Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00827 ATGGAAGACGAAGCATCCTCCACCTTCATTTCCTTCACTAAGTCCCCTCTCCTCATAGATGAAGTTTCAGATTCTAATTTCTCAGATTATGCCATACCTGATGCCAAGCGGATGAGATTAGACCATGATCTTAATGATGTAGCCACCGTCGAGAAATTTAAAGGCGTCGTGCCGCAACAGAATGGCCGTTGGGGAGCGCAGATCTATGCGAACCACCAGAGGATCTGGCTCGGTACCTTCAAATCGGAGAAAGACGCTGCCATGGCTTATGATAGTGCCGCTATCAAGCTTCGCACCAGAGACTCTCACCGGAATTTCCCATGGACTCGCCTATCAATCGAGGAGCCGAAATTTCAAAGCAAATTCTCCATTGACGCCGTTCTCAGCATGATCAAAGACGGATCGTATTCCTCGAAATTTTCCGCCTACTTACGAACGAAGTCTCAAATTTGCGACTCGAATATACAGAACCTCCAAACTAGTGAAAATGGCGACCGCGATGGCCATTTCTCTTGCAGCCATCTATTCCAGAAGGAATTAACACCGAGCGACGTCGGAAAGCTCAATCGACTCGTAATCCCGAAAAAATACGCAGTGAAACATTTTCCGTACATTAGCGAGAGCGCAGAGGAGAATAGCGACGATATCGAAATCGTCTTCTACGATACATCAATGAAGACATGGAAGTTCCGATACTGTTACTGGAGGAGCAGCCAAAGCTTCGTCTTCACCAGAGGCTGGAATCGATTCGTGAAAGAGAAAAAGCTGAAGGCGAATGACATCATCACGTTTTACACATACGAAAGCTGCGAAAGAGACAAAAATGGCGGAACATTGATTTTCATTGACGTAATCTACAAGAAACCGGAAGATGACCAGAGCGAGAGTAGTTGCTTAGCGGCGGAGAGAGAGAGTATTAAGCACGAACAATTGCAGAGAGAATTAGGGCTTGATCGGGAGGACTGCCCGCTTGATCTTGTTGCAGTATCCATTGCCGCGCTCTATCCGTCGCCAAGATATATAGCCATCTTGTATAAGATGTCGACAACCGGAGCCTATAATATTCCGATGTGCACACTGAGAAACAGCAAGCTCTCTTCTGCTAAACTTAAAAATGTCTACAATGTCTCCGCTTTGAAACACTTTCAGCTGAATTCCACCACTTTATCTTCTACAAGAACTGGGAAGATTGCAACTAGTGCTATGTCTGGATCTAATGAACACCAACCAGTCTCTGGGTTGCCGATTGATTTAAAAGGTAAGCGGGCATTCATTGCTGGTGTAGCGCTGATGACAATGGTTATGGTTGGGCAATAG 1317 45.79 MEDEASSTFISFTKSPLLIDEVSDSNFSDYAIPDAKRMRLDHDLNDVATVEKFKGVVPQQNGRWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAIKLRTRDSHRNFPWTRLSIEEPKFQSKFSIDAVLSMIKDGSYSSKFSAYLRTKSQICDSNIQNLQTSENGDRDGHFSCSHLFQKELTPSDVGKLNRLVIPKKYAVKHFPYISESAEENSDDIEIVFYDTSMKTWKFRYCYWRSSQSFVFTRGWNRFVKEKKLKANDIITFYTYESCERDKNGGTLIFIDVIYKKPEDDQSESSCLAAERESIKHEQLQRELGLDREDCPLDLVAVSIAALYPSPRYIAILYKMSTTGAYNIPMCTLRNSKLSSAKLKNVYNVSALKHFQLNSTTLSSTRTGKIATSAMSGSNEHQPVSGLPIDLKGKRAFIAGVALMTMVMVGQ 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4146868 4151511 + CmaCh11G008270.1 Cma11g00827 303336

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00827 438 CDD AP2 52 109 IPR001471 GO:0003700|GO:0006355
Cma11g00827 438 SUPERFAMILY DNA-binding domain 52 108 IPR016177 GO:0003677
Cma11g00827 438 SMART B3_2 176 275 IPR003340 GO:0003677
Cma11g00827 438 SUPERFAMILY DNA-binding pseudobarrel domain 174 270 IPR015300 -
Cma11g00827 438 SMART rav1_2 52 113 IPR001471 GO:0003700|GO:0006355
Cma11g00827 438 ProSiteProfiles B3 DNA-binding domain profile. 176 288 IPR003340 GO:0003677
Cma11g00827 438 CDD B3_DNA 174 281 IPR003340 GO:0003677
Cma11g00827 438 ProSiteProfiles AP2/ERF domain profile. 52 107 IPR001471 GO:0003700|GO:0006355
Cma11g00827 438 Pfam B3 DNA binding domain 176 267 IPR003340 GO:0003677
Cma11g00827 438 Pfam AP2 domain 52 99 IPR001471 GO:0003700|GO:0006355
Cma11g00827 438 Gene3D - 166 293 IPR015300 -
Cma11g00827 438 Gene3D AP2/ERF domain 51 108 IPR036955 GO:0003700|GO:0006355
