Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01235 | ATGGTTAGCGAAGAAGAAGCTCTAATCCAAAAGGTGGTGGATTTGTATGAGCAAATCTCTGGCCTTGAAAGCCTCAAACCTTGTAAGCATGTCGACACTCTGTTCACAGAGTTGGTGGTCACGTGCATGCCACCCACCAGCCCTAATTTCCACATCAATTCACTCTCAAACCCTCTTCAACAAATGAGATCAAATCTGATCCGCCTTTGCGGCCAAGCTGAGTCCCTTTTGGAGTCCCATTTCTCTGATCTCTTAGCCAATTTTGATTACCCTCTTCACCATCTCCATCTCTTCCCTTACTTCTCCAATTATCTCAAGCTTAGCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCATCCTCCCCTCCTCCGTTGCCTTCGTCGGCTCCGGCCCTCTTCCTCTCACCTCCATCGTCCTCGCCACCCGCCACCTCCCCTCCACCTCCTTCCACAATTATGATCTCGACCCACTTGCTAATTCCCAGGCGTCAAAATTGGTATCGGTGGACTCGGACCTGAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGTTGAAGGAGTACGAGGTTGTGTTTTTGGCAGCTCTAGTAGGAATGGAGAAGGAGGAGAAATTGAGAGTGATAGAGCATTTGTGTGAGTTCATGGCGGAAGGGGCTTGTTTGATGGTGAGAAGTGCTCATGGAGGAAGGGCTTTCCTTTATCCTGTGGTGGAGGAATGTGATTTGGTAGGGTTTGAGGTTCTATCGGTGTTTCATCCGAGTGATGAAGTTATAAACTCAGTGATAATTGCAAGAAAAAAGAAGAAGGATGATGATTGTTTGAAGATTGTTGGTGATGATAATCATGAAAATGGTATTGAAAATGGTGTTGTTGTTCATAACAAACAATGTTGTGATCACATTCATGGCTTCAACAATCATGGAGGAATGATTGAGGAGTTAGCTGAGTAG | 972 | 46.71 | MVSEEEALIQKVVDLYEQISGLESLKPCKHVDTLFTELVVTCMPPTSPNFHINSLSNPLQQMRSNLIRLCGQAESLLESHFSDLLANFDYPLHHLHLFPYFSNYLKLSLLEFSILRRHCPILPSSVAFVGSGPLPLTSIVLATRHLPSTSFHNYDLDPLANSQASKLVSVDSDLKTRMVFHTCDIMKVTEELKEYEVVFLAALVGMEKEEKLRVIEHLCEFMAEGACLMVRSAHGGRAFLYPVVEECDLVGFEVLSVFHPSDEVINSVIIARKKKKDDDCLKIVGDDNHENGIENGVVVHNKQCCDHIHGFNNHGGMIEELAE | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8123732 | 8125093 | + | CmaCh11G012350.1 | Cma11g01235 | 303744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01235 | 323 | Pfam | Nicotianamine synthase protein | 4 | 276 | IPR004298 | GO:0030410|GO:0030418 | |
Cma11g01235 | 323 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 3 | 308 | IPR004298 | GO:0030410|GO:0030418 | |
Cma11g01235 | 323 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 278 | IPR004298 | GO:0030410|GO:0030418 | |
Cma11g01235 | 323 | Gene3D | Vaccinia Virus protein VP39 | 7 | 275 | IPR029063 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma05g01074 | Cma11g01235 | CCT | |
Cma11g01235 | Cma12g01028 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00403 | Cma-Chr10:1871401 | Cma11g01235 | Cma-Chr11:8123732 | 9.22E-101 | dispersed | |
Cma11g01235 | Cma-Chr11:8123732 | Cma12g01028 | Cma-Chr12:8172889 | 1.08E-111 | dispersed | |
Cma11g01235 | Cma-Chr11:8123732 | Cma05g01074 | Cma-Chr5:8505799 | 3.51E-125 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01235 | K05953 | - | csv:101218907 | 491.115 |