Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01151 ATGGCGACCTCCAAATCCCAAAGGTCTCCTGAGGAGGTGGAAGGCATTATCCTTCGCAAAGTTTTCCTTGTCTCTCTCACCCCTCCTTCCGATTCCGATTCCGATTCTCGCACCGTCTATCTCGAGCAAACCGCCGCCGAACTCCTTAGCGAAGGCAAGCAATTGAGGATTTCGAGGGATGTAATGGAGCGTATTATAATTGATCGTCTATCCGGTAATTTCCTCTCTGCCGAACCTATTTTTCAGTACCTAATCGGCTGCTATCGTCGGGCTCACGACGAGACTAAGAAAATTGCCTCCATGAAGGATAGGAATTTGCGGTCTGAGATTGAGATGGCGCTCAAACAAGCCAAGAAGTTGACGGTTTCCTATTGTAGGATTCATTTGGGGAATCCTGAATTGTTTTCGGGTGGGGATTTGGGTACTAACTCCACTACTTCGCCTTTGCTTCCTTTGATTTTCTCTGAAGTTGGTAGCTCCATGGATGGATTTGGGGCTAGTACCAGTGTTGGTGGAGCTCTTCAGTGCCCTCCGGGTTTCATGGACGAGTTTTTCCGGGATTCGGATTTTGATACATTAGACCCCATATTGAGGGGGTTGTACGAGGATTTGAGGGGTACCGTCCTTAAAGTTTCGGCTCTTGGGAACTTCCAGCAGCCCTTAAGGGCACTTAGGTTTCTTGTTAGTTTTCCCATTGGGGCTAAATCTTTGGTTAATCATCCATGGTGGATTCCCCCTGGTAAATATTCCAATGGCCGTGTCATTGAGAGGACAAGTATTTTGGGGCCTTTCTTCCATGTCAGTGCTCTGCCCGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGGCAGCAATGCTTTTCAGAAGCATCAACTCGTAGACCATCTGATTTACTGTCTTCATTCACTACAATTAAAACAGTCATGAATAACTTATATGATGGTCTTGCGGAAGTTCTTCTCTCTCTTCTTAAGAACACGGAGACCCGTGAAAATGTTCTTGAGTATCTTGCAGAAGTGATAAATAGAAACTCATCAAGGGCTCATATACAGGTTGATCCTCTCTCCTGTGCAAGTTCAGGCATGTTTGTTAATCTCAGTGCCATCATGCTTCGTCTTTGTGAGCCATTTCTAGATGCAAACTTGACCAAAAGGGATAAAATTGATCCGAAATATGTATGTTATGGTAACCGCTTGGAGTTAAGAGGATTAACTGCTCTACATGCATCGTCTGAAGAAGTTACAGACTGGATTAATAATGGTACTCAGTTGAAAACTGATAACTCCGGGCAGTTCAATGACAGTGAAAGTCGCTTGCTGCAATCCCAAGAAGCTTCTAGTTCTGGCAGTAATGCTACAATTGAATCTTCTACTGCAAAGGCAAGATTGAATAGTGAGAAGACTAGGTACCCTTTCATATGTGAGTGTTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCGGACTTCAAGCATTTAGTACAGGATATATCTAGGTGTGAAGATACATTGGCCACACTCAAAGCCATGCAAGGACAAGGACCTGCTCCACAGCTTGAAATGGATGTAGCTCGCCTTGAGAAGGAAATAGAGTTGTACTCACAGGAAAAGCTTTGTTTTGAAGCTCAAATACTGAGGGACGGGAGTCTAATCCAGCAAGCTCTTACTTTCTATCGATTAATGGTCGTATGGTTAGTTGGTTTGATTGGTGGATTTAAAATGCCTCTTCCATCAAGTTGCCCGATGGAATTTGCATCCATGACAGAGCATTTTGTGGAAGATGCAATGGAATTGCTTATATTTGCTTCCCGAATTCCAAAAGCTTTGGACGGTATCAATTTGGATGATTTTATGAACTTCATCATTATGTTTATGGCAAGTCCGGAATATATTAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTCAACTGCTGGATTCCTCGTAGAAGTGGTTCATCTGTAACAGCAACATTATTTGAAGGCCACCAACTATCACTCGAGTATCTTGTTAGGAATCTCTTAAAGCTTTATGTGGACATTGAGTTCACTGGTTCACATACACAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCCGAACTTCTTGAATACCTTTGGCAGGTTCCTAGTCATCGTAATGCTTGGAGAATGATTGCCAAGGAAGAGGAGAAGGGTGTTTACTTGAATTTCTTGAACTTCCTAATCAATGATAGCATATATCTTCTTGATGAAAGCCTTAATAAGATTCTCGAACTTAAAGAGCTTGAAGCTGAAATGTCAAATACTGCAGAATGGGAGCAGCGACCTGCTCAAGAGAGGCAGGAGAGAACTAGGCTATTTCACTCCCAAGAAAATATCATCCGGATTGACATGAAATTAGCAAATGAGGATGTGAGTATGCTGGCATTTACAACAGAGCAAATCACAGCTCCTTTCCTACTTCCAGAGATGGTCGAACGGGTGGCCAGCATGCTTAATTATTTCCTCCTGCAACTTGTTGGTCCTCAGCGAAGATCTCTTAGTCTGAAAGACCCTGAAAAGTACGAATTCCGTCCAAGAGAGTTGCTTAAGCAGATTGTTCACATATATGTTCATCTGGCGAGAGGCGATAAGGAGAATATTTTCCCAGCTGCCATTTCGAAGGACGGCAGATCATATAACGAGCAGTTGTTCAATGCTGCAGCAGTTGTACTTAGACGAATTGGAGAAGATGGTAGGATAATACAGGAATTTATTGCTCTTGGTAACAAGGCGAAGGATGCAGCTTCAGAGGCCATGGATGCTGAGGCTACTCTAGGAGATATACCGGATGAATTCCTTGACCCGATCCAATATACTTTAATGAAGGATCCTGTGATCTTACCTTCTTCAAGGATCACGGTCGACAGACCCGTCATTCAAAGACATCTCCTTAGCGATAGCACCGACCCGTTCAACCGGTCTCATCTGACTTCGGACATGCTAATACCAAACGAAGAACTGAAAGCAAGGATCAAAGAGTTCATCATGTCAAAAAAATTGAAGAGGCAACCGGACGGAGGGGTTGCGATGCAGAGTAGCAAGGCGACGATCCAACCCACAAGCGGAGAAATGTTGATCGATTAA 3129 43.3 MATSKSQRSPEEVEGIILRKVFLVSLTPPSDSDSDSRTVYLEQTAAELLSEGKQLRISRDVMERIIIDRLSGNFLSAEPIFQYLIGCYRRAHDETKKIASMKDRNLRSEIEMALKQAKKLTVSYCRIHLGNPELFSGGDLGTNSTTSPLLPLIFSEVGSSMDGFGASTSVGGALQCPPGFMDEFFRDSDFDTLDPILRGLYEDLRGTVLKVSALGNFQQPLRALRFLVSFPIGAKSLVNHPWWIPPGKYSNGRVIERTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPSDLLSSFTTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTDWINNGTQLKTDNSGQFNDSESRLLQSQEASSSGSNATIESSTAKARLNSEKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQGPAPQLEMDVARLEKEIELYSQEKLCFEAQILRDGSLIQQALTFYRLMVVWLVGLIGGFKMPLPSSCPMEFASMTEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPRELLKQIVHIYVHLARGDKENIFPAAISKDGRSYNEQLFNAAAVVLRRIGEDGRIIQEFIALGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTSDMLIPNEELKARIKEFIMSKKLKRQPDGGVAMQSSKATIQPTSGEMLID 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6634185 6641073 - CmaCh11G011510.1 Cma11g01151 303660

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01151 1042 Coils Coil 521 548 - -
Cma11g01151 1042 PANTHER - 1 1017 - -
Cma11g01151 1042 PANTHER UBIQUITINATION FACTOR E4 1 1017 IPR045132 GO:0000151|GO:0030433|GO:0034450
Cma11g01151 1042 SUPERFAMILY RING/U-box 935 1016 - -
Cma11g01151 1042 CDD RING-Ubox_UBE4A 945 1014 - -
Cma11g01151 1042 Pfam Ubiquitin elongating factor core 261 926 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Cma11g01151 1042 MobiDBLite consensus disorder prediction 425 460 - -
Cma11g01151 1042 ProSiteProfiles U-box domain profile. 942 1016 IPR003613 GO:0004842|GO:0016567
Cma11g01151 1042 MobiDBLite consensus disorder prediction 1020 1042 - -
Cma11g01151 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 942 1020 IPR013083 -
Cma11g01151 1042 SMART Ubox_2 946 1009 IPR003613 GO:0004842|GO:0016567
Cma11g01151 1042 Pfam U-box domain 943 1014 IPR003613 GO:0004842|GO:0016567
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01151 K10597 UBE4B, UFD2; ubiquitin conjugation factor E4 B [EC:2.3.2.27] - csv:101211398 1898.25
