Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01080 ATGGAGTCTTTGAATTCTTCCTCTTTCTTCTTCTTCTTCCTCGTTTCTCTGCTGTTCTTCCTTGCTTTCCTATGGAGATTACGCCGTAAACTCCCTTATCCCCCCGGCCCTACCGGCCTCCCTATCATCGGCAACATGCTCATGATGAACCAACTCACTCACCGTGGCCTCACTCGTCTCGCCGCCATCTACGGCGGTCTTTTCCACCTCCGTCTCGGCGTTCTCCATATGGTTGTCGTTTCCACGCCAGAAATGGCACGCGAGTTCCTCCAAGTTCAGGATATCGCATTCGCAAATAGACCTGCGAACGTCGCGATATCGTACCTCACGTACGACCGCGCCGATATGGCCTTCGCAAATTATGGCCCATTCTGGCGCCAAATGCGCAAGATCTGTGTCATGAAGCTTTTCAGTCGACGGCGGGCTGAATCATGGGCGTCAGTGCGTGATGAAGTCGATTCTGTACTTCAAATCGTATCGAATAAAATCGGCGAGCCTGTGAATATAGGCGAACTCGTTTTCGGTCTGACACGAAACATAACCTACAAGGCCGCGTTCGGATCGTGCTCGCACGAAGGACAAGACGAATTCGTGGAAATCCTGCAAGAATTTTCTAAACTGTTTGGCGCTTTTAACATTGCAGATTTTTTGCCATGGTTAGGCTGGATTCATGCTGGAGAATTCAATCGAAGAATGGAAAAAGCTAGAAAAGCTCTTGATGTGTTTATTGATAGCATAATCGATGAACATATAGCAAAAAAATTGGGGAAAAACGATGATAATGATGAACAGGACGTTGATTCCGATATGGTGGATGAATTAATGGCATTCCTCGTCGATGAATCGAGTAGCAATGATTTTCAACTTACTAGAGATAATATCAAAGCGATAATCATGGATGTGATGTTTGGCGGAACAGAGACGGTTGCTTCTGTGATTGAATGGTCCATTGCGGAATTAATGAGAAATCCGGAAGAGTTACAAAAGCTTCAAGAAGAACTCACACGGACTGTTGGATTAGATCGAAAACTCCATGAATCGGACCTTCAAAATCTGCCCTACCTGAAAGCCGTCGTGAAGGAGACGCTACGCCTTCATCCGCCGATTCCGTTGCTCCTCCACGAGACCGCCGTGGACACCGCCGTTGCAGGCTACTTAATTCCGACTGGTTCAAGAGTGTGGATCAACTGCTGGGCTATTGGCCGGGATGGAACCGCTTGGGAAGATCCGGACCGGTTTCGACCAGGGAGATTTGAAAACGACGCCGCTCCGGATTTCAAAGGGAGTGATTTTGAGTTCCTTCCGTTCGGGTCGGGTCGGCGGTCTTGCCCCGGAATGCAACTCGGACTTTATGCTTGTGAGATGGCGGTGGCTAATCTTCTTCATTCCTTCTCGTGGGAGTTGCCGGACGGAATGAAGGCGGAGGAGCTGGACATGAACGACTCGTTCGGTCTAACCGCTCCCAGAGCGGTTCGACTCGTTGCTGTGCCGAGTTACCGACTTAACTCGGCCGGGTTCAATTAA 1524 49.28 MESLNSSSFFFFFLVSLLFFLAFLWRLRRKLPYPPGPTGLPIIGNMLMMNQLTHRGLTRLAAIYGGLFHLRLGVLHMVVVSTPEMAREFLQVQDIAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRRRAESWASVRDEVDSVLQIVSNKIGEPVNIGELVFGLTRNITYKAAFGSCSHEGQDEFVEILQEFSKLFGAFNIADFLPWLGWIHAGEFNRRMEKARKALDVFIDSIIDEHIAKKLGKNDDNDEQDVDSDMVDELMAFLVDESSSNDFQLTRDNIKAIIMDVMFGGTETVASVIEWSIAELMRNPEELQKLQEELTRTVGLDRKLHESDLQNLPYLKAVVKETLRLHPPIPLLLHETAVDTAVAGYLIPTGSRVWINCWAIGRDGTAWEDPDRFRPGRFENDAAPDFKGSDFEFLPFGSGRRSCPGMQLGLYACEMAVANLLHSFSWELPDGMKAEELDMNDSFGLTAPRAVRLVAVPSYRLNSAGFN 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5919489 5921089 + CmaCh11G010800.1 Cma11g01080 303589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01080 507 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PANTHER CYTOCHROME P450 84A1-RELATED 7 503 - -
Cma11g01080 507 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 7 503 - -
Cma11g01080 507 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cma11g01080 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01080 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00445 Cma-Chr7:1948968 Cma11g01080 Cma-Chr11:5919489 0 dispersed
Cma09g00342 Cma-Chr9:1407434 Cma11g01080 Cma-Chr11:5919489 6.68E-37 dispersed
Cma11g01080 Cma-Chr11:5919489 Cma03g00779 Cma-Chr3:6056027 5.82E-126 dispersed
Cma15g01161 Cma-Chr15:7359367 Cma11g01080 Cma-Chr11:5919489 5.89E-83 dispersed
Cma11g01080 Cma-Chr11:5919489 Cma01g00029 Cma-Chr1:123363 1.89E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01080 K09755 - csv:101217850 820.846