Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01288 | ATGGCCACCTCTGCTATCCAGCAATCCGCCTTTGCCGGCCAGCCTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAAGGTCGGCGCTTTCGGTGGCAGCCGCTTCACCATGCGGCGGACGGTCAAGAGTGCCCCTCAAAGCATATGGTATGGTCCAGATCGCCCAAAATACTTGGGACCCTTCTCTGAACAAACACCATCCTACCTGACTGGAGAGTTCCCAGGTGACTACGGCTGGGACACAGCCGGTCTGTCAGCAGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCCAGATGGGCCATGCTCGGTGCACTAGGCTGTGTCTTCCCTGAAGTCCTTGCAAAGAATGGTGTCAAGTTCGGTGAATCAGTATGGTTCAAGGCCGGTTCTCAGATCTTCTCCGAAGGTGGCCTCGATTACCTTGGCAACCCAAACCTCGTCCACGCTCAGAGCATCCTGGCCATCTGGGCTTGCCAGGTTGTGCTGATGGGGTTCGTGGAAGGCTACCGGGTTGGGGGCGGTCCCCTTGGTGAAGGGCTGGACCCAATCTACCCAGGAGGGGCGTTCGACCCACTGGGATTGGCGGATGACCCAGATGCCTTTGCTGAGTTGAAGGTGAAGGAGCTGAAGAATGGAAGGCTGGCAATGTTCTCCATGTTTGGATTCTTCGTGCAGGCTATTGTCACTGGAAAGGGTCCTATTGAGAATCTGTTCGACCATGTTGCAGACCCTGTTGCCAACAATGCTTGGGCTTATGCCACCAACTTCGTCCCCAGAAAATGA | 798 | 56.02 | MATSAIQQSAFAGQPALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPRK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8614659 | 8617451 | - | CmaCh11G012880.1 | Cma11g01288 | 303797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01288 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - | |
Cma11g01288 | 265 | Pfam | Chlorophyll A-B binding protein | 66 | 231 | IPR022796 | - | |
Cma11g01288 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Cma11g01288 | 265 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED | 1 | 264 | - | - | |
Cma11g01288 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 264 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00918 | Cma-Chr4:4748020 | Cma11g01288 | Cma-Chr11:8614659 | 4.05E-124 | dispersed | |
Cma09g00012 | Cma-Chr9:81081 | Cma11g01288 | Cma-Chr11:8614659 | 1.49E-63 | dispersed | |
Cma11g01288 | Cma-Chr11:8614659 | Cma01g00265 | Cma-Chr1:1250267 | 1.99E-150 | dispersed | |
Cma16g00808 | Cma-Chr16:4464485 | Cma11g01288 | Cma-Chr11:8614659 | 1.72E-123 | dispersed | |
Cma11g01288 | Cma-Chr11:8614659 | Cma19g00866 | Cma-Chr19:8059990 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01288 | K08913 | - | csv:101212963 | 536.954 |