Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00822 ATGCATGGGGTGTTTTTGTCAATTTTGATAGAAAATGTACTTCAGCTTCTCATAGGAACCTTCTTTGTCTTCGAAGCCCTCCCTTATTTGGTCCAATGCGATCAAAACCCTTATTTAAGAACTTTGGATGGAATGGAATCTTCGACAGCAAGTGTGTCCCATGTTTCGGGCATTTTGATTCAGCTTGCAGGAAAGTTTCATCCTGGGCTTCTCTTTTCAAGACTTCTGATGAAAAGACTCATGGAATCGGATGCTGCAATGACAGAAGACTTAATTGCTTATAATATTATTCCATTAGATGCTCCTTCTACGACAAATGCTATTGGGTCCATGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAATATTTCAGTGGCCTTCCGAAGTTGCCTGCAGAATATTCTTTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGAAAGACAATGTGTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAGTCTCGCCTTTGTATTCCTGAAGAAAATGAACCAAAATTGGATGAAGCTGCTGTGGAGGGTGTATTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGATGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTTCTTATATGGGGCGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTCCGGGAAATAGATGAGATATTGAGGCATGAGATTGCGCAGCCAGCCAAGAGTTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTTTCCTCTTTATGAGGTCATGGCCGCGGAAGCTGAAAACAATAACAATGGGCGCGCACCACATTCTTCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCGCTTCGATGCTTTGAACTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTCCAAAAGCCAACACCAAAGTCAAAGAATATGCTTGGTAGAAGTCGTCATCAAGGGAAAACTTCATTTGTTGAGCACCGGACTTTTCTTCATCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGGCTCTGACCATAGTTGCATTTAACAATGGAAACTTTAATATGAAGACCCTGCTGGAAGTTCTGAGTCTTGGTCCAACGTTTGTTGTTATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACCTCAAGGCGCCTTGCTATTTCTCGAATTTTTCTTCGTTTCCTTTGGTTCAGTATTGCTTCTGCTTCGATAACGTTTCTTTATGTGAAAGCTCTTCAGGAGGGTAGTAACCCAAATGCAGAAAGGGTGATGTTTAGTCTATATGTAATCGTGATTGGAATATATGGTGGTGTACAGCTTTGCCTCAGTATTCTGATGTATATACCTGCTTTCCATCTTCTTACAAATCAATGTGATCGGTGGCCTCTTGTTCGCTTTATCAAGTGGATGCGACAGGAACGGTACTATGTTGGACACGGGATGTATGAGAGGACTACTGATTTTATCAAGTACATGCTCTTGTGGGTAATAATTCTGGGTGGAAAATTCTCATTTGCCTATTTTCTTCAGATCAAGCCTCTTGTTAAACCTACCAAGCTTATTGTGAACATGAGAGATCTAAAATTTTCGTGGCATGACTTTGTGTCTAAGAATAATCATAATGCTTTGACGGTTCTTAGCTTATGGGCTCCAGTGTTTGCTATTTACATCTTGGACCTTCATGTGTTCTATACCGTTGTATCTGCTATTTGGAGTTTATTAATTGGTGCAAGAGATCGTCTTGGAGAGATTAGATCATTGGAATCGCTTCGTAAGCTGTTTGAGCAGTTTCCCGGAGCCTTTATGAACACTTTACATGCTACTCCCCGGGACAGGATTTCAAATCAGTCTTCAACTCCGGTTGTTGAAAAAGATAAGTTTGATGCTGCCCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTAAGGGAAGAAGATTATATTACAAACTTGGAATCGGAGTTGCTTCAAATGCCTAAAAACAAGGGTAATCTTCCCCTGGTTCAGTGGCCCCTTTTTCTTCTTGCTAGCAAGATATTTCTAGCAAAGGATATTGCTGTTGAGAGACGGGATTCCCAAGATGAGTTGTGGGAGCGTATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGTTACCACGCAATTAAGCTTATCTTAACAGAATTACTGGTTGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACATTCAAGCTAGTATAGCAAACAATTCCATTCAAAATGACTTCCAGCTAAATAAGCTACCACTTGTGATTACAAGAGTAACTGCTCTGACGGGTATTCTGAAAGAGCCAGAAACTCCGGAGCTCGAAATAGGTGCTGTTAAGGCATTTCAAGATTTGTATGATGTTGTGCTCCATGATATCCTTTTTGGCGACAAGAGTGTATTTACTCCATATTATTCTGAGACGGTGCTCTATAGTATGGAGGAACTCCTGAAGAAAAATGAGGATGGCATAACAACTTTGTTTTACTTGCAAAACATTTATCCAGATGAATGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAATCCTAATGACATCCTTGCACTACGATTTTGGGCCTCTTATCGAGGACAGACATTAGCAAGAACTGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAAAGAGGAACTTACGGAGATGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACAGGCAGATCTTAAATTTACATATGTCGTGACCTGTCAGATATATGGAAGACAAAGAGAACAACAAAAACCTGAGGCTTCTGATATTGCATTGCTTATGCAAAGAAATGAAGCTCTTCGTGTTGCCTACATTGAAGATATCGAAACCCAAAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTGGTGAAGGCTGATATCAATGGAAACGATAAGGAGATATATTCCATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTGTTATTTTTACTCGTGGAAATGCTGTTCAGACAATTGACATGAATCAGGACAATTACTTTGAAGAAGCATTGAAAATGAGAAATCTTCTTGAGGAATTTAGTAAAGATCATGGTATTCGTCCTCCTACCATACTGGGTGTCAGGGAACATATATTTACGGGCAGTGTTTCATCTCTGGCTTCATTCATGTCAAATCAAGAAGCTATTTTTGTGACTCTTGGCCAGCGTGTTCTGGCAAATCCCTTGAAAGTTCGTATGCATTATGGCCATCCCGATGTTTTTGATAGGGTTTTCCATCTAACACGAGGTGGCTTCAGCAAGGCCTCCCGTGCTATCAACATTAGTGAAGATATCTATGCAGGATTTAATACAACTTTGCGACAAGGAAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAATCAGATTGCTCTTTTCGAAGGGAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATACAGACTTGGCCAACTGTTTGATTTTTTCCGGATGATGTCATTCTATTTTACGACCGTTGGCTACTACTTTTGTACTATGTTAACGGTGTTGACTGTGTACATTTTTCTCTATGGAAAAGCATATTTGGCACTGTCTGGAGTTAGCGAGGGCATGGAAGATAGAGCCCATATTACAGCTACTGCTGCAATGTCAGCTACTTTGAATAAACAGTTCCTTATCCAAAATGGCATCTTCACTGCAATGCCGATGATCTTGGGATTTATTTTGGAGCAAGGTTTCTTCAGGGCTATTGTCAGCTTTATAACCATGCAGCTTCAGCTTTGTTCTGTCTACTTCACATTCTCTCTTGGCACAAATACTCACTATTTTGGGCGAACAATTCTTCATGGTGGTGCAAAGTATCATGCAACTGGAAGGGGCTTTGTGGTTCGCCATATCAAATTCTCAGAAAATTACAGACTGTACTCTCGCAGCCATTTTGTTAAAGGATTGGAAGTTGTGCTCCTGTTGGTTGTATACATGGCCTACGGATATAGTTCAGATGGTTCGTTAGCATACATGGTTGTCACTCTTAGCAATTGGTTCATGGCAATATCGTGGCTTTTTGCTCCCTATTTGTTCAATCCATCGGGGTTTGAATGGCAGAAGACCGTGGAGGACTTCAGAGAATGGACCAATTGGCTTTTTTCCCGTGGTGGAATTGGTGTTAAGGGTGAAGAAAGCTGGGAAGCATGGTGGGACTCAGAACTGGTATATGGGTTCTCCTGGATTGTGTTAGCTGGGCTTATAGTTCTTTTCAAGGTTTTTACCTTGAGCCAGACAATGACCGTCAATTTTCAGCTTTTGTCGCGTTTTATCCAAGGTCTATCTTTCCTTTTGACTCTGGCTGGCCTGGCCGTTGCGGTTGCTATTACAGACTTGTCACTGCCTGATATACTCGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGCAGCTTGGAAACCTGTGATAAAGAAACTGGGATTCTGGAAATCCATCTGCTCAATTGCTCGTCTGTATGATGCCGGGATGGGGATGCTTGTCTTTATCCCCATTGCATTTCTTTCGTGGTTTCCATTTGTATCGACATTCCAAACTCGTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCAAGGTCTCACTAATTCTTGCTGGAAACCATCCCAACACTGCCCTATGA 4992 41.05 