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01151 Cma-Chr11:6634185 Cma14g00569 Cma-Chr14:2842867 0 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma14g00569 . 1 1040 U-box Gene Family AT5G15400 76.6 0.0e+00 1586.2
Cma11g01151 . 1 1042 U-box Gene Family AT5G15400 75.5 0.0e+00 1557.7
Cma02g00507 CCT,CST 1 814 U-box Gene Family AT5G67340 50.6 6.2e-120 429.1
Cma08g00287 . 20 776 U-box Gene Family AT3G54790 51.3 5.4e-130 462.6
Cma20g00982 CCT,CST 251 884 U-box Gene Family AT2G23140 64.0 1.9e-115 414.1
Cma02g00507 CCT,CST 197 814 U-box Gene Family AT2G23140 64.1 1.9e-112 404.1
Cma05g00083 . 1 770 U-box Gene Family AT1G24330 58.8 5.0e-240 828.2
Cma12g00066 . 1 797 U-box Gene Family AT1G24330 56.2 1.7e-235 813.1
Cma18g00710 CCT 1 760 U-box Gene Family AT1G24330 58.1 6.5e-232 801.2
Cma04g01823 CCT 1 761 U-box Gene Family AT1G24330 56.9 1.1e-226 783.9
Cma05g00083 . 1 769 U-box Gene Family AT1G67530 59.2 2.6e-236 815.8
Cma12g00066 . 1 713 U-box Gene Family AT1G67530 61.3 1.6e-233 806.6
Cma18g00710 CCT 1 760 U-box Gene Family AT1G67530 57.5 3.2e-226 782.3
Cma04g01823 CCT 1 761 U-box Gene Family AT1G67530 56.7 9.6e-223 770.8
Cma07g00289 . 1 362 U-box Gene Family AT4G21350 62.9 1.0e-121 434.1
Cma03g00505 . 1 362 U-box Gene Family AT4G21350 62.9 6.6e-121 431.4
Cma19g00177 . 164 488 U-box Gene Family AT3G07360 56.4 3.4e-81 299.3
Cma02g01665 . 182 503 U-box Gene Family AT3G07360 56.0 9.9e-81 297.7
Cma04g00054 . 271 466 U-box Gene Family AT1G71020 67.7 3.3e-72 270.0
Cma04g00997 CCT 242 443 U-box Gene Family AT1G71020 66.0 2.1e-71 267.3
Cma15g00946 CCT 674 877 U-box Gene Family AT1G71020 54.4 1.3e-52 204.9
Cma18g00906 CST 235 438 U-box Gene Family AT1G71020 53.6 1.3e-49 194.9
Cma13g00132 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 4.3e-48 189.9
Cma01g00596 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 9.6e-48 188.7
Cma20g00410 CCT 254 424 U-box Gene Family AT1G71020 57.1 3.1e-46 183.7
Cma04g01383 CST 241 390 U-box Gene Family AT1G71020 53.9 7.3e-40 162.5
Cma04g00997 CCT 6 643 U-box Gene Family AT1G23030 56.7 6.1e-108 389.0
Cma04g00054 . 18 670 U-box Gene Family AT1G23030 54.5 4.9e-105 379.4
Cma01g00596 CCT,CST 93 638 U-box Gene Family AT2G28830 59.1 1.4e-101 367.9
Cma20g00410 CCT 93 634 U-box Gene Family AT2G28830 50.1 2.1e-97 354.0
Cma13g00132 CCT,CST 92 428 U-box Gene Family AT2G28830 56.8 4.8e-94 342.8
Cma01g00596 CCT,CST 1 662 U-box Gene Family AT3G46510 68.7 1.8e-169 593.6
Cma13g00132 CCT,CST 1 634 U-box Gene Family AT3G46510 68.6 4.0e-161 565.8
Cma20g00410 CCT 11 637 U-box Gene Family AT3G46510 66.3 6.3e-159 558.5
Cma18g00906 CST 30 645 U-box Gene Family AT3G46510 58.4 1.9e-123 440.7