Cma11g00827 438 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 20 316 IPR044800 GO:0003700
Cma11g00827 438 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 20 316 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00827 K09287 RAV; RAV-like factor - csv:101219913 543.117
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00479 Cma-Chr10:2171824 Cma11g00827 Cma-Chr11:4146868 3.09E-98 dispersed
Cma11g00470 Cma-Chr11:2279209 Cma11g00827 Cma-Chr11:4146868 7.90E-106 dispersed
Cma11g00827 Cma-Chr11:4146868 Cma18g01042 Cma-Chr18:8666735 3.23E-55 dispersed
Cma10g00655 Cma-Chr10:2966036 Cma11g00827 Cma-Chr11:4146868 6.51E-07 transposed
Cma11g00827 Cma-Chr11:4146868 Cma02g01220 Cma-Chr2:7203169 4.83E-09 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma14g00333 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cma06g00497 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cma17g00554 . 73 184 RAV Transcription Factor Family AT2G36080 72.2 2.8e-42 169.1
Cma08g00001 . 74 192 RAV Transcription Factor Family AT2G36080 66.4 5.3e-41 164.9
Cma04g00739 . 39 148 RAV Transcription Factor Family AT2G36080 70.8 5.9e-40 161.4
Cma02g00959 . 47 156 RAV Transcription Factor Family AT2G36080 69.0 1.5e-38 156.8
Cma16g00597 CST 28 134 RAV Transcription Factor Family AT2G36080 69.4 5.5e-38 154.8
Cma18g01042 CCT,ECH 165 294 RAV Transcription Factor Family AT2G36080 58.8 7.2e-38 154.5
Cma15g01340 . 49 158 RAV Transcription Factor Family AT2G36080 69.0 9.4e-38 154.1
Cma04g01521 . 177 300 RAV Transcription Factor Family AT2G36080 60.0 6.1e-37 151.4
Cma02g00959 . 47 163 RAV Transcription Factor Family AT2G46870 86.4 5.2e-55 212.2
Cma15g01340 . 21 166 RAV Transcription Factor Family AT2G46870 70.1 3.7e-53 206.1
Cma08g00001 . 79 318 RAV Transcription Factor Family AT2G46870 52.2 5.4e-52 202.2
Cma04g00739 . 39 149 RAV Transcription Factor Family AT2G46870 83.9 3.5e-51 199.5
Cma16g00597 CST 28 135 RAV Transcription Factor Family AT2G46870 82.1 3.6e-48 189.5
Cma04g01521 . 179 291 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cma18g01042 CCT,ECH 171 283 RAV Transcription Factor Family AT2G46870 66.4 4.0e-39 159.5
Cma06g00497 CST 35 169 RAV Transcription Factor Family AT2G46870 58.6 5.2e-39 159.1
Cma14g00333 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cma04g02012 CCT,CST,ECH 172 277 RAV Transcription Factor Family AT2G46870 68.8 2.9e-37 153.3
Cma06g00497 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.2e-45 180.6
Cma14g00333 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cma08g00001 . 65 202 RAV Transcription Factor Family AT3G11580 57.7 5.4e-41 165.2
Cma17g00554 . 69 187 RAV Transcription Factor Family AT3G11580 62.3 1.3e-39 160.6
Cma02g00959 . 47 158 RAV Transcription Factor Family AT3G11580 62.6 4.3e-38 155.6
Cma16g00597 CST 10 134 RAV Transcription Factor Family AT3G11580 57.7 1.6e-37 153.7
