Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g00930 | ATGAGGAAATTAGGAGTATTGGTGCTGTTTTGGAGTGCATCGATACTTCTTTGGAACCGTACTCGTTGGCTTACAGAAGCAGCTCCGGCGGGTTCGGCGGTGACTCACTTGCCCGGCTTCACGGCCAGCGATTTTCCGTCCAAACACCATTCCGGGTATATAAATATCGACGGAGGTTCGAGTGGGAAGAGGCTGTTTTATTACTTTGTGACGTCGCAACGGAGCCCCGCCGCCGATCCGGTGGTTCTCTGGCTCAACGGCGGCCCTGGTTGCTCTAGCTTCGACGGCTTTGTTTATGAACACGGACCTTTCAATTTTGGAGAAGGAAATCCCAAGGGAACACTCCCTACCTTACATCTTAATCCTTACAGCTGGTCCAAGGTTTCAAATATTATATATTTGGATTCCCCAGCTGGTGTTGGCTTATCCTATTCCCCAAACGAGGCCAATTACATTACAGGAGATCTTCAAACGGCTTCTGATACACACATTTTTATTCTGAGATGGTTCGAGGAATTTCCAGAATTTCTTCAAAATCCATTTTACATAGCAGGAGAGTCCTTCGCAGGCATCTATGTCCCCACCCTTGCTTCTCAAGTAGTCCAAGGGCTTAAAAATGGGGCTGTGCCAATTATAAATTTCAAGGGTTACATGGTGGGGAATGGTGTGACGGACGAAAAGTTTGATGGCAATGCTCTCGTCCCTTTTGCACATGGAATGGCCCTAATCTCTGACGCTATGTTTCAGGAAGCTGAAGCTTCTTGTGGTGGAAATTACTACGACCCTCAAACGGAGGCTTGTTTTGACAAGCTTGACCGCGTTGACCAGGATTTGGAGAGGCTAAACGTATACGACATCTTGGAGCCATGTTTTCACATAGGAAACACGAGCCAAAGCTTGCCTACAAGTTTTCAACAGCTTGGGCAAACGGAGAAGCCTTTAGCCATAAGGAAGCGGATGTTTGGTCGGGCTTGGCCTTTTAGGGCGCCAGTGCGCGATGGGATCGTCCCTCTTTGGTCTGAACTAGCTGAGACCGACACCAAATCTCATGTACCTTGTCTGAATGATGAAGTAGCGACTATTTGGTTGAACGACGAGTCGGTGAGAGAAGCCATTCACGCCGAGCCGGAAAGTGTGGCAGGTCCATGGGAGCTCTGTACTCATAGAATAAGGTACAGTCACAATGCTGGAAGTATGATTCCTTATCATAAGAACCTTACTTCTCAAGGTTTTAGAGCTCTTATTTTCAGTGGAGACCATGATATGTGTGTGCCATACACTGGAAGCCAAGCATGGACTTCTTCACTTGGCTACAAAATTATTGATGAATGGAGGCCATGGTTCTCCAATGCCCAAGTTGCAGGGTATTTACAAGAATATGAACACAATCTCACTTTCCTTACCATAAAGGGAGCTGGACATACTGTACCAGAATACAAACCTAGAGAGGCATTAGATTTCTACACTCGATGTCAAAACTCGTTTACAACCCGCGAAAGGATTCTTCATCGGTTGCTTGCTTGTTTGTTGAATCTTCCGGTCGTTTTCCCCACTCAATCATTCCACCCCCCCTTTGGTCGTCTTCAAATCCGAAGTCGCTGTCTAAAGAGGAATTCATTCTGCCAAATTCTTAATTCATCTCCAATTTTGTTTCCTACTATTGGAGTCCCCATTTCCAGAATGGGGCCTTGCTTGTCTGTTGTATGTAAGAGGGCCATGGCTGGTTCCTCTGTATCTTCTGTGCTGAAAGCAAGTAAACTGAAAGACTCAGAAAATGGGCTGGAGTCCAAGGATTCTATGTTTGAGCAGCAGAGTGAAGAAGCAACAGTTCATCGAATTCCGGGTCGGATGTTCTTGAATGGATCCAGTGAAGTTGCCTCACTTTATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGCACTTTGGCTCAAGAACGGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTAACGGTCATCTGGTCGCGAAAAGAGTGAGGGATTCTCTGCCCCTGAAACTGACTGCGCATTGGGAAGCTAATGCAAGCAATGAGGATATTTCAAAAGAGTTTGGTCATAAAACAGGTCTCAACAATGAAAATTCTGGGTTAGAAACTGATTGGAAGGAAGCTAGTTCTCCCCTTAAGCACCATGAAATTTCTGAAAATATGAAGGAATCATTTTTGAAGGCTTTTAAGATAATGGATGTGGAACTCAAAATGCAACCAAACATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGATCGAGATCTTGTTATTGGAAATGTGGGGGACTCGCGAGCTGTGTTGGGTACCAGAGACAAGGATAATTGTCTTCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGCTGAAGCAGAGAGAATTCTCCAATGCAAGGGTCGGGTATTTGCCCATGAGGATGAACCAGAAGTTGCTAGGGTATGGCTTCCAAACAATGATTCCCCTGGGCTGGCAATGGCACGATCTTTCGGCGACTTTTGCCTCAAGGACTTCGGTCTAATTTCTGTTCCTGAAATTTCGTATCGGTTTCTGACAGACGAAGACGAGTTTATAGTTTTAGCTACCGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTAGTCGACATTGTGGCATCGACCCCAGCTCGTTCTGCAGCTCAATCATTGGTTGAGTCTGCAACTAAAGCATGGAGGCGCAAGTTTCCTTTTTCCAACATTGACGACTGTGCTGTTGTGTGCCTCTTCCTCGACTCGAACTTGATGGTATCAGATATGAATGTTAAATCCGAGGAGGTTAGTTCAGCAGTTCAAGCTGAGACAGCCATGGTGGATGATGATGTCTCAGGCGCAGCTGGTCTACGGTGTTCGGAAATCGTGCAAACAGTAGGAGTTTCTACAAGAACGGTATGA | 2967 | 45.84 | MRKLGVLVLFWSASILLWNRTRWLTEAAPAGSAVTHLPGFTASDFPSKHHSGYINIDGGSSGKRLFYYFVTSQRSPAADPVVLWLNGGPGCSSFDGFVYEHGPFNFGEGNPKGTLPTLHLNPYSWSKVSNIIYLDSPAGVGLSYSPNEANYITGDLQTASDTHIFILRWFEEFPEFLQNPFYIAGESFAGIYVPTLASQVVQGLKNGAVPIINFKGYMVGNGVTDEKFDGNALVPFAHGMALISDAMFQEAEASCGGNYYDPQTEACFDKLDRVDQDLERLNVYDILEPCFHIGNTSQSLPTSFQQLGQTEKPLAIRKRMFGRAWPFRAPVRDGIVPLWSELAETDTKSHVPCLNDEVATIWLNDESVREAIHAEPESVAGPWELCTHRIRYSHNAGSMIPYHKNLTSQGFRALIFSGDHDMCVPYTGSQAWTSSLGYKIIDEWRPWFSNAQVAGYLQEYEHNLTFLTIKGAGHTVPEYKPREALDFYTRCQNSFTTRERILHRLLACLLNLPVVFPTQSFHPPFGRLQIRSRCLKRNSFCQILNSSPILFPTIGVPISRMGPCLSVVCKRAMAGSSVSSVLKASKLKDSENGLESKDSMFEQQSEEATVHRIPGRMFLNGSSEVASLYTQQGKKGMNQDAMIVWEHFGSRTDTFFCGVFDGHGPNGHLVAKRVRDSLPLKLTAHWEANASNEDISKEFGHKTGLNNENSGLETDWKEASSPLKHHEISENMKESFLKAFKIMDVELKMQPNIDCFCSGTTAVALVKQDRDLVIGNVGDSRAVLGTRDKDNCLQAVQLTIDLKPDIPAEAERILQCKGRVFAHEDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDEDEFIVLATDGIWDVLSNKEVVDIVASTPARSAAQSLVESATKAWRRKFPFSNIDDCAVVCLFLDSNLMVSDMNVKSEEVSSAVQAETAMVDDDVSGAAGLRCSEIVQTVGVSTRTV | 988 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4884425 | 4892999 | + | CmaCh11G009300.1 | Cma11g00930 | 303439 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g00930 | 988 | MobiDBLite | consensus disorder prediction | 698 | 718 | - | - | |
Cma11g00930 | 988 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 24 | 491 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | SUPERFAMILY | PP2C-like | 623 | 936 | IPR036457 | - | |
Cma11g00930 | 988 | Gene3D | - | 349 | 495 | - | - | |
Cma11g00930 | 988 | CDD | PP2Cc | 625 | 935 | IPR001932 | - | |
Cma11g00930 | 988 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 134 | 144 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 464 | 477 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 121 | 133 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 169 | 194 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | MobiDBLite | consensus disorder prediction | 702 | 716 | - | - | |
Cma11g00930 | 988 | Pfam | Serine carboxypeptidase | 38 | 490 | IPR001563 | GO:0004185|GO:0006508 | |
Cma11g00930 | 988 | SUPERFAMILY | alpha/beta-Hydrolases | 36 | 491 | IPR029058 | - | |
Cma11g00930 | 988 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 464 | 481 | IPR033124 | GO:0004185 | |
Cma11g00930 | 988 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 20 | 24 | 491 | - | - | |
Cma11g00930 | 988 | Pfam | Protein phosphatase 2C | 683 | 910 | IPR001932 | - | |
Cma11g00930 | 988 | Gene3D | alpha/beta hydrolase | 27 | 320 | IPR029058 | - | |
Cma11g00930 | 988 | ProSiteProfiles | PPM-type phosphatase domain profile. | 625 | 935 | IPR001932 | - | |
Cma11g00930 | 988 | Gene3D | - | 621 | 937 | IPR036457 | - | |
Cma11g00930 | 988 | SMART | PP2C_4 | 617 | 933 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00869 | Cma-Chr5:6071902 | Cma11g00930 | Cma-Chr11:4884425 | 1.21E-166 | dispersed | |
Cma09g00299 | Cma-Chr9:1226342 | Cma11g00930 | Cma-Chr11:4884425 | 5.19E-48 | dispersed | |
Cma11g00930 | Cma-Chr11:4884425 | Cma17g01330 | Cma-Chr17:8956352 | 0 | dispersed | |
Cma11g00930 | Cma-Chr11:4884425 | Cma01g00483 | Cma-Chr1:2450184 | 8.75E-165 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g00930 | K16296 | - | cmax:111498595 | 849.351 |