Cma04g01383 CST 6 615 U-box Gene Family AT3G46510 53.3 3.5e-109 393.3
Cma18g00906 CST 22 647 U-box Gene Family AT3G54850 67.3 8.1e-164 574.7
Cma04g01383 CST 8 617 U-box Gene Family AT3G54850 61.4 2.0e-141 500.4
Cma20g00410 CCT 13 627 U-box Gene Family AT3G54850 56.4 8.5e-113 405.2
Cma01g00596 CCT,CST 8 641 U-box Gene Family AT3G54850 54.6 1.8e-102 370.9
Cma20g00717 . 97 650 U-box Gene Family AT5G42340 65.9 7.3e-123 438.7
Cma07g01227 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cma03g00299 CST 9 669 U-box Gene Family AT5G01830 56.8 4.1e-198 688.7
Cma18g00432 CST 44 750 U-box Gene Family AT1G29340 68.1 9.8e-246 847.0
Cma13g00582 CST 1 710 U-box Gene Family AT1G29340 67.1 6.6e-242 834.3
Cma01g00369 . 61 476 U-box Gene Family AT5G37490 50.1 5.2e-109 392.1
Cma06g00527 CCT 2 407 U-box Gene Family AT3G52450 54.3 1.8e-125 446.8
Cma03g00257 . 4 422 U-box Gene Family AT3G52450 53.8 1.2e-121 434.1
Cma07g01176 . 3 403 U-box Gene Family AT3G52450 52.1 3.8e-112 402.5
Cma06g00527 CCT 2 406 U-box Gene Family AT2G35930 56.0 2.8e-125 446.0
Cma03g00257 . 4 422 U-box Gene Family AT2G35930 52.0 4.0e-119 425.6
Cma07g01176 . 3 403 U-box Gene Family AT2G35930 53.6 3.3e-113 406.0
Cma04g00485 . 7 420 U-box Gene Family AT3G19380 64.8 9.3e-148 520.8
Cma04g00485 . 1 420 U-box Gene Family AT1G49780 65.3 5.6e-153 538.1
Cma03g01083 CST 1 411 U-box Gene Family AT5G64660 52.8 4.1e-119 425.6
Cma07g00789 CST 1 411 U-box Gene Family AT5G64660 53.3 3.4e-118 422.5
Cma07g00789 CST 1 411 U-box Gene Family AT5G09800 51.8 7.2e-105 378.3
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT3G49810 65.6 2.0e-164 576.2
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT3G49810 62.9 2.3e-152 536.2
Cma12g00605 CCT,CST 23 450 U-box Gene Family AT3G49810 62.6 9.9e-148 520.8
Cma05g00129 CCT,CST 1 452 U-box Gene Family AT3G49810 61.3 1.9e-146 516.5
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT5G65920 64.6 3.8e-160 562.0
Cma05g00129 CCT,CST 23 452 U-box Gene Family AT5G65920 65.3 6.8e-149 524.6
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT5G65920 61.7 5.8e-148 521.5
Cma12g00605 CCT,CST 1 450 U-box Gene Family AT5G65920 60.5 2.5e-143 506.1
Cma06g01069 CST 54 928 U-box Gene Family AT2G45910 50.2 1.7e-225 780.0
Cma14g02042 CST 1 868 U-box Gene Family AT2G45910 50.5 4.9e-217 751.9
Cma08g00785 . 372 644 U-box Gene Family AT2G45910 51.6 1.5e-77 288.5
Cma05g01403 CST 4 718 U-box Gene Family AT2G19410 50.6 3.6e-209 725.7
Cma15g01353 . 23 805 U-box Gene Family AT4G25160 53.8 3.9e-222 768.8
Cma02g00976 . 50 835 U-box Gene Family AT4G25160 51.4 7.1e-216 748.0
Cma15g00312 CST 815 1309 U-box Gene Family AT5G40140 57.2 2.4e-95 347.1
