Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g00828 ATGAGGCCTGTCAAACGCGAACCCGCCGCTAGCAGCCGCAGTAATCAGAGTAAAGGCGGCGACGCCGTCGATGCTGCGAATTTAAGAGATGTTAAGCGGGCGAGGGTTGCTCGGGAGAAAGAGAACATCGGTGATGGCAACATGGCTGAAGCAGAAGAGGGTCAACAAGGCTTGACGAAGCGGCGGGTTCTCCGGTCTCGGTATCTTGCGGTCATTCACGAGATTAGTGAAAGGAGAGAGGATTTGACGAAGGATTCGGACAAGTTCAATGTTATCATCAATGAAGTGGAAAAGTTGCACGAGCAAGTTCAGAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCCTTGCAAGATATTGCAAACTCCTTGGTGACCTCTATTAAGTCGCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTGAGCTGTCTGCTCAAAGAATTTGCTGACATTGAAGGCGGTATAACATCCGAAGAAAACGATCCGATTTCTATCAGTTGGAAAGATATCGGATTAAGCGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACCATGCTTGGACCTATGAGCACTCAGTTGAAGCAGCGAAAGACTAATATTGCCCGGAAACGTTCAAGGCCTACTGAAAGTTCGAGACCTGCAGAGGTTGATGAAGATGGATCTGAAGAAAAAACGGATACAGATAAGAACATGAGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAGACTTGAACATTTGATATTGAATAGAAACTCTTTTGCACAGACAGTAGAGAACTTATTTGCTCTCTCCTTTCTGGTCAAGGATGGTCGGGCCGAGATAACTATTGATAAAAATGGTTCTCATTTTGTATCTCCGAAGAATGCCCCGGCCCATAGTGCCATTATGTCACACGAAGTTAATTATAGTCACTTTGTATTCAGATTCGATTTTAAGGATTGGAAGTTGATGATGGATATAGTTCCAGTTGGAGAGGAGTTGATGCCCCACAGGAACTTTCTAAATACAGCACCAATGCCCCAAGCAGAAGCAGCCACGGACGATTCTGAATCAGCGGCATTGCCTACCACGCCAATTCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATGCAATCTGTTGTTGAGGATTCCCCTGATAATGATGGCGCTCATTCAGGACCAACTGCAATGTTGAGGTGCAAGAAAAAGCTTAGTCAAGGTTAG 1218 44.99 MRPVKREPAASSRSNQSKGGDAVDAANLRDVKRARVAREKENIGDGNMAEAEEGQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENDPISISWKDIGLSVSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNMSIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKLMMDIVPVGEELMPHRNFLNTAPMPQAEAATDDSESAALPTTPIRKLSRNRGLVMQSVVEDSPDNDGAHSGPTAMLRCKKKLSQG 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4150177 4153419 - CmaCh11G008280.1 Cma11g00828 303337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g00828 405 MobiDBLite consensus disorder prediction 197 228 - -
Cma11g00828 405 MobiDBLite consensus disorder prediction 204 228 - -
Cma11g00828 405 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 30 402 - -
Cma11g00828 405 Pfam Nse4 C-terminal 246 333 IPR014854 -
Cma11g00828 405 MobiDBLite consensus disorder prediction 346 405 - -
Cma11g00828 405 MobiDBLite consensus disorder prediction 1 28 - -
Cma11g00828 405 PANTHER UNCHARACTERIZED 30 402 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00964 Cma11g00828 CCT
Cma10g00964 Cma11g00828 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00964 Cma-Chr10:4916574 Cma11g00828 Cma-Chr11:4150177 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g00828 K22825 - csv:101220149 650.588