Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01361 ATGTTAGTTGTTGGAGAATCCGCTTTAGCATTGGTTGAATTACATGATATTTTGTACATTGCATCACTTGGCACTGATACTGCAAGCTTTGGGGATTCCAGAAGATTCACTTTGAATTGTTTCTCTGAATCTCTGAAGGGAATCTTTGAGGATCCCGATCATCTTGGGGATCTTCCAGAAGTCAACAGACCAACTGATGGCTCTGGTATTTTGATCAATCTGACGGGGAAAAAGAGGTGGCAGCCTTTTGTTACTTGGATTATTAAGCTTCTTGGTAAATGCTTGGCTGAGGGAACCGTGTACGTTGAAGGGCTTATCAGTATGTCAGATGTTTCAGCAGCATGTTCTTTGTTATGTTATGGAGATGCCGATTTGCAAATGGCATGCTTTGATTTTGCACGCATTGTTGGATTGGTGATAGATGACGTCGTTCCTTATCAGCCTTTAATCCAGTCAATATCTACTATATTAAGTGAAGACAAACATGGGCTTCCTATATTTAGGAACGCATATTATGATGCTTCTATTGGAGATTGTCTTACTGTGCTATACTCCAAGTGTTGCGATGATGTTGTCAAGCTAACTGCTGCAGACATGGTTGGCATATTTTCACAGTCCCTTTGTAGAACCAAGAGCATGGAGCTCAAGGTTTCATTATGCAATGCATACATAAGGATTGCTAAAATCTGCCCTTCTCATATCTGGAGGCCTGAAATACTCGTTGATATGCTTTCTTTTCCAGAACCTTGCTTTGCTTTGATAGATTGCTTCCAAGCAGCTCTATCTATTCTTGGTCCTGATTATGTTGGAGGGTCTTTACCTGGCTTGGGTTTGTCAGAATTGAGCAATAAATCAATTGAAAACTCAAAAGTTGGAGAAAAGAGATGCTTAGAGGATTTGGATACTGTTAAGAACAAAAAACTGAAGGTCGATGGAGAAATTGTGAGCTCCGAAGCTGATATACTGGTTGAATGCAAGAAGCCTCACATCAAAATATGTGAAACTGATGTGACTTATGCAAATAATTTGCATAATTTACTTGTTTCATTTATTGGATGTTCAAGAGCTTCGTCTATCAGAGCTGATGGTCTAAGACCAGAAGTTTCATTAACATCTCTTAGCATGCTGTGCATTGCATTCTGTCGGCACCCTGAAACTCATTTGTCCCAGGTCATATTTCAGGAGATGGTTTCATGGATTCCCTGGATATACAAACAGGCAAAGCAAGGAAGCTTGACTTCTCTCGATCTATCCACATTTCTTGAAGGAATTCACAACATGCTTCTTTTACCAACCCATGTATCTTCGTGTTTATTTTCACTCCTGTCTGGAAGTAATGATGAATGCACAGAAACTATGTCTGTGATACTTAAAGTTCCATGGACCCATTCAATCACCAGTTCTGAATCTTGCAAGCCATTGAAGACAAAATGCTTCTCTGTTCAGGTTGCATCCAAAGTTACTTCTATATTAAAGACTGAAACTGATCTTGAGGTCCTGGATTTGAGTCTTGTTGATGAAGATGATGAAGTTAGAATGGAAGCTGCCATTTCAATTCCAGTGATTGCTCTATGGACTGGTTTTGATAAGCTAACACAGTTATTTAGGAGGCTGGCGATCTTGCAGGGAGAAATGCATGACAAAGTTAAGAAAATTATCCCAGTTTCTCTTGGGTTTTTGTCATGCCTTTATGGATCTTGCCATTCGGTAGATGGTCAAAATATGAGCAGGTGCAAATTATTTTTAAATACAAACAGCGATAGATGCTGCCAGACAGTGGACTATATGCTTCAGGGATTTTGGTGTTCAAAGTGTGATCAGTCTGTTCTGCATGATCATAAACTTTATACAAACATAATTGAGCCACCTCACTGTTACCCAAAAATGAATTTGGATTGTGATGTTGTCCATTTGATGTCGATGTTCTTTAAACTTCTTTTTGATGAGTCGTCAGAAGAGGTTCAAGTTTCTTGTGTGGAGACTCTTGGACGCATTCTGGTCCATGGGACTGGGAATGTTCTACTTCAAACAAGGATTGATTGGCTTAAATGTATTGAGTTTTTGCTTCTTAACAGAAAAAAAGCAATAAGAGAAGCATTCTGCCTTCAAATTAGTTCCTTACTCGAGGACCACGTACTGAGTTGCCTTTTCCCAGAAGAAAACTTCTTAAACAAAAGGAAAGAGCTAATGTTTTTGGACTTTATTAAACAAGCAATGGTACCAACTACAGATCCCCAAATTCTCAACACTCTACTAGAATCTGTAGCAAACCTCATGACTGCAGTTGATATTCACAGTGATTTTTTTTCTCGTTCTCTTTTATTGTTGGTTGATCATCTTGACAATCCACAAATAACAGTGAGGATGAGTGCCTCAAGGTCAATCCACAATGCTTGCCGTTTTCATTTTAATGGGAAATTTGAATTAATCTTTTCAAAAGTTGTCCATCTTCGGAATGAGCTATTTGCTTATCTCTCCACGGGACTTGTTAGCCGTCCAAAAATTGTACAAGAATTTGCAGAAGCTGTTTTGGGAGTTGAAACTGAAGTATTTGTTAAGAAAATGATTCCCGTTGTTCTTCCAAAGCTGGTGGTCTCTCATCAGAATAATGATCAAGCTGTCGAATCATTATATGAATTAGCTAAATGTGTGGACACTGATATGGTGACGTTGATAGTCAATTGGTTGCCAAAAGTTCTTGCCTTTGTTCTCTACCAAGCGAATGGGAAGGAGTTACTTTCTGCCTTGGAATTTTATCATGCTCACACTGGTTCAAATCAGGAAGAGATTTTTGCAGCTGCATTACCTGCTCTTTTAGATGAACTAGTATGCTTTGTGGATGGTGGAGATTCAGATGAAGTCAGTACAAGGTTAGCAAGAGTTCCAGAGATGATATTACAAGTTGCTAGAGTTCTCACTGGTGGGGACGATCTTCCAGGATTTTTGAGAAATCATTTTGTTGGTCTCCTCAACAGCATCGATAGGAAAATGCTCCATGCAGAGGATGTTTGCCTGCAGAAACAAGCTCTGCAACGTATTGAAATGCTGATAAAATTGATGGGTTCTCATCTTAGTACCTATGTTCCGAAACTAATGGTTCTACTTATGCATGCTATTGGGAAGGAAGTACTGCAAAGTGAAGGTCTCATTGTCTTGAATTCTTTTATCCAACAATTGGCTAAAGTATCACCATCTAGCATCAAGTATGTGATTTCTCAAGTCTTTGCTGCACTTGTGCCTTTCCTGGAGAGAGATGAAACTTCCATTCATTTAGATATGGTGGTTAAAATTTTGGAAGAACTTGTTTTAAAAAATAGGAGTATACTAAAGGCGCATATTCGCGAATTCCCTCCATTGCCTCATATTTCTGCTCTGACGGAGGTGAACAGAGCTATACATGAAACTCGTGGGTCAATGACTCTAAAGGATCAGCTGCGAGATTTTGTTGATGGCTTAAATCATGAGAACTTGAATGTGAGATACATGGTGGCATGTGAACTGAGCAAGTTGCTGAACATGAGAAGCAAGGAGGTTACAAGTTTTATAAGTGCTGAAGCGGATCCAGACATGGATGTTTTGAGCTCACTAATTTCCTCCTTGCTGAGAGGTTGTGCTGAGGAGTCAAGGACTGCAGTGGGCCAGCGGCTGAAATTGGTTTGTGCTGATTGTCTTGGAGCACTAGGTGCCGTGGATCCTGCTAAAGTGAAGAGCTTTTCATGCCAACGATTTAAAATTGAATGCTCTGATGATGATCTAATCTTTGAATTGATTCACAAACATTTAGCTCGGGCCTTTAGAGCAGCACCAGATACCATTATTCAAGATTCAGCGGCATTAGCCATACAGGAGCTTCTAAAAATTGCAGGATGTAAAGCATCACTGGATGAAAATGCTGCTGCTTTAGAGTCACCATCGTTGAAAGACAAAGGTGCTTCAACAACTGTCGCGTCTGATTCTTCAGATGGTGGTAATGCGATGAGTATGAGGGGTCAGAAATTGTGGGGACGCTTCTCTGATTATGTGAAAGAAATTATAGCACCTTGCTTAACCTCAAGATTTCAGCTCCCGAATGTGGCTGACTCTGCATTTGTTAGTTCAATATATCGGCCCGGTATGTCATTCAGAAGATGGATATTTTTTTGGATAAAAAAGCTAACTGCGCATGCCACTGGGTCTCGTGCCAGTATTTTTCATGCTTGTCGAGGTATAGTACGGCATGATATGCAGACAGCTGTCTATCTGCTGCCTTATTTAGTTCTTAGTGCCGTCTGTCATGGTACAGTGGAGGCACGTCATGGCATAACAGAAGAAATTTTGTCTGTTCTCAATGCTGCAGCTTCCGAGAATGGCGTGGCTGTGATTAACGGAAATATTGGAGGGCAAAGTGATGTTTGCATTCAAGCTGTGTTTACTCTTCTTGATAATCTAGGACAGTGGGGGGACGACGTTGAGCGAGGATTATCACTTTCTCAATCTGGTCAGTCATCGTCTTCAAAGAGTTCGGTGGCCAAGTCAAAGGAATCAAGTTCAAATGCTCAAGTTGATCAGGAGCAACTCCTGGTTCAGTGTAGATATGTTTCACAGCTTTTGGATGCAATCCCAAAAATCACTCTTGCTAGGGCTTCCTTGAGCTGCCAGGCCTATGCTAGATCTTTGATGTATTTTGAGTCATATGTTCGAGGAAAATCTGGTTCTTTTAACCCTGCGGCTGAGAGAAGTGGCATCTTTGAGGACGAAGATATTTCATATCTCATGGAAATATATAGTTATCTCGATGAGCCTGATGGTATATCTGGCTTGGCATGTTTACGTAAATCCTTGAGGTTACAAGACCAACTTTTGATTACTAAAAAAGCTGGAAATTGGGCAGAAGTATTGACCTTTTGTGAACAAGCTTTGCATATGGAACCAAATTCTGTTCAGAGGCATTCAGATGTTCTTAATTGTTTGTTAAATATGTGTCACCTTCAAGCCATGGTTACTCATGTGGATGGTTTAATTACGAGGATTCCTCAATACAAGAAAACATGGTGCATGCAAGGAGTGCAGGCAGCTTGGAGGCTTGGCAGGTGGGACCTGATGGATGAATACCTCACGGGAGCTGATGAAGAAGGTCTTCTTTGTAGCAGCTCTGAAAGTAATGCTTCTTTTGACATGGACGTGGCAAAAATTCTTCAGGCAATGATGAAGAAGAATAAGTTTTCAGTTTCTGAGAAAATTGCTCTATCCAAACAATCTCTGATTGCCTCTCTTGCTGCTGCTGGGATGGATTCTTACACACGTGCTTATCCATTTGTTGTGAAACTTCACCTTCTGAAAGAGCTCGAGGACTTCCATAACCTTCTTTTTAATGACTCTTTCTTGGAAAAGACATTCCGTGTGGATGATCAGGAATTTTCAGAAGTGATTCAAAATTGGGAGAATCGGCTGAAATTTACTCAGTCGTCACTCTGGGCAAGAGAGCCACTTCTGTCCTTTCGAAGGTTGGTTTTTGGTGCTAGTGGTTTTGGTGCTCAAGTTGGGAACTGCTGGCTTCAGTATGCAAAGCTGTGTCGCTCTGCTGGTCATTATGAAACAGCAAACCGTGCAATTCTTGAAGCTCAGGCTTCTGGTGCACCTAATGTTCATATGGAGAAGGCCAAGCTTTTATGGAGCACTAGGCGGTCAGATGGTGCTATCTCAGAATTGCAACAATCTCTTCTTAACATGCCTGTGGAAGTTATAGGTTCTGCTGCAATGTCTTCAATAACAAGCCTTTCCTTGGTTCCAATGAATCCAGCTTCTTTAATATGTGATACTCAAGCTTTGAATGAGAATAGAGATATTGCAAAGACTCTTCTCCTGTACTCGAGGTGGATACATTGCACTGGGCAAAAGCAAAAGGAAGATGTCATCAATCTTTATTCAAGAGTAAAGGAGCTACAGCCCAAGTGGGAGAAAGGATACTTTTTTATGGCTAGGTATTGTGATGAATTGCTTGCAGATGCCAGGAAACGCCAGGAAGAGAGTATTGAACAAGGTCCGAGAAAAGTCTCATCATCTTCTGCTGCTATTGGCTCTTCGAATATGAGTAACGAGAAGCCCTGGTGGTCTTATGTCCCTGATGTACTCTTGTTCTATGCGAAAGGACTTCACAGGGGTCACAAAAATCTATTTCAAGCACTTCCAAGATTGTTAACTTTGTGGTTTGACTTCGGGAGCATCTACCAAAGAGTTGGTTCATCATCCAACAAGGATTTGAAAAGTGTTCATGGAAAGGTTCTGAGCATCATGCGAGGTTGTTTGAAGGATTTGCCTACGTATCAATGGTTGGCTGTACTGCCTCAGTTAGTTTCAAGGATTTGCCATCAGAATGAAGAAACTGTTCGATTGGTCAAACACATAATTACCTCTGTTGTTCGACAGTATCCTCAGCAAGCTCTTTGGATAATGGCCGCAGTTTCCAAATCCACCGTTCCTTCAAGACGAGAGGCAGCCATGGAGATCATCCAATCTGCAAAAAAAGATCGTAGTCAAGGAAATAGTGGGAACAATTTATTTCTTCAGTTTGCCAGTCTAATTGATCACCTAATCAAGTTGTGCTTCCATCCTGGTCAGCAAAGAGCGAGGAACATTAATATCTCTACGGAATTTAGCACATTAAAGAGAATGATGCCATTGGAGATTATTATGCCAATTCAACAATCTATGGTTGTTAATCTACCAAAATATGACGTGAATCTCACTGATTCACTGAGGTCTGACATCTTTTCTGCCACAGAGCTTCCTACAATATCAGGAATAGCCGATGAGGCTGAGATTCTTTCATCACTTCAGCGACCTAAGAAAATCATTCTGTTGGGTAGTGATGGTATTGAGCGGCCATTCCTCTGCAAACCAAAAGATGATCTCCGGAAGGATGCTCGCATGATGGAGTTCACAGCTATGATAAACCGTTTATTATCCAAATATCCAGAAAGCCGCCGGAGGAAGCTCTACATACGCACCTTTGCTGTGATACCTCTGACAGAAGATTGTGGTATGGTAGAATGGGTTCCTCATACCCGTGGTCTTAGACATATACTGCAAGACGTATATATAACTTGTGGTAAGTTTGATAGGCAGAAGACAAATCCTCAAATTAAGCGAATATATGACCAGTGCCAAGGTAAAATATCTGAAGATGAGATGCTGAAGACAAAAATTCTTCCTATGTTCCCTCCCATTTTCCATAGATGGTTTTTGAATACCTTTTCAGAACCAGCTGCTTGGTTTAGGGCGCGGATAGCTTATGCGCATACAACTGCAGTTTGGTCTATGGTTGGACACATTGTGGGGCTGGGTGATAGACATGGTGAAAATATTCTTTTTGATTCTACTACGGGTGACTGTGTTCATGTTGATTTCAGTTGTTTATTTGACAAAGGTCTGCAGCTTGAAAAGCCTGAACTGGTGCCTTTTAGGCTAACCCAGAACATGATTGATGGATTAGGAATCACTGGGTATGAGGGTGTTTTCTTGAGAGTTTGTGAAATTACCCTTTCTGTATTGAGGACTCATCGGGATACTTTGATGAGCATACTTGAAACTTTCATTCATGATCCGCTCGTGGAGTGGACAAAATCTCACAAATCCAGTGGTGTTGAAGTTCAGAATCCTCATGCTCAGCGAGCCATCAGTAACATTGAGGATAGGTTACAAGGCGTAGTTGTTGGTGTTGGAGCTGCACCATCTTTGCCCCTTGCTGTCGAAGGTCAGGCTCGTCGATTAATTGCGGAAGCAGTCTCTCACAAAAATCTTGGGAAGATGTACATATGGTGGATGCCATGGTTTTAG 7815 41.05 MLVVGESALALVELHDILYIASLGTDTASFGDSRRFTLNCFSESLKGIFEDPDHLGDLPEVNRPTDGSGILINLTGKKRWQPFVTWIIKLLGKCLAEGTVYVEGLISMSDVSAACSLLCYGDADLQMACFDFARIVGLVIDDVVPYQPLIQSISTILSEDKHGLPIFRNAYYDASIGDCLTVLYSKCCDDVVKLTAADMVGIFSQSLCRTKSMELKVSLCNAYIRIAKICPSHIWRPEILVDMLSFPEPCFALIDCFQAALSILGPDYVGGSLPGLGLSELSNKSIENSKVGEKRCLEDLDTVKNKKLKVDGEIVSSEADILVECKKPHIKICETDVTYANNLHNLLVSFIGCSRASSIRADGLRPEVSLTSLSMLCIAFCRHPETHLSQVIFQEMVSWIPWIYKQAKQGSLTSLDLSTFLEGIHNMLLLPTHVSSCLFSLLSGSNDECTETMSVILKVPWTHSITSSESCKPLKTKCFSVQVASKVTSILKTETDLEVLDLSLVDEDDEVRMEAAISIPVIALWTGFDKLTQLFRRLAILQGEMHDKVKKIIPVSLGFLSCLYGSCHSVDGQNMSRCKLFLNTNSDRCCQTVDYMLQGFWCSKCDQSVLHDHKLYTNIIEPPHCYPKMNLDCDVVHLMSMFFKLLFDESSEEVQVSCVETLGRILVHGTGNVLLQTRIDWLKCIEFLLLNRKKAIREAFCLQISSLLEDHVLSCLFPEENFLNKRKELMFLDFIKQAMVPTTDPQILNTLLESVANLMTAVDIHSDFFSRSLLLLVDHLDNPQITVRMSASRSIHNACRFHFNGKFELIFSKVVHLRNELFAYLSTGLVSRPKIVQEFAEAVLGVETEVFVKKMIPVVLPKLVVSHQNNDQAVESLYELAKCVDTDMVTLIVNWLPKVLAFVLYQANGKELLSALEFYHAHTGSNQEEIFAAALPALLDELVCFVDGGDSDEVSTRLARVPEMILQVARVLTGGDDLPGFLRNHFVGLLNSIDRKMLHAEDVCLQKQALQRIEMLIKLMGSHLSTYVPKLMVLLMHAIGKEVLQSEGLIVLNSFIQQLAKVSPSSIKYVISQVFAALVPFLERDETSIHLDMVVKILEELVLKNRSILKAHIREFPPLPHISALTEVNRAIHETRGSMTLKDQLRDFVDGLNHENLNVRYMVACELSKLLNMRSKEVTSFISAEADPDMDVLSSLISSLLRGCAEESRTAVGQRLKLVCADCLGALGAVDPAKVKSFSCQRFKIECSDDDLIFELIHKHLARAFRAAPDTIIQDSAALAIQELLKIAGCKASLDENAAALESPSLKDKGASTTVASDSSDGGNAMSMRGQKLWGRFSDYVKEIIAPCLTSRFQLPNVADSAFVSSIYRPGMSFRRWIFFWIKKLTAHATGSRASIFHACRGIVRHDMQTAVYLLPYLVLSAVCHGTVEARHGITEEILSVLNAAASENGVAVINGNIGGQSDVCIQAVFTLLDNLGQWGDDVERGLSLSQSGQSSSSKSSVAKSKESSSNAQVDQEQLLVQCRYVSQLLDAIPKITLARASLSCQAYARSLMYFESYVRGKSGSFNPAAERSGIFEDEDISYLMEIYSYLDEPDGISGLACLRKSLRLQDQLLITKKAGNWAEVLTFCEQALHMEPNSVQRHSDVLNCLLNMCHLQAMVTHVDGLITRIPQYKKTWCMQGVQAAWRLGRWDLMDEYLTGADEEGLLCSSSESNASFDMDVAKILQAMMKKNKFSVSEKIALSKQSLIASLAAAGMDSYTRAYPFVVKLHLLKELEDFHNLLFNDSFLEKTFRVDDQEFSEVIQNWENRLKFTQSSLWAREPLLSFRRLVFGASGFGAQVGNCWLQYAKLCRSAGHYETANRAILEAQASGAPNVHMEKAKLLWSTRRSDGAISELQQSLLNMPVEVIGSAAMSSITSLSLVPMNPASLICDTQALNENRDIAKTLLLYSRWIHCTGQKQKEDVINLYSRVKELQPKWEKGYFFMARYCDELLADARKRQEESIEQGPRKVSSSSAAIGSSNMSNEKPWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSIYQRVGSSSNKDLKSVHGKVLSIMRGCLKDLPTYQWLAVLPQLVSRICHQNEETVRLVKHIITSVVRQYPQQALWIMAAVSKSTVPSRREAAMEIIQSAKKDRSQGNSGNNLFLQFASLIDHLIKLCFHPGQQRARNINISTEFSTLKRMMPLEIIMPIQQSMVVNLPKYDVNLTDSLRSDIFSATELPTISGIADEAEILSSLQRPKKIILLGSDGIERPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDVYITCGKFDRQKTNPQIKRIYDQCQGKISEDEMLKTKILPMFPPIFHRWFLNTFSEPAAWFRARIAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGVFLRVCEITLSVLRTHRDTLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQRAISNIEDRLQGVVVGVGAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF 2604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9012553 9027521 + CmaCh11G013610.1 Cma11g01361 303870

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01361 2604 MobiDBLite consensus disorder prediction 1487 1510 - -
Cma11g01361 2604 Pfam Phosphatidylinositol 3- and 4-kinase 2288 2533 IPR000403 -
Cma11g01361 2604 SMART FATC_2 2572 2604 IPR003152 GO:0005515
Cma11g01361 2604 Gene3D Tetratricopeptide repeat domain 1617 2002 IPR011990 GO:0005515
Cma11g01361 2604 Pfam FAT domain 1682 2060 IPR003151 GO:0005515