Cma04g02726 CST 57 545 U-box Gene Family AT5G40140 55.7 2.4e-87 320.5
Cma13g00905 . 29 490 U-box Gene Family AT5G40140 53.7 3.4e-57 220.3
Cma05g00970 . 4 861 U-box Gene Family AT1G76390 56.4 6.2e-257 884.4
Cma05g00970 . 13 859 U-box Gene Family AT1G20780 58.0 1.4e-269 926.4
Cma05g00083 . 1 771 U-box Gene Family AT1G27910 62.0 1.3e-264 909.8
Cma18g00710 CCT 1 769 U-box Gene Family AT1G27910 62.6 7.1e-263 904.0
Cma04g01823 CCT 1 770 U-box Gene Family AT1G27910 61.5 4.5e-257 884.8
Cma12g00066 . 1 805 U-box Gene Family AT1G27910 59.6 1.7e-256 882.9
Cma07g00649 CST 546 1137 U-box Gene Family AT5G67530 74.8 1.1e-263 906.4
Cma03g00917 . 1 594 U-box Gene Family AT5G67530 74.9 4.4e-260 894.4
Cma14g01990 . 3 157 U-box Gene Family AT5G67530 52.9 5.5e-45 179.9
Cma07g00578 . 71 859 U-box Gene Family AT5G65500 50.8 1.6e-209 726.9
Cma14g01841 CST 1 518 U-box Gene Family AT1G04510 74.7 1.5e-224 776.2
Cma06g01297 CST 1 521 U-box Gene Family AT1G04510 67.8 5.1e-204 708.0
Cma14g01841 CST 1 485 U-box Gene Family AT2G33340 73.3 7.1e-208 720.7
Cma06g01297 CST 1 490 U-box Gene Family AT2G33340 66.6 6.6e-190 661.0
Cma02g01666 . 11 279 U-box Gene Family AT3G07370 65.4 1.1e-99 360.5
Cma19g00176 . 10 278 U-box Gene Family AT3G07370 65.1 4.0e-99 358.6
Cma14g00569 . 1 1040 U-box Gene Family AT5G15400 76.6 0.0e+00 1586.2
Cma11g01151 . 1 1042 U-box Gene Family AT5G15400 75.5 0.0e+00 1557.7
Cma02g00507 CCT,CST 1 814 U-box Gene Family AT5G67340 50.6 6.2e-120 429.1
Cma08g00287 . 20 776 U-box Gene Family AT3G54790 51.3 5.4e-130 462.6
Cma20g00982 CCT,CST 251 884 U-box Gene Family AT2G23140 64.0 1.9e-115 414.1
Cma02g00507 CCT,CST 197 814 U-box Gene Family AT2G23140 64.1 1.9e-112 404.1
Cma05g00083 . 1 770 U-box Gene Family AT1G24330 58.8 5.0e-240 828.2
Cma12g00066 . 1 797 U-box Gene Family AT1G24330 56.2 1.7e-235 813.1
Cma18g00710 CCT 1 760 U-box Gene Family AT1G24330 58.1 6.5e-232 801.2
Cma04g01823 CCT 1 761 U-box Gene Family AT1G24330 56.9 1.1e-226 783.9
Cma05g00083 . 1 769 U-box Gene Family AT1G67530 59.2 2.6e-236 815.8
Cma12g00066 . 1 713 U-box Gene Family AT1G67530 61.3 1.6e-233 806.6
Cma18g00710 CCT 1 760 U-box Gene Family AT1G67530 57.5 3.2e-226 782.3
Cma04g01823 CCT 1 761 U-box Gene Family AT1G67530 56.7 9.6e-223 770.8
Cma07g00289 . 1 362 U-box Gene Family AT4G21350 62.9 1.0e-121 434.1
Cma03g00505 . 1 362 U-box Gene Family AT4G21350 62.9 6.6e-121 431.4
Cma19g00177 . 164 488 U-box Gene Family AT3G07360 56.4 3.4e-81 299.3
Cma02g01665 . 182 503 U-box Gene Family AT3G07360 56.0 9.9e-81 297.7
Cma04g00054 . 271 466 U-box Gene Family AT1G71020 67.7 3.3e-72 270.0
Cma04g00997 CCT 242 443 U-box Gene Family AT1G71020 66.0 2.1e-71 267.3
