Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01365 | ATGGATTCAGGAAGTTTCTTAATCGTTGTTTCGATCGCTTCGGATTCTCTATGGGTATGGAACAAAACAATCACGATGCCGAGGAGGGGACTCTGGAGATTGGCATGGGTAGAATATAGAACAGTCTCTGGTGTTGCTGGTCCATTGGTTATTCTGGACAAAGTCAAGGGACCTAAGTTTCAGGAGATTGTTAATATTCGGCTAGGAGATGGATCAACCAGGCGTGGTCAAGTCCTGGAAGTTGATGGAGAGAAAGCTGTTGTCCAGGTTTTTGAAGGGACATCTGGAATTGATAACAAATATACAACTGTGCAATTTACCGGAGAGGTTTTGAAAACTCCAGTTTCCTTGGACATGCTTGGGCGAATTTTTAATGGTTCTGGAAAACCCATTGATAATGGTCCTCCTATCCTGCCCGAGGCTTACTTGGATATTTCTGGGAGTTCTATAAACCCTAGTGAAAGAACTTATCCCGAAGAGATGATACAGACGGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCACTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATTGCTGCCCAGATATGTCGTCAGGCTGGCTTGGTAAAGCGGTTGGAGCAATCTAAAGATCTTCTTGAGGGTGGTGAAGAGGACAACTTTGCCATTGTTTTTGCCGCTATGGGTGTTAACATGGAGACTGCTCAATTTTTTAAACGTGATTTTGAGGAAAATGGTTCAATGGAGAGAGTGACCCTATTTCTGAACCTGGCTAATGATCCTACAATTGAGCGTATTATCACTCCTCGTATTGCTCTTACCACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTCGTCATACTGACAGATATGAGTTCTTATGCTGATGCCCTTCGAGAGGTGTCTGCTGCACGAGAGGAAGTACCTGGAAGGCGTGGATACCCTGGTTATATGTATACTGATCTTGCTACAATCTATGAGCGAGCTGGACGTATTGAAGGACGTAAAGGATCCATCACTCAAATCCCAATCCTCACTATGCCAAACGATGATATTACACATCCTACTCCCGATCTTACTGGCTATATTACTGAGGGACAGATTTACATCGATAGGCAGCTCTATAACAGACAGATATACCCACCAATTAATGTCCTTCCTTCATTGTCTCGTCTTATGAAGAGTGCTATTGGTGAGGGAATGACCCGTAGGGATCATGCTGATGTATCCAACCAGGCAATGAAAGCCGTGGTCGGAGAAGAAGCGCTCTCTTCTGAGGATCTGCTCTATTTAGAGTTTTTGGACAAATTTGAGAGGAAGTTTGTCAGTCAAGGAGCTTACGACACTCGAAACATTTTCCAATCGCTCGATCTGGCATGGACACTGCTTCGTATTTTCCCTCGTGAACTTCTCCACCGTATACCTGCAAAGACTCTTGATCAGTTTTACAGCCGAGAATCTGCAAATTGA | 1485 | 43.77 | MDSGSFLIVVSIASDSLWVWNKTITMPRRGLWRLAWVEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEQSKDLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRESAN | 494 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9040663 | 9045436 | - | CmaCh11G013650.1 | Cma11g01365 | 303874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01365 | 494 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 42 | 108 | IPR004100 | GO:0046034|GO:1902600 | |
Cma11g01365 | 494 | PIRSF | V-ATPsynth_beta/V-ATPase_B | 31 | 494 | IPR022879 | - | |
Cma11g01365 | 494 | TIGRFAM | V-ATPase_V1_B: V-type ATPase, B subunit | 38 | 493 | IPR005723 | GO:0033180|GO:0046961|GO:1902600 | |
Cma11g01365 | 494 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 37 | 494 | IPR022879 | - | |
Cma11g01365 | 494 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 112 | 401 | IPR027417 | - | |
Cma11g01365 | 494 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 165 | 395 | IPR000194 | GO:0005524 | |
Cma11g01365 | 494 | CDD | V_A-ATPase_B | 110 | 397 | - | - | |
Cma11g01365 | 494 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 386 | 395 | IPR020003 | GO:0005524 | |
Cma11g01365 | 494 | CDD | ATP-synt_V_A-type_beta_N | 38 | 109 | - | - | |
Cma11g01365 | 494 | Hamap | V-type ATP synthase beta chain [atpB]. | 36 | 492 | IPR022879 | - | |
Cma11g01365 | 494 | Gene3D | - | 47 | 494 | - | - | |
Cma11g01365 | 494 | CDD | ATP-synt_V_A-type_beta_C | 405 | 487 | - | - | |
Cma11g01365 | 494 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B1-RELATED | 37 | 494 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma11g01365 | Cma19g00752 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01365 | Cma-Chr11:9040663 | Cma15g00938 | Cma-Chr15:4979130 | 4.84E-26 | dispersed | |
Cma11g01365 | Cma-Chr11:9040663 | Cma19g00752 | Cma-Chr19:7482281 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01365 | K02147 | - | csv:101211838 | 885.945 |