Cma11g01361 2604 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2427 2447 IPR018936 GO:0016301
Cma11g01361 2604 ProSiteProfiles FAT domain profile. 1537 2150 IPR014009 -
Cma11g01361 2604 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 55 2600 - -
Cma11g01361 2604 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 55 2600 - -
Cma11g01361 2604 CDD PIKKc_ATR 2258 2534 - -
Cma11g01361 2604 SMART UME_cls 978 1084 IPR012993 GO:0004674
Cma11g01361 2604 SUPERFAMILY ARM repeat 112 1257 IPR016024 -
Cma11g01361 2604 ProSiteProfiles FATC domain profile. 2572 2604 IPR003152 GO:0005515
Cma11g01361 2604 Gene3D - 2401 2563 IPR036940 GO:0016301
Cma11g01361 2604 Pfam UME (NUC010) domain 981 1081 IPR012993 GO:0004674
Cma11g01361 2604 Gene3D - 629 935 IPR011989 -
Cma11g01361 2604 SUPERFAMILY Protein kinase-like (PK-like) 2190 2536 IPR011009 -
Cma11g01361 2604 SMART pi3k_hr1_6 2288 2593 IPR000403 -
Cma11g01361 2604 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2261 2574 IPR000403 -
Cma11g01361 2604 Gene3D - 2222 2345 - -
Cma11g01361 2604 Pfam FATC domain 2573 2604 IPR003152 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01361 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] - csv:101212807 4599.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00687 Cma-Chr3:5658268 Cma11g01361 Cma-Chr11:9012553 4.30E-17 dispersed
Cma07g00429 Cma-Chr7:1845481 Cma11g01361 Cma-Chr11:9012553 2.36E-17 dispersed
Cma11g01361 Cma-Chr11:9012553 Cma20g00881 Cma-Chr20:4216463 4.97E-50 dispersed
Cma11g01361 Cma-Chr11:9012553 Cma11g00094 Cma-Chr11:460913 1.36E-80 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g215 . . . . . Bpe12g00133 . . . . . . . . Sed04g3826 Cpe04g00609 . Bhi05g01671 Tan02g0643 Cmetu01g0717 . Hepe02g0401 . . Cla02g00402 Cam02g0407 Cec02g0407 Cco02g0423 Clacu02g0410 Cmu02g0406 Cre02g0741 . . . . . Csa07g00128 . Cme01g01220 . Blo13g00493 . . . . . Bma08g00743 . . . Cma11g01361 . Car11g01387 . . . . . . . . . . . . . . . . . Lsi11g01223 . Chy01g00655 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012534 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma11g01361 Cma_Chr11 FPKM 0.422453 0.504563 0.6814 0.581606 1.531662 1.354831 1.60715 1.035264 0.832936 0.987135