Cma15g00946 CCT 674 877 U-box Gene Family AT1G71020 54.4 1.3e-52 204.9
Cma18g00906 CST 235 438 U-box Gene Family AT1G71020 53.6 1.3e-49 194.9
Cma13g00132 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 4.3e-48 189.9
Cma01g00596 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 9.6e-48 188.7
Cma20g00410 CCT 254 424 U-box Gene Family AT1G71020 57.1 3.1e-46 183.7
Cma04g01383 CST 241 390 U-box Gene Family AT1G71020 53.9 7.3e-40 162.5
Cma04g00997 CCT 6 643 U-box Gene Family AT1G23030 56.7 6.1e-108 389.0
Cma04g00054 . 18 670 U-box Gene Family AT1G23030 54.5 4.9e-105 379.4
Cma01g00596 CCT,CST 93 638 U-box Gene Family AT2G28830 59.1 1.4e-101 367.9
Cma20g00410 CCT 93 634 U-box Gene Family AT2G28830 50.1 2.1e-97 354.0
Cma13g00132 CCT,CST 92 428 U-box Gene Family AT2G28830 56.8 4.8e-94 342.8
Cma01g00596 CCT,CST 1 662 U-box Gene Family AT3G46510 68.7 1.8e-169 593.6
Cma13g00132 CCT,CST 1 634 U-box Gene Family AT3G46510 68.6 4.0e-161 565.8
Cma20g00410 CCT 11 637 U-box Gene Family AT3G46510 66.3 6.3e-159 558.5
Cma18g00906 CST 30 645 U-box Gene Family AT3G46510 58.4 1.9e-123 440.7
Cma04g01383 CST 6 615 U-box Gene Family AT3G46510 53.3 3.5e-109 393.3
Cma18g00906 CST 22 647 U-box Gene Family AT3G54850 67.3 8.1e-164 574.7
Cma04g01383 CST 8 617 U-box Gene Family AT3G54850 61.4 2.0e-141 500.4
Cma20g00410 CCT 13 627 U-box Gene Family AT3G54850 56.4 8.5e-113 405.2
Cma01g00596 CCT,CST 8 641 U-box Gene Family AT3G54850 54.6 1.8e-102 370.9
Cma20g00717 . 97 650 U-box Gene Family AT5G42340 65.9 7.3e-123 438.7
Cma07g01227 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cma03g00299 CST 9 669 U-box Gene Family AT5G01830 56.8 4.1e-198 688.7
Cma18g00432 CST 44 750 U-box Gene Family AT1G29340 68.1 9.8e-246 847.0
Cma13g00582 CST 1 710 U-box Gene Family AT1G29340 67.1 6.6e-242 834.3
Cma01g00369 . 61 476 U-box Gene Family AT5G37490 50.1 5.2e-109 392.1
Cma06g00527 CCT 2 407 U-box Gene Family AT3G52450 54.3 1.8e-125 446.8
Cma03g00257 . 4 422 U-box Gene Family AT3G52450 53.8 1.2e-121 434.1
Cma07g01176 . 3 403 U-box Gene Family AT3G52450 52.1 3.8e-112 402.5
Cma06g00527 CCT 2 406 U-box Gene Family AT2G35930 56.0 2.8e-125 446.0
Cma03g00257 . 4 422 U-box Gene Family AT2G35930 52.0 4.0e-119 425.6
Cma07g01176 . 3 403 U-box Gene Family AT2G35930 53.6 3.3e-113 406.0
Cma04g00485 . 7 420 U-box Gene Family AT3G19380 64.8 9.3e-148 520.8
Cma04g00485 . 1 420 U-box Gene Family AT1G49780 65.3 5.6e-153 538.1
Cma03g01083 CST 1 411 U-box Gene Family AT5G64660 52.8 4.1e-119 425.6
Cma07g00789 CST 1 411 U-box Gene Family AT5G64660 53.3 3.4e-118 422.5
Cma07g00789 CST 1 411 U-box Gene Family AT5G09800 51.8 7.2e-105 378.3
