Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01134 | ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTGATTGCTAATTCACTGTTGAATGCAGCAGAGAGCTTCAATGTAGAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATAGACCTTTAATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAATCAAAGCCCATCAGATCTGTCGCCTTCGCCGTCTCCATCACCGGACGAGGCAGCTCGTCCAGTGCACACTCATAAACATTCCCGCCCTCATCAGCTTCGCTTGCACAATAGCCGACCAGTCTACAAATCTAAAAGACATGAAGATGCAAGAAAAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTACAGGAATCACCATTTTGATATGCACTATTGTTGCCTTCTGGGTCTGCAAGAAGTTTAAAATTCGAACAGAGGAACCCGCAGAGAAGCTTTCTATAACGAGTGAAACAGGAGAGAAGACAGCCAAACAAAAATCTGGGTTTGATCTGTTCGATCTCAGTACGCATGGAATGGATGTTGAAGAACACAGTGTTTCCTCATCTGGGGAGAGAGTTACTCCTGTTAAATCTTGTTCGTCTGATGAGGAGGAATCGTTCCATTCTTGTGGGGATCCCAATTTGTCGAATGTTCGTCTTTCAAATGCTTCTGAATCTTCTTCAGCTAATGTGAAAACAAATTCTAATTCTTCAGAACCTAACAAACCATTAACTTCTGACCAGTTGCATCTGACCAGTTCTCCATGTAATTCAGAAACCAAGGATGTCCCATCTCTAGCTCCGCCTCCACCACCGCCGCCGCCGCCGCCGCTGCGACCATCTCCGGTTACTTATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCCACCTCTTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTACGTTATCTCAAATACCGTGGAATGATCTGCCATCACCTCCAAACATTGCTAAACCTTCACTACCATCATCTACTATTCCTCCACCCCCTTGTCCACCGCCAAGTTTGAAAGAAAACGCTTGTTCTTTCAAAGCCCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCGTGGCATTTGGAAAAGAGGGAAATCTGCTGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTCGGCTACAACCAATATGGTTCAATGAAGAATGGTGATGCTAGCAACAAAACCCCTTCTCCAAGCAAGCATGTACTAGAGGCTAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCCGCAGAACAAGCTTGTGAAGCCATAGAACAAGGGACGGGGTTGCGTTTAAGACAACTTGAAGCACTGGTAAAGATGGTACCAACACAGGAAGAACAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATATGGGTGCACAGAGAAGTTTGTGATAGCAATTCTGAGAATACCATTCGCCTTCCAACGAGTGGAAGCCATGCTCTACAGAGAAACTTTTGAAGATGAAGTAAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCTTGCAAGGAACTAAGATCCAGCAGGCTTTTCCTGAAACTACTTGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTGGGAACAAGCAGAGGAGGCGCAAAAGCATTCAAACTAGACGCACTCCTAAGACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTCCTCCATTTCGTGGTCCAAGAAATAATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGATCTGGTCTCAGGCTTGAGCACCGAATTACACAACGTTAAGCGAGCGGCGACGACCGATCTGAAAGTTCTGGCGAGCGCCACAGCGAATCTGAACGAGGGAATGGCGAAATTGCAAGAACTGGTGTTGAAGGAACTGTGTGGAGATGAAGGGAGTGGGAACTTCGTGAGCGCGATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGTTGGTGAGGAAGGACGAGGAAGGGGTGATGGGGAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAAAGCTTCAAGATCGGAAGTTGA | 2349 | 45.64 | MGCVVKCVFMIVIANSLLNAAESFNVEELERVSGEDESGGNRPLILERFRALLGLNQSPSDLSPSPSPSPDEAARPVHTHKHSRPHQLRLHNSRPVYKSKRHEDARKRVRKILVAVLVSTGITILICTIVAFWVCKKFKIRTEEPAEKLSITSETGEKTAKQKSGFDLFDLSTHGMDVEEHSVSSSGERVTPVKSCSSDEEESFHSCGDPNLSNVRLSNASESSSANVKTNSNSSEPNKPLTSDQLHLTSSPCNSETKDVPSLAPPPPPPPPPPLRPSPVTYRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSTLSQIPWNDLPSPPNIAKPSLPSSTIPPPPCPPPSLKENACSFKAPPPPPSKLPQFVAFGKEGNLLPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQYGSMKNGDASNKTPSPSKHVLEAKRLQNLTILLKALNLSAEQACEAIEQGTGLRLRQLEALVKMVPTQEEQAKLLSYEGDIGEYGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGAKAFKLDALLRLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATTDLKVLASATANLNEGMAKLQELVLKELCGDEGSGNFVSAMKGFLSYVKKTMELVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS | 782 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6466353 | 6469619 | - | CmaCh11G011340.1 | Cma11g01134 | 303643 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01134 | 782 | PANTHER | FORMIN-LIKE PROTEIN | 60 | 779 | - | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 58 | 102 | - | - | |
Cma11g01134 | 782 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 373 | 782 | IPR015425 | - | |
Cma11g01134 | 782 | PANTHER | FORMIN-RELATED | 60 | 779 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 261 | 279 | - | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 280 | 324 | - | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 178 | 349 | - | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 207 | 258 | - | - | |
Cma11g01134 | 782 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 386 | 776 | - | - | |
Cma11g01134 | 782 | Pfam | Formin Homology 2 Domain | 381 | 771 | IPR015425 | - | |
Cma11g01134 | 782 | SMART | it6_source | 373 | 780 | IPR015425 | - | |
Cma11g01134 | 782 | Coils | Coil | 534 | 554 | - | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 326 | 349 | - | - | |
Cma11g01134 | 782 | Gene3D | Formin, FH2 domain | 395 | 780 | IPR042201 | - | |
Cma11g01134 | 782 | MobiDBLite | consensus disorder prediction | 79 | 96 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g01113 | Cma11g01134 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01134 | Cma-Chr11:6466353 | Cma19g00185 | Cma-Chr19:1217972 | 1.38E-116 | dispersed | |
Cma10g01113 | Cma-Chr10:7607891 | Cma11g01134 | Cma-Chr11:6466353 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01134 | - | - | cmos:111441137 | 1389.79 |