Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01327 ATGAGAGAGGTTGAAGGAAGAAGGCTATGCCAGGAGTTTTCAGCTGGGTATTATGGCCTTTGTACTGTTGGGGGAATGCTCAGTGCTGGGGCTACCCATCTTGCTCTTACGCCTCTTGATGTCTTGAAGGTTAATATGCAGGTGAATCCTATTAAGTACAATGGCATTTCTTCTGGTTTTTCGGTTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCAGGCAAGTTATTCGGATATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTACGAATACTTCAAGAAGTCTTACTCTGATTTGTTGGAAGGCCACAGCAGAAGTTCCATATACTTTCTCAGTAGTGCTTCTGCTCAATTCTTTGCTGATGTTGCTCTCTGCCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAGCCCTATTATGCCAAGGGATTGGCTGATGGCTTTCCAAAGCTATACTACAGTGAAGGTCTTTCTGGTTTCTACCGAGGGCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGGTTATGTTCTCGACATTTGAGCATTCGGTGGACTTCATATATCGAAAGATCATTCGGCGTAGAAAGGAAGATTGCTCGAGAACACAACAGCTCGGTGTTACATGTTTGGCTGGCTATGCAGCTGGAGCTGTTAGTACTATTGTCTCGAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAAAAGGCTGATAGTATAGTGCAGGCAGTGAAGAACATAGGATTTGGCAATCTATTTACTAGAAGTCTCCCTGTCAGAATTGCACTTGTTGGTCCTCTTGTTACATCGCAGTGGTTCCTTTATGACACAATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGGTCAACAGGCAATTGGAAGAAGCTTAG 918 44.34 MREVEGRRLCQEFSAGYYGLCTVGGMLSAGATHLALTPLDVLKVNMQVNPIKYNGISSGFSVLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKSYSDLLEGHSRSSIYFLSSASAQFFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMVMFSTFEHSVDFIYRKIIRRRKEDCSRTQQLGVTCLAGYAAGAVSTIVSNPADNIVSSLYNKKADSIVQAVKNIGFGNLFTRSLPVRIALVGPLVTSQWFLYDTIKVLSGLPTSGGVNRQLEEA 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8803788 8808728 - CmaCh11G013270.1 Cma11g01327 303836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01327 305 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Cma11g01327 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Cma11g01327 305 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 304 IPR044677 GO:0005315|GO:1990547
Cma11g01327 305 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 6 304 - -
Cma11g01327 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
Cma11g01327 305 Pfam Mitochondrial carrier protein 23 101 IPR018108 -
Cma11g01327 305 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Cma11g01327 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Cma11g01327 305 SUPERFAMILY Mitochondrial carrier 21 285 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01327 Cma-Chr11:8803788 Cma15g00816 Cma-Chr15:4108364 3.48E-109 dispersed
Cma11g01327 Cma-Chr11:8803788 Cma11g01543 Cma-Chr11:10063250 4.15E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01327 K15102 - csv:101219895 566.229