Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01426 ATGAAGGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGGTAGACGAGGAAGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGATGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACAGTAAAAATTGCGGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCTGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCACTTGCAAATGTAATGAAGCGATGTTGGGATGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA 1131 47.13 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKVDEEGGGGGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9401145 9404983 - CmaCh11G014260.1 Cma11g01426 303935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01426 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 370 - -
Cma11g01426 376 MobiDBLite consensus disorder prediction 32 61 - -
Cma11g01426 376 CDD STKc_MAP3K-like 79 347 - -
Cma11g01426 376 Gene3D Phosphorylase Kinase; domain 1 61 156 - -
Cma11g01426 376 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g01426 376 SUPERFAMILY Protein kinase-like (PK-like) 60 347 IPR011009 -
Cma11g01426 376 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g01426 376 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 370 - -
Cma11g01426 376 Pfam Protein tyrosine and serine/threonine kinase 75 347 IPR001245 GO:0004672|GO:0006468
Cma11g01426 376 PRINTS Tyrosine kinase catalytic domain signature 170 183 IPR001245 GO:0004672|GO:0006468
Cma11g01426 376 PRINTS Tyrosine kinase catalytic domain signature 208 226 IPR001245 GO:0004672|GO:0006468
Cma11g01426 376 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Cma11g01426 376 PRINTS Tyrosine kinase catalytic domain signature 318 340 IPR001245 GO:0004672|GO:0006468
Cma11g01426 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Cma11g01426 376 Gene3D Transferase(Phosphotransferase) domain 1 173 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01390 Cma-Chr6:9017207 Cma11g01426 Cma-Chr11:9401145 0 dispersed
Cma08g00330 Cma-Chr8:1899823 Cma11g01426 Cma-Chr11:9401145 0 dispersed
Cma11g01426 Cma-Chr11:9401145 Cma14g01731 Cma-Chr14:12710656 0 dispersed
Cma10g00131 Cma-Chr10:595793 Cma11g01426 Cma-Chr11:9401145 0 wgd
Cma11g00103 Cma-Chr11:548654 Cma11g01426 Cma-Chr11:9401145 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68917 PF07714 PK_Tyr_Ser-Thr 4.40E-64 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01426 - - csv:101212631 733.406