Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00771 ATGGCTACCGTTGCTTCGCCTCCTTCTACGGATCAAGCTGCAGATTTGCTGCAGAAGTTGTCATTGGATGCTCAGGCCAAGCCTGTTGAGATTCCAGAGTCAACGAAAAAGCCAACCGCTAATCAATATGGGTCCATTGATTCTGGGAATGCTGCTATTGGTCAGATTCCAAATGAACGGTCTGTGACTCCATTTTTACAGGACTTTGTGGATCCAAACATGTGCTATGTACCGAATGGATACCCATCTTATTACTATGGAGGTTATGATGGGGCTGGTAATGAATGGGAGGATTATTCTAGATATACAAATTCAGATGGGGTTGAAATGACTTCTGGTGTCTACGGGGATAATGGATCTCTTATGTATCACCATGGTTACGGATATGGACCCTATGGTCCCTATTCACCTGCAGCTTCTCCGGTTCCCTCTATGGGGAATGACGGTCAGCTGTATGGACCTCAGCACTATCAATATCCCCCATATTTTCAACCTCTTACTCCAACCAGTGGGCAGTATACTCCTAGTCCTACTACAGTTCCTCAATCTCAGGGAGATATTTCTACCCCTGCAGCCACTGAGCAAAAGCCCATTTCAGTGGACACAGCTAATCCCAATGGTAATGGCTTGACGAATGGCGGTGGAACGAAAGGAAATAACGGTGCAGCTCCCTTAAAATCCGCATATCATAATTCAACATTGGGTTCTAATGCATATGCTAGGGGTGCTTTGCCAGGACATATTCCTACTTCGGGTTATCAGGATCCGAGATATGGTTTTGATGGGTTGAGATCTTCTTTCCCATGGACGGATGGTTCTATGTACTCAGATGGTCAGTCTAGGCTTGTCAGTAGCTCTACTATCAATTCTTCTATCACTAATGCAAACAACATGCCTTCTTCAAGGAGTCCTAGTTTCCGTCCCGGCTCTCATTATGTAGGTTTTCCCCATGCTAGACCAATGTCAGGAATGAATACCTCCCAGGGTTATATAAATAGGATGTACCCCAATAAATTGTACGGTCAATTTGGAAATACAGTTCGATCTGGTGTAGGGTTTGCCTCACATGGTTATGATTCACGATCTAATGGTCGTGTTTGGCTTGCTGTGGACAACAAATACAAGCCTAGGGGACGAAATGGTGGTTATTATGGATATGGAAATGAAAACATGGATGGTTTGAATGAGCTTAACAGGGGACCAAGAGCTAAGGGTGGCAAGAACCAGAAGGGATTTGTGCCAAGTGTTCTGACTGTGAAGGGACAACTCTTGCCTACGAATGCAGCTGACGATGAAGAAAAGGATAAGGTGTCCACACCAGACCGGGATCAATACAACAAAGTAGATTTTCCTGAGGAATATGCTGAGGCCAGATTTTTTGTTATTAAATCGTACAGCGAAGATGATGTGCATAAAAGCATCAAATATAATGTTTGGGCTAGCACACCTAATGGAAACAAGAAACTCGACGCTGCATACCAGGAAGCCCAAGAGAAGGCTGGTGGTTGCTCCGTCAATACCAGTGGGCAATTTGTTGGCCTTGCTGAGATGGTAGGACCAGTCGACTTTCAGAAGAACTTGGAATACTGGCAACAAGACAAATGGAACGGCTGTTTCCCTGTTAAGTGGCATGTAGTGAAGGATGTTCCCAACAGTCTTTTGAAACACATTATTCTTGAGAACAATGAGAACAAGCCTGTTACCAACAGCAGGGATACACAAGAGGTCAAGCTCGAGCCTGGACTTAAAATGGTTAAAATCTTCAAGGAGCATGTGAGCAAAACATGCATTCTGGACGATTTTGGTTTTTACGAGACCCGACAAAAGACCATTCAAGAGAAGAAAGCCAAGCAACAGCAGTTCAAGAAACAGGTCTGGGAAGGAAAGCCTACTGATGAGAAGAAGGATGTGTCTGAAGTAGTAGTAGACATGAAAACTCCAAAGCCAGTTGAAGCGCCATTGAATGATTTAGTAAAGGAGGAGACACCCAAGACCGCCGAGAACGGATCAGTTTTGAAAACTGGAGATGCCCCGAAGGGTGCTAAACCAGTAACAACAACAACAGCATCAGAGAAGAGAAGTGTAATCATTCGTTAA 2097 44.4 MATVASPPSTDQAADLLQKLSLDAQAKPVEIPESTKKPTANQYGSIDSGNAAIGQIPNERSVTPFLQDFVDPNMCYVPNGYPSYYYGGYDGAGNEWEDYSRYTNSDGVEMTSGVYGDNGSLMYHHGYGYGPYGPYSPAASPVPSMGNDGQLYGPQHYQYPPYFQPLTPTSGQYTPSPTTVPQSQGDISTPAATEQKPISVDTANPNGNGLTNGGGTKGNNGAAPLKSAYHNSTLGSNAYARGALPGHIPTSGYQDPRYGFDGLRSSFPWTDGSMYSDGQSRLVSSSTINSSITNANNMPSSRSPSFRPGSHYVGFPHARPMSGMNTSQGYINRMYPNKLYGQFGNTVRSGVGFASHGYDSRSNGRVWLAVDNKYKPRGRNGGYYGYGNENMDGLNELNRGPRAKGGKNQKGFVPSVLTVKGQLLPTNAADDEEKDKVSTPDRDQYNKVDFPEEYAEARFFVIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQEKAGGCSVNTSGQFVGLAEMVGPVDFQKNLEYWQQDKWNGCFPVKWHVVKDVPNSLLKHIILENNENKPVTNSRDTQEVKLEPGLKMVKIFKEHVSKTCILDDFGFYETRQKTIQEKKAKQQQFKKQVWEGKPTDEKKDVSEVVVDMKTPKPVEAPLNDLVKEETPKTAENGSVLKTGDAPKGAKPVTTTTASEKRSVIIR 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3751220 3756305 - CmaCh11G007710.1 Cma11g00771 303280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00771 698 MobiDBLite consensus disorder prediction 25 48 - -
Cma11g00771 698 PANTHER YTH DOMAIN-CONTAINING PROTEIN-RELATED 16 643 - -
Cma11g00771 698 MobiDBLite consensus disorder prediction 681 698 - -
Cma11g00771 698 MobiDBLite consensus disorder prediction 646 698 - -
Cma11g00771 698 MobiDBLite consensus disorder prediction 427 445 - -
Cma11g00771 698 ProSiteProfiles YTH domain profile. 457 588 IPR007275 GO:0003723
Cma11g00771 698 MobiDBLite consensus disorder prediction 169 218 - -
Cma11g00771 698 Gene3D ph1033 like domains 434 602 - -
Cma11g00771 698 MobiDBLite consensus disorder prediction 169 228 - -
Cma11g00771 698 MobiDBLite consensus disorder prediction 423 445 - -
Cma11g00771 698 Pfam YT521-B-like domain 457 589 IPR007275 GO:0003723
Cma11g00771 698 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 16 643 IPR045168 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00807 Cma11g00771 CCT
Cma10g00807 Cma11g00771 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00771 Cma-Chr11:3751220 Cma17g00393 Cma-Chr17:2217497 9.15E-88 dispersed
Cma10g00807 Cma-Chr10:3735100 Cma11g00771 Cma-Chr11:3751220 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00771 - - cpep:111794042 1265.37