Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01159 | ATGGAGGTTCTAAGAAGGGTCAGCGGCGGTGGACTGTTAGCGGCGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGATAACATGGGGTGGACGACCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTATGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTTGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATCGGCCACACCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCCTGATCTGGTAA | 516 | 50.78 | MEVLRRVSGGGLLAAVLLLLAAAVSEVSAKRWTVGDNMGWTTNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHIGHTPFVLTAVFAAARALIW | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6707852 | 6709610 | + | CmaCh11G011590.1 | Cma11g01159 | 303668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01159 | 171 | Pfam | Plastocyanin-like domain | 40 | 122 | IPR003245 | GO:0009055 | |
Cma11g01159 | 171 | PANTHER | LAMIN-LIKE PROTEIN | 13 | 167 | - | - | |
Cma11g01159 | 171 | SUPERFAMILY | Cupredoxins | 29 | 128 | IPR008972 | - | |
Cma11g01159 | 171 | Gene3D | - | 28 | 131 | IPR008972 | - | |
Cma11g01159 | 171 | ProSiteProfiles | Phytocyanin domain profile. | 30 | 130 | IPR003245 | GO:0009055 | |
Cma11g01159 | 171 | PANTHER | BLUE COPPER PROTEIN | 13 | 167 | IPR039391 | GO:0009055 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01159 | Cma-Chr11:6707852 | Cma14g00567 | Cma-Chr14:2833848 | 1.06E-90 | dispersed | |
Cma11g01159 | Cma-Chr11:6707852 | Cma11g01160 | Cma-Chr11:6711492 | 7.88E-33 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01159 | - | - | csv:101210415 | 259.996 |