Cma04g00739 . 39 148 RAV Transcription Factor Family AT3G11580 62.0 2.8e-37 152.9
Cma02g00959 . 23 163 RAV Transcription Factor Family AT3G61970 70.8 2.0e-51 200.3
Cma17g00554 . 74 294 RAV Transcription Factor Family AT3G61970 53.8 4.4e-51 199.1
Cma15g01340 . 29 175 RAV Transcription Factor Family AT3G61970 67.3 1.3e-50 197.6
Cma08g00001 . 77 188 RAV Transcription Factor Family AT3G61970 82.6 4.1e-49 192.6
Cma04g00739 . 31 169 RAV Transcription Factor Family AT3G61970 67.6 2.0e-48 190.3
Cma16g00597 CST 17 135 RAV Transcription Factor Family AT3G61970 74.8 1.7e-47 187.2
Cma04g01521 . 174 291 RAV Transcription Factor Family AT3G61970 67.2 6.0e-40 162.2
Cma18g01042 CCT,ECH 167 283 RAV Transcription Factor Family AT3G61970 64.4 2.5e-38 156.8
Cma04g02012 CCT,CST,ECH 165 277 RAV Transcription Factor Family AT3G61970 66.1 3.6e-37 152.9
Cma08g00001 . 70 195 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cma02g00959 . 48 163 RAV Transcription Factor Family AT4G01500 66.7 6.0e-41 165.6
Cma15g01340 . 30 166 RAV Transcription Factor Family AT4G01500 59.2 1.3e-40 164.5
Cma16g00597 CST 15 134 RAV Transcription Factor Family AT4G01500 62.7 8.7e-40 161.8
Cma04g00739 . 40 167 RAV Transcription Factor Family AT4G01500 60.7 1.6e-38 157.5
Cma14g00333 . 32 231 RAV Transcription Factor Family AT5G06250 54.6 1.1e-53 207.6
Cma06g00497 CST 27 232 RAV Transcription Factor Family AT5G06250 51.5 3.6e-52 202.6
Cma08g00001 . 80 188 RAV Transcription Factor Family AT5G06250 66.4 7.0e-40 161.8
Cma04g00739 . 40 148 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cma16g00597 CST 29 134 RAV Transcription Factor Family AT5G06250 67.5 1.0e-38 157.9
Cma02g00959 . 48 156 RAV Transcription Factor Family AT5G06250 65.5 1.3e-38 157.5
Cma15g01340 . 50 158 RAV Transcription Factor Family AT5G06250 64.7 1.5e-37 154.1
Cma04g01521 . 177 287 RAV Transcription Factor Family AT5G06250 62.2 3.2e-37 152.9
Cma18g01042 CCT,ECH 168 277 RAV Transcription Factor Family AT5G06250 62.7 9.4e-37 151.4
Cma11g00470 . 45 322 RAV Transcription Factor Family AT1G50680 53.5 3.9e-80 295.8
Cma10g00479 . 87 380 RAV Transcription Factor Family AT1G50680 50.2 2.1e-78 290.0
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G50680 59.9 5.3e-77 285.4
Cma11g00470 . 37 322 RAV Transcription Factor Family AT1G51120 52.2 5.1e-83 305.4
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G51120 62.2 3.8e-78 289.3
Cma10g00479 . 83 380 RAV Transcription Factor Family AT1G51120 50.2 5.0e-78 288.9
Cma18g01042 CCT,ECH 17 335 RAV Transcription Factor Family AT1G13260 62.6 1.6e-100 363.6
Cma04g01521 . 25 324 RAV Transcription Factor Family AT1G13260 65.9 1.0e-99 360.9
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT1G13260 68.1 9.1e-93 337.8
Cma04g02012 CCT,CST,ECH 40 326 RAV Transcription Factor Family AT1G13260 62.4 7.2e-90 328.2
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 4.9e-38 156.0
