Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01327 | ATGAGAGAGGTTGAAGGAAGAAGGCTATGCCAGGAGTTTTCAGCTGGGTATTATGGCCTTTGTACTGTTGGGGGAATGCTCAGTGCTGGGGCTACCCATCTTGCTCTTACGCCTCTTGATGTCTTGAAGGTTAATATGCAGGTGAATCCTATTAAGTACAATGGCATTTCTTCTGGTTTTTCGGTTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCAGGCAAGTTATTCGGATATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTACGAATACTTCAAGAAGTCTTACTCTGATTTGTTGGAAGGCCACAGCAGAAGTTCCATATACTTTCTCAGTAGTGCTTCTGCTCAATTCTTTGCTGATGTTGCTCTCTGCCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAGCCCTATTATGCCAAGGGATTGGCTGATGGCTTTCCAAAGCTATACTACAGTGAAGGTCTTTCTGGTTTCTACCGAGGGCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGGTTATGTTCTCGACATTTGAGCATTCGGTGGACTTCATATATCGAAAGATCATTCGGCGTAGAAAGGAAGATTGCTCGAGAACACAACAGCTCGGTGTTACATGTTTGGCTGGCTATGCAGCTGGAGCTGTTAGTACTATTGTCTCGAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAAAAGGCTGATAGTATAGTGCAGGCAGTGAAGAACATAGGATTTGGCAATCTATTTACTAGAAGTCTCCCTGTCAGAATTGCACTTGTTGGTCCTCTTGTTACATCGCAGTGGTTCCTTTATGACACAATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGGTCAACAGGCAATTGGAAGAAGCTTAG | 918 | 44.34 | MREVEGRRLCQEFSAGYYGLCTVGGMLSAGATHLALTPLDVLKVNMQVNPIKYNGISSGFSVLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKSYSDLLEGHSRSSIYFLSSASAQFFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMVMFSTFEHSVDFIYRKIIRRRKEDCSRTQQLGVTCLAGYAAGAVSTIVSNPADNIVSSLYNKKADSIVQAVKNIGFGNLFTRSLPVRIALVGPLVTSQWFLYDTIKVLSGLPTSGGVNRQLEEA | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8803788 | 8808728 | - | CmaCh11G013270.1 | Cma11g01327 | 303836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01327 | 305 | Gene3D | Mitochondrial carrier domain | 21 | 289 | IPR023395 | - | |
Cma11g01327 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 193 | IPR018108 | - | |
Cma11g01327 | 305 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 6 | 304 | IPR044677 | GO:0005315|GO:1990547 | |
Cma11g01327 | 305 | PANTHER | MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL | 6 | 304 | - | - | |
Cma11g01327 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 289 | IPR018108 | - | |
Cma11g01327 | 305 | Pfam | Mitochondrial carrier protein | 23 | 101 | IPR018108 | - | |
Cma11g01327 | 305 | Pfam | Mitochondrial carrier protein | 114 | 196 | IPR018108 | - | |
Cma11g01327 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 16 | 100 | IPR018108 | - | |
Cma11g01327 | 305 | SUPERFAMILY | Mitochondrial carrier | 21 | 285 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01327 | Cma-Chr11:8803788 | Cma15g00816 | Cma-Chr15:4108364 | 3.48E-109 | dispersed | |
Cma11g01327 | Cma-Chr11:8803788 | Cma11g01543 | Cma-Chr11:10063250 | 4.15E-110 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01327 | K15102 | - | csv:101219895 | 566.229 |