MHGVFLSILIENVLQLLIGTFFVFEALPYLVQCDQNPYLRTLDGMESSTASVSHVSGILIQLAGKFHPGLLFSRLLMKRLMESDAAMTEDLIAYNIIPLDAPSTTNAIGSMAEVQAAVSALKYFSGLPKLPAEYSFPETRSPDILDFLHFIFGFQKDNVSNQREHVVHLLANEQSRLCIPEENEPKLDEAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSDVSKEKKLLFISLYFLIWGEAANVRFLPECLCYIFHHMVREIDEILRHEIAQPAKSCESKDGVSFLDQVIFPLYEVMAAEAENNNNGRAPHSSWRNYDDFNEYFWSLRCFELSWPWHKGKSFFQKPTPKSKNMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQALTIVAFNNGNFNMKTLLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRLAISRIFLRFLWFSIASASITFLYVKALQEGSNPNAERVMFSLYVIVIGIYGGVQLCLSILMYIPAFHLLTNQCDRWPLVRFIKWMRQERYYVGHGMYERTTDFIKYMLLWVIILGGKFSFAYFLQIKPLVKPTKLIVNMRDLKFSWHDFVSKNNHNALTVLSLWAPVFAIYILDLHVFYTVVSAIWSLLIGARDRLGEIRSLESLRKLFEQFPGAFMNTLHATPRDRISNQSSTPVVEKDKFDAARFSPFWNEIIASLREEDYITNLESELLQMPKNKGNLPLVQWPLFLLASKIFLAKDIAVERRDSQDELWERISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQASIANNSIQNDFQLNKLPLVITRVTALTGILKEPETPELEIGAVKAFQDLYDVVLHDILFGDKSVFTPYYSETVLYSMEELLKKNEDGITTLFYLQNIYPDEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDAIPCTDATDTRGFDLSPEARAQADLKFTYVVTCQIYGRQREQQKPEASDIALLMQRNEALRVAYIEDIETQKDGKVHKEFYSKLVKADINGNDKEIYSIKLPGDPKLGEGKPENQNHAVIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFSKDHGIRPPTILGVREHIFTGSVSSLASFMSNQEAIFVTLGQRVLANPLKVRMHYGHPDVFDRVFHLTRGGFSKASRAINISEDIYAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALSGVSEGMEDRAHITATAAMSATLNKQFLIQNGIFTAMPMILGFILEQGFFRAIVSFITMQLQLCSVYFTFSLGTNTHYFGRTILHGGAKYHATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLVVYMAYGYSSDGSLAYMVVTLSNWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFSRGGIGVKGEESWEAWWDSELVYGFSWIVLAGLIVLFKVFTLSQTMTVNFQLLSRFIQGLSFLLTLAGLAVAVAITDLSLPDILACILAFVPTGWGILSIAAAWKPVIKKLGFWKSICSIARLYDAGMGMLVFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLKVSLILAGNHPNTAL 1663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4076027 4107873 - CmaCh11G008220.1 Cma11g00822 303331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00822 1663 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 227 334 IPR026899 -
Cma11g00822 1663 PANTHER BNAC03G35120D PROTEIN 77 858 - -
Cma11g00822 1663 SMART FKS1_dom1_2 225 337 IPR026899 -
Cma11g00822 1663 PANTHER BNAC03G35120D PROTEIN 861 1508 - -
Cma11g00822 1663 PANTHER BNAC03G35120D PROTEIN 1508 1662 - -
Cma11g00822 1663 Pfam 1,3-beta-glucan synthase component 863 1502 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cma11g00822 1663 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 77 858 - -
Cma11g00822 1663 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 861 1508 - -
Cma11g00822 1663 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1508 1662 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00822 Cma-Chr11:4076027 Cma11g00050 Cma-Chr11:223878 0 dispersed
Cma11g00821 Cma-Chr11:4029859 Cma11g00822 Cma-Chr11:4076027 0 tandem
Cma11g00822 Cma-Chr11:4076027 Cma11g00823 Cma-Chr11:4110514 1.79E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00822 K11000 - psom:113279372 1868.97