Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01064 ATGGAGATTCTGAAGGTTTGCTTCATTCTCCTCTCGACGGCGTCGTTTTTGTGGCTATCAGAATCAGTTACTCTCACGTCGGATTACTACCAGAAATCATGCCCGGAATTCCGCCAGATTATCCAACAAACAGTCACCAACAAGCAGATCACAAGCCCTTCCACCGCCGCTGGAACTCTCCGACTCCTCCTCCACGACTGTCTCCCCAACGGCTGCGACGGCTCTGTCCTCGTCTCCTCCACTCCATTCAACAAAGCTGAGCGCGACGCCGACATCAACCTCTCTCTCCCTGGCGATGCCTTCGATGTTGTCGTTCGGGCTAAGACCGCACTTGAGCTTGCATGTCCCGACACTGTCTCCTGTGCTGACATTCTTGCGGTTGCCACTCGTGACCTCGTCACCATGGTCGGTGGACCTTACTACAACGTTCTCCTCGGTCGCCGAGATGGCCGTGTCTCGGAAGCTTCGACGATTCCTAATGCTCTGCCGCTGGCTACATCGCCGATGTCTGAGATCATTGATATTTTCACATCTCGCGGGTTTACTTTGCAGGAAATGGTAGCGTTGTCTGGTGCTCATACGATTGGCTTCTCGCATTGCAAGGAATTCAGCGCTCAGATCTATAATTATAGCAAGTCGCCTCCGTATGACAGTCAGTATAACCCTAGATTTGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGAAAATAATCCTACATTATCCGTTTTCAACGACATTATGACTCCCAACAAGTTCGATAACTCTTACTTCCAGATACTACCTAAGGGATTGGGGATCTTGAAGTCCGATCATGGATTGTATAACGATTGGAGGACAAGGCCGTTCGTGGAGGCGTATGCGGCGGATGAGAACAAATTCTTCAGTGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATGAAGTTATAACAGGGAACCAAGGGGAGATTCGGCATCGATGCGATGCGATTAATTGA 981 49.85 MEILKVCFILLSTASFLWLSESVTLTSDYYQKSCPEFRQIIQQTVTNKQITSPSTAAGTLRLLLHDCLPNGCDGSVLVSSTPFNKAERDADINLSLPGDAFDVVVRAKTALELACPDTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSEASTIPNALPLATSPMSEIIDIFTSRGFTLQEMVALSGAHTIGFSHCKEFSAQIYNYSKSPPYDSQYNPRFAQGLQKACSGFENNPTLSVFNDIMTPNKFDNSYFQILPKGLGILKSDHGLYNDWRTRPFVEAYAADENKFFSDFARAMEKLSNYEVITGNQGEIRHRCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5836905 5837885 - CmaCh11G010640.1 Cma11g01064 303573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01064 326 Gene3D - 28 326 - -
Cma11g01064 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 Gene3D Peroxidase, domain 2 163 305 - -
Cma11g01064 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Cma11g01064 326 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 Pfam Peroxidase 42 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma11g01064 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cma11g01064 326 PANTHER PEROXIDASE 31 6 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01064 Cma-Chr11:5836905 Cma18g00148 Cma-Chr18:760016 1.32E-138 dispersed
Cma11g01064 Cma-Chr11:5836905 Cma14g00629 Cma-Chr14:3113042 0 wgd
Cma11g01064 Cma-Chr11:5836905 Cma04g02725 Cma-Chr4:18364076 2.71E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01064 K00430 - csv:101219829 583.948