Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01159 ATGGAGGTTCTAAGAAGGGTCAGCGGCGGTGGACTGTTAGCGGCGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGATAACATGGGGTGGACGACCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTATGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTTGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATCGGCCACACCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCCTGATCTGGTAA 516 50.78 MEVLRRVSGGGLLAAVLLLLAAAVSEVSAKRWTVGDNMGWTTNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHIGHTPFVLTAVFAAARALIW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6707852 6709610 + CmaCh11G011590.1 Cma11g01159 303668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01159 171 Pfam Plastocyanin-like domain 40 122 IPR003245 GO:0009055
Cma11g01159 171 PANTHER LAMIN-LIKE PROTEIN 13 167 - -
Cma11g01159 171 SUPERFAMILY Cupredoxins 29 128 IPR008972 -
Cma11g01159 171 Gene3D - 28 131 IPR008972 -
Cma11g01159 171 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Cma11g01159 171 PANTHER BLUE COPPER PROTEIN 13 167 IPR039391 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01159 Cma-Chr11:6707852 Cma14g00567 Cma-Chr14:2833848 1.06E-90 dispersed
Cma11g01159 Cma-Chr11:6707852 Cma11g01160 Cma-Chr11:6711492 7.88E-33 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01159 - - csv:101210415 259.996