Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00761 | ATGGGAAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTTGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACGCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCCGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTAATGCCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCTTTGGAACACATTACTCGCATCTTTCCAATTCTCAGCTAA | 699 | 44.49 | MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPILS | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3699427 | 3702551 | + | CmaCh11G007610.1 | Cma11g00761 | 303270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00761 | 232 | Pfam | CSN8/PSMD8/EIF3K family | 67 | 194 | IPR033464 | - | |
Cma11g00761 | 232 | Gene3D | - | 128 | 231 | IPR036388 | - | |
Cma11g00761 | 232 | SUPERFAMILY | Winged helix DNA-binding domain | 137 | 229 | IPR036390 | - | |
Cma11g00761 | 232 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 8 | 231 | - | - | |
Cma11g00761 | 232 | Gene3D | ARM repeat; domain 1 | 8 | 125 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
Cma11g00761 | 232 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 8 | 232 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cma11g00761 | 232 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 8 | 231 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cma11g00761 | 232 | SUPERFAMILY | ARM repeat | 10 | 135 | IPR016024 | - | |
Cma11g00761 | 232 | ProSiteProfiles | PCI domain profile. | 47 | 206 | IPR000717 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00795 | Cma11g00761 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00795 | Cma-Chr10:3657752 | Cma11g00761 | Cma-Chr11:3699427 | 4.10E-169 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00761 | K15028 | - | csv:101214255 | 447.203 |