Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01418 ATGGATCTGGAGAGTGCTATTAGGGGTCACTCAATCAAGAAGGATTCTTGGAAAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGTACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTGAGCACTCTGAAACTAATGAGGAGATTTATGGGATTCTTTCTTTTGTTTTCTGGACTCTCACGCTTATTCCTTTGATTAAATACGTTTTTATTGTTCTTCGAGCTGATGATAATGGCGAGGGGGGAACTTTTGCTTTGTACTCATTGCTTTGCCGCCATGCCCGAGTTGGCTCCTTGCCTAATTGTCAGCTCGCGGATGAGGACCTTTCTGAGTATACAAAAGATGGGGTGGATTTAACCACTAAGAACACTTGTGGGTCGAGATTGAAATCGACATTAGAGAACCATAGAGTGCTGCAGAGGGTTTTGCTTGTTCTTGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACTCCTGCCATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCAATGGCTAAAGAACATCATCGATACGTCGAAGTCCCGGTCGCTTGTGTCATATTAGTAATCCTATTTGCACTTCAACATTATGGAACCCATCGAGTCGGGTTTCTGTTCGCACCAGTTGTAATTACCTGGCTCGTGTGTATAAGTTCGATAGGGCTGTACAATATCTTCTACTGGAATCCCCATGTTTATCAAGCACTCTCCCCATATTATATGTACAAATTTTTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTGGGCGGCATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTCGCTGATCTCGGCCACTTCTCGCAGCTATCTATCAAGATTGCGTTTTCTTTTGTGGTTTATCCAGCTTTGGTATTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCACGGTGAAGAAAGTAACTATCGAATCGGATTTTACGTGTCGGTTCCTGAGAAAATAAGATGGCCTGTACTTGTGATAGCCATTTTAGCTGCAGTGGTCGGAAGTCAAGCTGTCATTACCGGGACGTTTTCGATAATAAAACAGTGCTCTGCGTTAGGCTGCTTCCCAAGGGTCAAAATTGTTCATACCTCGTCGAAAGTCCACGGCCAGATTTACATTCCGGAGATCAACTGGACTTTGATGATCCTGTGCTTGGCTATTACTGGTGGCTTTCGAGACACGAAACGAATGGGGAATGCATCAGGTTTAGCGGTAATAACCGTTATGCTAGTGACTACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGAACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTCGGGTTCATCGAATCACTCTACTTCTCGGCATCTCTCATCAAGTTTCAAGAAGGGGCGTGGGTTCCCATTGCCCTCTCGCTCATCTTCCTACTAGTCATGTACGTATGGCAATACGGAACGCACAAGAAATACGAGTATGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCTTAGGTCCAAGTTTAGGCATTGTCCGAGTACGCGGCATTGGTCTTATATACACTGAGCTAGTCTCAGGTATCCCCGCCATCTTCTCCCACTTTGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGTGTAAAATCTGTCCCCGTCCCACACGTGAGACCAGGAGAGAGATTCCTCGTAGGAAGAGTTGGACCAAAGGAGTACCGTCTGTATCGATGCATAGCACGATATGGATACCGCGACATCCACAAGGATGGTATCGAGTTCGAGAAGGACCTAGTGTGTAGCATTGCGGAGTTCATCAGGTCGGAGAAGGCGGAAACAAACATGAAGGTAGAAGATTTGGAAGAGAGCGAGAGAATGACGGTGGTGGGAACGTCGTCGACACACGTAGACGGAGTGCGAATGTGTGACGATGAAGGAGGAGGAGGAGGAGGAGGAGGAGAGACATCAGAGGTGAGGGAGATAAAGTCACCACAAAAAGTGAGGAAAAGAGTGAGGTTTGTTGTGCCTGAGAGCCCACAAATGGATGTGGAGGCAAGGAGAGAGCTGGAAGAGCTAATGGAAGCAAGAGAGGCAGGCATGGCTTTCATTATGGGACATTCATATGTGAAAGCAAAGAGAGGGTCAGGTTGGGTGAAGAAAATGGTGATAAATTATGGGTATGATTTCTTGAGAAGGAACTCAAGAGGGCCATCTTATGCTTGGACTGTGCCTCATGCATCTACTTTAGAGGTTGGGATGATCTACCAAGTTTGA 2331 45.6 MDLESAIRGHSIKKDSWKAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIEHSETNEEIYGILSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVGSLPNCQLADEDLSEYTKDGVDLTTKNTCGSRLKSTLENHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYVEVPVACVILVILFALQHYGTHRVGFLFAPVVITWLVCISSIGLYNIFYWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPALVLAYMGQAAYLSQHHGEESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKVHGQIYIPEINWTLMILCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWNKSFLFAIAFILIFGFIESLYFSASLIKFQEGAWVPIALSLIFLLVMYVWQYGTHKKYEYDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDGIEFEKDLVCSIAEFIRSEKAETNMKVEDLEESERMTVVGTSSTHVDGVRMCDDEGGGGGGGGETSEVREIKSPQKVRKRVRFVVPESPQMDVEARRELEELMEAREAGMAFIMGHSYVKAKRGSGWVKKMVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9334841 9340731 - CmaCh11G014180.1 Cma11g01418 303927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01418 776 Coils Coil 622 642 - -
Cma11g01418 776 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma11g01418 776 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma11g01418 776 PANTHER POTASSIUM TRANSPORTER 6 1 776 - -
Cma11g01418 776 TIGRFAM kup: potassium uptake protein 23 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma11g01418 776 MobiDBLite consensus disorder prediction 658 682 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02716 Cma11g01418 CCT
Cma11g01418 Cma15g00326 CCT
Cma04g02716 Cma11g01418 ECH
Cma11g01418 Cma15g00326 ECH
Cma11g01418 Cma14g00637 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01418 Cma-Chr11:9334841 Cma11g01561 Cma-Chr11:10170172 0 dispersed
Cma11g01418 Cma-Chr11:9334841 Cma14g00637 Cma-Chr14:3160662 0 wgd
Cma11g01418 Cma-Chr11:9334841 Cma15g00326 Cma-Chr15:1513622 0 wgd
Cma11g01418 Cma-Chr11:9334841 Cma04g02716 Cma-Chr4:18329852 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01418 K03549 - csv:101211664 1406.73