Cma17g00554 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.1e-37 154.8
Cma08g00001 . 81 189 RAV Transcription Factor Family AT1G13260 70.0 1.4e-37 154.5
Cma02g00959 . 49 176 RAV Transcription Factor Family AT1G13260 62.0 7.1e-37 152.1
Cma14g00333 . 24 154 RAV Transcription Factor Family AT1G13260 60.3 2.1e-36 150.6
Cma04g01521 . 9 310 RAV Transcription Factor Family AT3G25730 63.4 3.8e-96 349.0
Cma18g01042 CCT,ECH 17 302 RAV Transcription Factor Family AT3G25730 64.8 1.2e-94 344.0
Cma04g02012 CCT,CST,ECH 1 296 RAV Transcription Factor Family AT3G25730 60.1 1.7e-88 323.6
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.9 5.6e-87 318.5
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cma18g01042 CCT,ECH 19 336 RAV Transcription Factor Family AT1G68840 62.8 1.5e-106 383.6
Cma04g01521 . 1 324 RAV Transcription Factor Family AT1G68840 60.2 3.4e-103 372.5
Cma04g02012 CCT,CST,ECH 40 327 RAV Transcription Factor Family AT1G68840 61.5 3.9e-91 332.4
Cma15g00991 CCT,CST,ECH 1 302 RAV Transcription Factor Family AT1G68840 58.4 8.7e-91 331.3
Cma08g00001 . 64 189 RAV Transcription Factor Family AT1G68840 60.1 2.7e-39 160.2
Cma17g00554 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.0e-38 158.3
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.6e-38 155.2
Cma16g00597 CST 20 141 RAV Transcription Factor Family AT1G68840 63.0 2.5e-37 153.7
Cma02g00959 . 48 156 RAV Transcription Factor Family AT1G68840 69.4 5.6e-37 152.5
Cma04g00739 . 40 158 RAV Transcription Factor Family AT1G68840 63.6 9.5e-37 151.8
Cma14g00333 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.2e-36 151.4
Cma04g01521 . 9 310 RAV Transcription Factor Family AT3G25730 63.4 3.8e-96 349.0
Cma18g01042 CCT,ECH 17 302 RAV Transcription Factor Family AT3G25730 64.8 1.2e-94 344.0
Cma04g02012 CCT,CST,ECH 1 296 RAV Transcription Factor Family AT3G25730 60.1 1.7e-88 323.6
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.9 5.6e-87 318.5
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cma11g00470 . 37 322 RAV Transcription Factor Family AT1G51120 52.2 5.1e-83 305.4
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G51120 62.2 3.8e-78 289.3
Cma10g00479 . 83 380 RAV Transcription Factor Family AT1G51120 50.2 5.0e-78 288.9
Cma06g00497 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.2e-45 180.6
Cma14g00333 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cma08g00001 . 65 202 RAV Transcription Factor Family AT3G11580 57.7 5.4e-41 165.2
Cma17g00554 . 69 187 RAV Transcription Factor Family AT3G11580 62.3 1.3e-39 160.6
Cma02g00959 . 47 158 RAV Transcription Factor Family AT3G11580 62.6 4.3e-38 155.6
Cma16g00597 CST 10 134 RAV Transcription Factor Family AT3G11580 57.7 1.6e-37 153.7
Cma04g00739 . 39 148 RAV Transcription Factor Family AT3G11580 62.0 2.8e-37 152.9
