTTGAGGATTTTGACCTTTTGACAATTATTGGGCGAGGTGCATTTGGGGAGGTTAGACTTTGTCGGGAGAAGAAAACAGGTAACATATATGCTATGAAGAAGCTGAAGAAATTAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTGCTTGCAGAAGTTGCAAGTCACTACATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTAATCATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTAATTAGGGAAGAAACTTTGACAGAAACCGTAGCCAGATTTTACATCGCTCAAAGCGTTCTAGCTATCGAGTCGATTCATACACATAACTACATTCACAGAGACATAAAACCGGACAACCTTCTTTTGGACCAAAGGGGTCATATGAAACTGTCTGATTTTGGTCTTTGCAAACCTCTTGACTGTTCAAATCTGTCTTCTATAAATGAGAATGAAGTCCTTGACGACGATAACTTGCACGACACGGTGGATGTTGATGCAAGTGTTCCGGGGAAGAAAAGTGGGAGGCGTTGGAAGAGCCCCCTTGAACAACTTCAACATTGGCAGATTAACAGAAGGAAACTGGCATTCTCCACGGTTGGCACTCCAGACTACATAGCTCCAGAAGTGTTGCTTAAAAAAGGATACGGCGTTGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGGTTATCACCTGAAGCAAAGGACCTGATTAGTAGGCTGCTTTGTGATGCAGACCATAGGCTTGGGACAGGAGACGCCGACCAAATAAAGACTCATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTATGATATAGATGCAGCATTTAAGCCTGAGGTCAATGGGGAACTTGATACGCAGAACTTTATGCAATTTGATGAGGTCGATCCACCGCCAACGAGAACGGGATCCGGACCAATAAGGAAGATGTTATTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGATGCTGTCAAAGGGCTACGCCATTCATTTGATTTGAACTCAAGCACCAGCCCAATTCGGACTTCGTCAGTTGACTCAACACAAAGTGACTCGGCATTGAACTACTCAACGATGTACTCAGGCGGTGATAGGGAAGCCATATTGGGATCATCTGGGGATGCATTGTCACAAGGCCTTGTGAGTGCCCAGGAATTTTCCAAACCCTTGAATGCCCCGGATCGTTGTAGCTTCAATCGAGCGCGAATATCAACGATTTGTTTCGGATTGGAAGTTGAGGTAAACCATCTTTCTGTTTCGAAGCATGGGTTAAAAGATCCTTGCTGTATGTTACTTTGCTTTCTTGGGCTATGGTATGGATGA | 1806 | 42.97 | MENHQEVESEEEDGVVEEEEEEEEEEEIGVVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSLLERKLASSDVSEEEQINLLKDLEHKETQYIRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKLEMLSRGQVEHVRAERNLLAEVASHYIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYIAQSVLAIESIHTHNYIHRDIKPDNLLLDQRGHMKLSDFGLCKPLDCSNLSSINENEVLDDDNLHDTVDVDASVPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDLISRLLCDADHRLGTGDADQIKTHPWFKDTEWDKLYDIDAAFKPEVNGELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFDAVKGLRHSFDLNSSTSPIRTSSVDSTQSDSALNYSTMYSGGDREAILGSSGDALSQGLVSAQEFSKPLNAPDRCSFNRARISTICFGLEVEVNHLSVSKHGLKDPCCMLLCFLGLWYG | 601 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3453691 | 3462993 | + | CmaCh11G007090.1 | Cma11g00709 | 303218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00709 | 601 | SUPERFAMILY | Protein kinase-like (PK-like) | 91 | 465 | IPR011009 | - | |
Cma11g00709 | 601 | Gene3D | Phosphorylase Kinase; domain 1 | 107 | 192 | - | - | |
Cma11g00709 | 601 | Gene3D | Phosphorylase Kinase; domain 1 | 435 | 445 | - | - | |
Cma11g00709 | 601 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 258 | - | - | |
Cma11g00709 | 601 | Gene3D | Transferase(Phosphotransferase) domain 1 | 315 | 434 | - | - | |
Cma11g00709 | 601 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 22 | 520 | - | - | |
Cma11g00709 | 601 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cma11g00709 | 601 | Coils | Coil | 7 | 27 | - | - | |
Cma11g00709 | 601 | ProSiteProfiles | Protein kinase domain profile. | 109 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | Pfam | Protein kinase domain | 111 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | Pfam | Protein kinase domain | 309 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | Pfam | Protein kinase C terminal domain | 435 | 479 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 138 | IPR017441 | GO:0005524 | |
Cma11g00709 | 601 | SMART | serkin_6 | 109 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 417 | 489 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | CDD | STKc_NDR_like | 107 | 480 | - | - | |
Cma11g00709 | 601 | SMART | pkinase_C_6 | 417 | 481 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cma11g00709 | 601 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672|GO:0006468 | |
Cma11g00709 | 601 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 22 | 520 | - | - | |
Cma11g00709 | 601 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00738 | Cma11g00709 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00709 | Cma-Chr11:3453691 | Cma17g00158 | Cma-Chr17:800797 | 0 | dispersed | |
Cma01g01718 | Cma-Chr1:11666023 | Cma11g00709 | Cma-Chr11:3453691 | 0 | wgd | |
Cma10g00738 | Cma-Chr10:3347570 | Cma11g00709 | Cma-Chr11:3453691 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68894 | PF00069 | Pkinase | 1.20E-42 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00709 | K08790 | - | csv:101208238 | 924.85 |