Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01134 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTGATTGCTAATTCACTGTTGAATGCAGCAGAGAGCTTCAATGTAGAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATAGACCTTTAATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAATCAAAGCCCATCAGATCTGTCGCCTTCGCCGTCTCCATCACCGGACGAGGCAGCTCGTCCAGTGCACACTCATAAACATTCCCGCCCTCATCAGCTTCGCTTGCACAATAGCCGACCAGTCTACAAATCTAAAAGACATGAAGATGCAAGAAAAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTACAGGAATCACCATTTTGATATGCACTATTGTTGCCTTCTGGGTCTGCAAGAAGTTTAAAATTCGAACAGAGGAACCCGCAGAGAAGCTTTCTATAACGAGTGAAACAGGAGAGAAGACAGCCAAACAAAAATCTGGGTTTGATCTGTTCGATCTCAGTACGCATGGAATGGATGTTGAAGAACACAGTGTTTCCTCATCTGGGGAGAGAGTTACTCCTGTTAAATCTTGTTCGTCTGATGAGGAGGAATCGTTCCATTCTTGTGGGGATCCCAATTTGTCGAATGTTCGTCTTTCAAATGCTTCTGAATCTTCTTCAGCTAATGTGAAAACAAATTCTAATTCTTCAGAACCTAACAAACCATTAACTTCTGACCAGTTGCATCTGACCAGTTCTCCATGTAATTCAGAAACCAAGGATGTCCCATCTCTAGCTCCGCCTCCACCACCGCCGCCGCCGCCGCCGCTGCGACCATCTCCGGTTACTTATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCCACCTCTTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTACGTTATCTCAAATACCGTGGAATGATCTGCCATCACCTCCAAACATTGCTAAACCTTCACTACCATCATCTACTATTCCTCCACCCCCTTGTCCACCGCCAAGTTTGAAAGAAAACGCTTGTTCTTTCAAAGCCCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCGTGGCATTTGGAAAAGAGGGAAATCTGCTGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTCGGCTACAACCAATATGGTTCAATGAAGAATGGTGATGCTAGCAACAAAACCCCTTCTCCAAGCAAGCATGTACTAGAGGCTAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCCGCAGAACAAGCTTGTGAAGCCATAGAACAAGGGACGGGGTTGCGTTTAAGACAACTTGAAGCACTGGTAAAGATGGTACCAACACAGGAAGAACAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATATGGGTGCACAGAGAAGTTTGTGATAGCAATTCTGAGAATACCATTCGCCTTCCAACGAGTGGAAGCCATGCTCTACAGAGAAACTTTTGAAGATGAAGTAAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCTTGCAAGGAACTAAGATCCAGCAGGCTTTTCCTGAAACTACTTGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTGGGAACAAGCAGAGGAGGCGCAAAAGCATTCAAACTAGACGCACTCCTAAGACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTCCTCCATTTCGTGGTCCAAGAAATAATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGATCTGGTCTCAGGCTTGAGCACCGAATTACACAACGTTAAGCGAGCGGCGACGACCGATCTGAAAGTTCTGGCGAGCGCCACAGCGAATCTGAACGAGGGAATGGCGAAATTGCAAGAACTGGTGTTGAAGGAACTGTGTGGAGATGAAGGGAGTGGGAACTTCGTGAGCGCGATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGTTGGTGAGGAAGGACGAGGAAGGGGTGATGGGGAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAAAGCTTCAAGATCGGAAGTTGA 2349 45.64 MGCVVKCVFMIVIANSLLNAAESFNVEELERVSGEDESGGNRPLILERFRALLGLNQSPSDLSPSPSPSPDEAARPVHTHKHSRPHQLRLHNSRPVYKSKRHEDARKRVRKILVAVLVSTGITILICTIVAFWVCKKFKIRTEEPAEKLSITSETGEKTAKQKSGFDLFDLSTHGMDVEEHSVSSSGERVTPVKSCSSDEEESFHSCGDPNLSNVRLSNASESSSANVKTNSNSSEPNKPLTSDQLHLTSSPCNSETKDVPSLAPPPPPPPPPPLRPSPVTYRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSTLSQIPWNDLPSPPNIAKPSLPSSTIPPPPCPPPSLKENACSFKAPPPPPSKLPQFVAFGKEGNLLPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQYGSMKNGDASNKTPSPSKHVLEAKRLQNLTILLKALNLSAEQACEAIEQGTGLRLRQLEALVKMVPTQEEQAKLLSYEGDIGEYGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGAKAFKLDALLRLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATTDLKVLASATANLNEGMAKLQELVLKELCGDEGSGNFVSAMKGFLSYVKKTMELVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6466353 6469619 - CmaCh11G011340.1 Cma11g01134 303643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01134 782 PANTHER FORMIN-LIKE PROTEIN 60 779 - -
Cma11g01134 782 MobiDBLite consensus disorder prediction 58 102 - -
Cma11g01134 782 ProSiteProfiles Formin homology-2 (FH2) domain profile. 373 782 IPR015425 -
Cma11g01134 782 PANTHER FORMIN-RELATED 60 779 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma11g01134 782 MobiDBLite consensus disorder prediction 261 279 - -
Cma11g01134 782 MobiDBLite consensus disorder prediction 280 324 - -
Cma11g01134 782 MobiDBLite consensus disorder prediction 178 349 - -
Cma11g01134 782 MobiDBLite consensus disorder prediction 207 258 - -
Cma11g01134 782 SUPERFAMILY Formin homology 2 domain (FH2 domain) 386 776 - -
Cma11g01134 782 Pfam Formin Homology 2 Domain 381 771 IPR015425 -
Cma11g01134 782 SMART it6_source 373 780 IPR015425 -
Cma11g01134 782 Coils Coil 534 554 - -
Cma11g01134 782 MobiDBLite consensus disorder prediction 326 349 - -
Cma11g01134 782 Gene3D Formin, FH2 domain 395 780 IPR042201 -
Cma11g01134 782 MobiDBLite consensus disorder prediction 79 96 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g01113 Cma11g01134 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01134 Cma-Chr11:6466353 Cma19g00185 Cma-Chr19:1217972 1.38E-116 dispersed
Cma10g01113 Cma-Chr10:7607891 Cma11g01134 Cma-Chr11:6466353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01134 - - cmos:111441137 1389.79