Cma08g00001 . 70 195 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cma02g00959 . 48 163 RAV Transcription Factor Family AT4G01500 66.7 6.0e-41 165.6
Cma15g01340 . 30 166 RAV Transcription Factor Family AT4G01500 59.2 1.3e-40 164.5
Cma16g00597 CST 15 134 RAV Transcription Factor Family AT4G01500 62.7 8.7e-40 161.8
Cma04g00739 . 40 167 RAV Transcription Factor Family AT4G01500 60.7 1.6e-38 157.5
Cma14g00333 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cma06g00497 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cma17g00554 . 73 184 RAV Transcription Factor Family AT2G36080 72.2 2.8e-42 169.1
Cma08g00001 . 74 192 RAV Transcription Factor Family AT2G36080 66.4 5.3e-41 164.9
Cma04g00739 . 39 148 RAV Transcription Factor Family AT2G36080 70.8 5.9e-40 161.4
Cma02g00959 . 47 156 RAV Transcription Factor Family AT2G36080 69.0 1.5e-38 156.8
Cma16g00597 CST 28 134 RAV Transcription Factor Family AT2G36080 69.4 5.5e-38 154.8
Cma18g01042 CCT,ECH 165 294 RAV Transcription Factor Family AT2G36080 58.8 7.2e-38 154.5
Cma15g01340 . 49 158 RAV Transcription Factor Family AT2G36080 69.0 9.4e-38 154.1
Cma04g01521 . 177 300 RAV Transcription Factor Family AT2G36080 60.0 6.1e-37 151.4
Cma14g00333 . 32 231 RAV Transcription Factor Family AT5G06250 54.6 1.1e-53 207.6
Cma06g00497 CST 27 232 RAV Transcription Factor Family AT5G06250 51.5 3.6e-52 202.6
Cma08g00001 . 80 188 RAV Transcription Factor Family AT5G06250 66.4 7.0e-40 161.8
Cma04g00739 . 40 148 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cma16g00597 CST 29 134 RAV Transcription Factor Family AT5G06250 67.5 1.0e-38 157.9
Cma02g00959 . 48 156 RAV Transcription Factor Family AT5G06250 65.5 1.3e-38 157.5
Cma15g01340 . 50 158 RAV Transcription Factor Family AT5G06250 64.7 1.5e-37 154.1
Cma04g01521 . 177 287 RAV Transcription Factor Family AT5G06250 62.2 3.2e-37 152.9
Cma18g01042 CCT,ECH 168 277 RAV Transcription Factor Family AT5G06250 62.7 9.4e-37 151.4
Cma02g00959 . 47 163 RAV Transcription Factor Family AT2G46870 86.4 5.2e-55 212.2
Cma15g01340 . 21 166 RAV Transcription Factor Family AT2G46870 70.1 3.7e-53 206.1
Cma08g00001 . 79 318 RAV Transcription Factor Family AT2G46870 52.2 5.4e-52 202.2
Cma04g00739 . 39 149 RAV Transcription Factor Family AT2G46870 83.9 3.5e-51 199.5
Cma16g00597 CST 28 135 RAV Transcription Factor Family AT2G46870 82.1 3.6e-48 189.5
Cma04g01521 . 179 291 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cma18g01042 CCT,ECH 171 283 RAV Transcription Factor Family AT2G46870 66.4 4.0e-39 159.5
Cma06g00497 CST 35 169 RAV Transcription Factor Family AT2G46870 58.6 5.2e-39 159.1
Cma14g00333 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cma04g02012 CCT,CST,ECH 172 277 RAV Transcription Factor Family AT2G46870 68.8 2.9e-37 153.3
Cma11g00470 . 45 322 RAV Transcription Factor Family AT1G50680 53.5 3.9e-80 295.8
Cma10g00479 . 87 380 RAV Transcription Factor Family AT1G50680 50.2 2.1e-78 290.0