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT3G49810 65.6 2.0e-164 576.2
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT3G49810 62.9 2.3e-152 536.2
Cma12g00605 CCT,CST 23 450 U-box Gene Family AT3G49810 62.6 9.9e-148 520.8
Cma05g00129 CCT,CST 1 452 U-box Gene Family AT3G49810 61.3 1.9e-146 516.5
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT5G65920 64.6 3.8e-160 562.0
Cma05g00129 CCT,CST 23 452 U-box Gene Family AT5G65920 65.3 6.8e-149 524.6
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT5G65920 61.7 5.8e-148 521.5
Cma12g00605 CCT,CST 1 450 U-box Gene Family AT5G65920 60.5 2.5e-143 506.1
Cma06g01069 CST 54 928 U-box Gene Family AT2G45910 50.2 1.7e-225 780.0
Cma14g02042 CST 1 868 U-box Gene Family AT2G45910 50.5 4.9e-217 751.9
Cma08g00785 . 372 644 U-box Gene Family AT2G45910 51.6 1.5e-77 288.5
Cma05g01403 CST 4 718 U-box Gene Family AT2G19410 50.6 3.6e-209 725.7
Cma15g01353 . 23 805 U-box Gene Family AT4G25160 53.8 3.9e-222 768.8
Cma02g00976 . 50 835 U-box Gene Family AT4G25160 51.4 7.1e-216 748.0
Cma15g00312 CST 815 1309 U-box Gene Family AT5G40140 57.2 2.4e-95 347.1
Cma04g02726 CST 57 545 U-box Gene Family AT5G40140 55.7 2.4e-87 320.5
Cma13g00905 . 29 490 U-box Gene Family AT5G40140 53.7 3.4e-57 220.3
Cma05g00970 . 4 861 U-box Gene Family AT1G76390 56.4 6.2e-257 884.4
Cma05g00970 . 13 859 U-box Gene Family AT1G20780 58.0 1.4e-269 926.4
Cma05g00083 . 1 771 U-box Gene Family AT1G27910 62.0 1.3e-264 909.8
Cma18g00710 CCT 1 769 U-box Gene Family AT1G27910 62.6 7.1e-263 904.0
Cma04g01823 CCT 1 770 U-box Gene Family AT1G27910 61.5 4.5e-257 884.8
Cma12g00066 . 1 805 U-box Gene Family AT1G27910 59.6 1.7e-256 882.9
Cma07g00649 CST 546 1137 U-box Gene Family AT5G67530 74.8 1.1e-263 906.4
Cma03g00917 . 1 594 U-box Gene Family AT5G67530 74.9 4.4e-260 894.4
Cma14g01990 . 3 157 U-box Gene Family AT5G67530 52.9 5.5e-45 179.9
Cma07g00578 . 71 859 U-box Gene Family AT5G65500 50.8 1.6e-209 726.9
Cma14g01841 CST 1 518 U-box Gene Family AT1G04510 74.7 1.5e-224 776.2
Cma06g01297 CST 1 521 U-box Gene Family AT1G04510 67.8 5.1e-204 708.0
Cma14g01841 CST 1 485 U-box Gene Family AT2G33340 73.3 7.1e-208 720.7
Cma06g01297 CST 1 490 U-box Gene Family AT2G33340 66.6 6.6e-190 661.0
Cma02g01666 . 11 279 U-box Gene Family AT3G07370 65.4 1.1e-99 360.5
Cma19g00176 . 10 278 U-box Gene Family AT3G07370 65.1 4.0e-99 358.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007211 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma11g01151 Cma_Chr11 FPKM 12.205544 14.941937 11.879519 12.143622 15.71128 15.142356 15.825071 12.851242 12.220702 13.160671