Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00810 ATGGCCGAGGTTATGAACATGGCCGCCCCCGCCACCGCCGCCGACGAGTCGTTGGACCGCCGTCGCGATCGCCAAGAGAAATCGTCTGAGGAGCAACCTCAATCATCTCCGCCGCCGCCTCCGCCTCCGCAGCCAGTTGCTGCTGCTCCTCCTCCTTCAAGAAGACGGGATAGAGATGAGAGAGATAGGAGAGACGATCGGGACGCTGATCGACCTCCGAACCGACGCGGCGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGGGATAGAGATAGAGATAGGGATTATAAACGTCGGAACAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACATTCGCCTCCTAGACGGTCTCCTCCGCCACCTTACAAGCGTTCAAGGAGGGACGATGGTGGCTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGTTTCGGGCCGTGGGATTCTAATTCGGCGATAACCAGGTCCTTCAAACTTGGCATTGCCACTATAGTCTTGCTAAGGTTTGGTTATGATTATGGTGGGGGATATGAGCGGGAAATGCGTGGCCGGCCTGGATATGTTGATGAAAGATCTCTTGGCCGGTACATTGGTCGTTCATCTGGTGGCTATCAAGATTGGGATTCTAATCGTGGTGGGCATGGCGATCCATTCATTGCAGGAGCTGGCCCAAGAGAAGGTTTGATGACATACAAGCAATTTATTCAAGAGCTTGAAGATGATATACTTCCTGCTGAAGCAGAACGCAGATATCAAGAATACAAGTCAGAATATATTACAACTCAGAAACAAGCCTTTTTTGATTCTCATAAAGATGAAGAATGGTTGAGAGATAAATATCATCCTACCAACCTAGTTACTGTCATCGAAAGGAGGAATGAACTTGCACAAAGAACTGCTAAGGACTTTTTGCTTGATCTGCAAAGTGGAACACTGGAGCTAGGTCCTGGGATCAACGTAGCAGCTACAAATAAATCCGGGCAGACTAGTGAACCAAATTCAGATGATGAAGGAGACAATGATGGCAAAAGGAGGCGTCATGGTAGAGGACCAGCCAAAGAATTGGATCTTCTTTCTGCTGCTCCTAAAGCCCACCCTGTTAGTTCGGAACCAAGACGGATTCAAATTGACATTGAACAAGCTCAGGCTCTTGTTCGTAAACTTGATGCTGAAAAGGGAATAGAAGAAAATATTTTGTGTGGTTCTGATAGTGCCAAACTAGGCCGGGACAAAACGCATGGTGGCTCCTCCGGCATAGTCATAATCATACGAGGGTTAACGACTGTCAAAGGCTTGGAGGGTGTTGAGCTACTTGACACGCTTCTCACATATCTTTGGCGCATCCATGGCTTAGATTACTATGGAATTGTTGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGAAAGACCTCTAACATGGCTGGTGGTGCAGATGAGTGGGAGAAGAAACTTGACTTGCGTTGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAGCAATGACTGCCAAGGATAAAATAGAGGCTGCTGCTTTTGAAGCTTTTGATCCATATGTTCGTAAGATAAGAGATGAAAAATATGGTTGGAAGTATGGCTGTGGAGCCAAGGGCTGTACTAAGCTGTTTCATGCCCCTGAGTTTGTGCACAAGCATCTTAACTTGAAACACCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGTTGTATTTCCAAAATTACATGAATGATCCAGATGCTCCTGGAGGGACACCTGTTATGCAACAATCACTTCCGAAGGACAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGGTAGAGGCAATCGCAGGGACCGTGAAAGTTGGGCCAATGGGGTTGACAGACTTGATAGATCTGAGAACCCACAATCAAGTGATTTTCAATCAACAAATGATGGTGCGGATGGTGGAAACCTTGATGATCCTATGTTTGATACTTTTGGAGGCCAAGGCAGACATGTTGCTCCTTTTGCCTCTGAAATGCCACCACCAGTGCTTATGCCGGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCACCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCGTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGATCTCAATTAGGTGGATCTGCTCCAATTCTTGCCCTATCTCCAGGTTTTCGACAGGATCCACGTCGAATACGGAGTTATCAAGACCTAGATGCACCCGAGGACGAAGTCACCGTAATAGATTATAGAAGCTTGTAG 2355 48.07 MAEVMNMAAPATAADESLDRRRDRQEKSSEEQPQSSPPPPPPPQPVAAAPPPSRRRDRDERDRRDDRDADRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRSFGPWDSNSAITRSFKLGIATIVLLRFGYDYGGGYEREMRGRPGYVDERSLGRYIGRSSGGYQDWDSNRGGHGDPFIAGAGPREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLELGPGINVAATNKSGQTSEPNSDDEGDNDGKRRRHGRGPAKELDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDAEKGIEENILCGSDSAKLGRDKTHGGSSGIVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGIVETREAKGLRHVREEGKTSNMAGGADEWEKKLDLRWQERLRGQDPLEAMTAKDKIEAAAFEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDPDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDGRGNRRDRESWANGVDRLDRSENPQSSDFQSTNDGADGGNLDDPMFDTFGGQGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGSQLGGSAPILALSPGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3953212 3961519 - CmaCh11G008100.1 Cma11g00810 303319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00810 784 MobiDBLite consensus disorder prediction 613 645 - -
Cma11g00810 784 MobiDBLite consensus disorder prediction 1 158 - -
Cma11g00810 784 Pfam SERRATE/Ars2, N-terminal domain 246 327 IPR021933 -
Cma11g00810 784 PANTHER ARSENITE-RESISTANCE PROTEIN 2 50 784 IPR039727 GO:0006397
Cma11g00810 784 MobiDBLite consensus disorder prediction 332 387 - -
Cma11g00810 784 Pfam Arsenite-resistance protein 2 485 687 IPR007042 -
Cma11g00810 784 MobiDBLite consensus disorder prediction 728 759 - -
Cma11g00810 784 MobiDBLite consensus disorder prediction 33 50 - -
Cma11g00810 784 ProSitePatterns Zinc finger C2H2 type domain signature. 551 574 IPR013087 -
Cma11g00810 784 MobiDBLite consensus disorder prediction 52 143 - -
Cma11g00810 784 MobiDBLite consensus disorder prediction 15 30 - -
Cma11g00810 784 MobiDBLite consensus disorder prediction 350 367 - -
Cma11g00810 784 MobiDBLite consensus disorder prediction 594 674 - -
Cma11g00810 784 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 50 784 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00979 Cma11g00810 CCT
Cma10g00979 Cma11g00810 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00979 Cma-Chr10:5064998 Cma11g00810 Cma-Chr11:3953212 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00810 - - cmax:111485005 1205.66