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G50680 59.9 5.3e-77 285.4
Cma02g00959 . 23 163 RAV Transcription Factor Family AT3G61970 70.8 2.0e-51 200.3
Cma17g00554 . 74 294 RAV Transcription Factor Family AT3G61970 53.8 4.4e-51 199.1
Cma15g01340 . 29 175 RAV Transcription Factor Family AT3G61970 67.3 1.3e-50 197.6
Cma08g00001 . 77 188 RAV Transcription Factor Family AT3G61970 82.6 4.1e-49 192.6
Cma04g00739 . 31 169 RAV Transcription Factor Family AT3G61970 67.6 2.0e-48 190.3
Cma16g00597 CST 17 135 RAV Transcription Factor Family AT3G61970 74.8 1.7e-47 187.2
Cma04g01521 . 174 291 RAV Transcription Factor Family AT3G61970 67.2 6.0e-40 162.2
Cma18g01042 CCT,ECH 167 283 RAV Transcription Factor Family AT3G61970 64.4 2.5e-38 156.8
Cma04g02012 CCT,CST,ECH 165 277 RAV Transcription Factor Family AT3G61970 66.1 3.6e-37 152.9
Cma18g01042 CCT,ECH 17 335 RAV Transcription Factor Family AT1G13260 62.6 1.6e-100 363.6
Cma04g01521 . 25 324 RAV Transcription Factor Family AT1G13260 65.9 1.0e-99 360.9
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT1G13260 68.1 9.1e-93 337.8
Cma04g02012 CCT,CST,ECH 40 326 RAV Transcription Factor Family AT1G13260 62.4 7.2e-90 328.2
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 4.9e-38 156.0
Cma17g00554 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.1e-37 154.8
Cma08g00001 . 81 189 RAV Transcription Factor Family AT1G13260 70.0 1.4e-37 154.5
Cma02g00959 . 49 176 RAV Transcription Factor Family AT1G13260 62.0 7.1e-37 152.1
Cma14g00333 . 24 154 RAV Transcription Factor Family AT1G13260 60.3 2.1e-36 150.6
Cma18g01042 CCT,ECH 19 336 RAV Transcription Factor Family AT1G68840 62.8 1.5e-106 383.6
Cma04g01521 . 1 324 RAV Transcription Factor Family AT1G68840 60.2 3.4e-103 372.5
Cma04g02012 CCT,CST,ECH 40 327 RAV Transcription Factor Family AT1G68840 61.5 3.9e-91 332.4
Cma15g00991 CCT,CST,ECH 1 302 RAV Transcription Factor Family AT1G68840 58.4 8.7e-91 331.3
Cma08g00001 . 64 189 RAV Transcription Factor Family AT1G68840 60.1 2.7e-39 160.2
Cma17g00554 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.0e-38 158.3
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.6e-38 155.2
Cma16g00597 CST 20 141 RAV Transcription Factor Family AT1G68840 63.0 2.5e-37 153.7
Cma02g00959 . 48 156 RAV Transcription Factor Family AT1G68840 69.4 5.6e-37 152.5
Cma04g00739 . 40 158 RAV Transcription Factor Family AT1G68840 63.6 9.5e-37 151.8
Cma14g00333 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.2e-36 151.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002261 1 6 1 2 2 2 3 2 1 2 2 2 3 2 1 3 2 2 3 2 2 2 2 2 2 2 2 3 1 1 63
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35840 PF02362 B3 9.60E-27 CL0405 Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma11g00827 Cma_Chr11 FPKM 0.0 0.0 0.585429 1.219994 0.612255 0.370223 1.059485 0.261094 0.244981 0.471406