Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00712 ATGAGGAAGGGAGGCTTAAGCAACAATCTCAACCTCAAACTCAGTCTCCCTCAAGAAGACCAATCCATAGCCAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTTGTAAACAGAGATGGAGTTCGGATTGTTTCTCAGAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACACAATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTGAGATGAAAATTGAGGAGTCTTACCGCAGGCAGATTGCTAAAGAACTGAAAATCAATCAATCAGCACAGTGTCCCTATATTGTTGTCTGTTACCAATCTTTCTATGATAATGGGTTGATATATATCATTTTAGAGTACATGGATGGTGGATCTTTAGCTGATTTTCTGAAAAAGGTTAAAAAAATTGAAGAACCATATCTTGCTGCCATTTGTAAGCAGGTGCTGAAGGGGCTGATGTACCTTCACCACGAAAGACACATCATCCATAGGGACTTGAAGCCTTCTAATTTATTAGTAAATCATAGAGGGGAAGTAAAGATTACCGACTTCGGTGTGAGTGCGATTATGGCAAGCACAACTGGAGAGGCTAATACTTTCGTTGGCACATATAACTATATGTCTCCAGAGAGAATTATTGGAAATCGACATGGCAAAAAAAGTGACATTTGGAGCTTGGGGCTGATATTACTTGAATGTGCAACCGGCAAATTCCCTTATTCTCCACCCGAGAAAGATGGAGGATGGGATAACTTTTATGATCTTATGGTAGCCATTGCTGAGGGCGAACCTCCTTCTGCTCCAGCCGACCAGTTTACTCCCAATTTCTGTTCCTTCATTTCTGCATGTTTGCAAACGGAGCCGAAGGATAGACTGTCAGCACGTGAACTTTTGGTATATATTTCTTCCTTCCACATGAACACCCTTTCGTCAAAATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAATGATGCAGGGACTCCACTTGCAACGTTCTAAATTTGATCTGGGGATGGACAAGGATTACGCCGCCATCTCACATTCTCCTGAATGCTGCTTGTTTTACTTCAGTTTGTCTGATTGA 1176 41.67 MRKGGLSNNLNLKLSLPQEDQSIAKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDTIKVIGKGNGGTVQLVQHKWTAQFFALKVIEMKIEESYRRQIAKELKINQSAQCPYIVVCYQSFYDNGLIYIILEYMDGGSLADFLKKVKKIEEPYLAAICKQVLKGLMYLHHERHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMASTTGEANTFVGTYNYMSPERIIGNRHGKKSDIWSLGLILLECATGKFPYSPPEKDGGWDNFYDLMVAIAEGEPPSAPADQFTPNFCSFISACLQTEPKDRLSARELLVYISSFHMNTLSSKCMKIQILTCHLTSMMQGLHLQRSKFDLGMDKDYAAISHSPECCLFYFSLSD 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3472591 3476552 - CmaCh11G007120.1 Cma11g00712 303221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00712 391 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Cma11g00712 391 SUPERFAMILY Protein kinase-like (PK-like) 59 344 IPR011009 -
Cma11g00712 391 PRINTS Tyrosine kinase catalytic domain signature 146 159 IPR001245 GO:0004672|GO:0006468
Cma11g00712 391 PRINTS Tyrosine kinase catalytic domain signature 183 201 IPR001245 GO:0004672|GO:0006468
Cma11g00712 391 PRINTS Tyrosine kinase catalytic domain signature 249 271 IPR001245 GO:0004672|GO:0006468
Cma11g00712 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Cma11g00712 391 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 327 - -
Cma11g00712 391 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Cma11g00712 391 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00712 391 PANTHER MAP KINASE KINASE 3 327 - -
Cma11g00712 391 Pfam Protein kinase domain 73 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00712 391 CDD PKc_MAPKK_plant_like 69 326 - -
Cma11g00712 391 ProSiteProfiles Protein kinase domain profile. 71 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g00712 391 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00741 Cma11g00712 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00712 Cma-Chr11:3472591 Cma12g01275 Cma-Chr12:9924976 3.71E-146 dispersed
Cma10g00741 Cma-Chr10:3371796 Cma11g00712 Cma-Chr11:3472591 0 wgd
Cma11g00712 Cma-Chr11:3472591 Cma12g01322 Cma-Chr12:10107708 3.82E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68895 PF00069 Pkinase 9.80E-68 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00712 K20603 - csv:101204545 591.652