Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01426 | ATGAAGGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGGTAGACGAGGAAGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGATGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACAGTAAAAATTGCGGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCTGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCACTTGCAAATGTAATGAAGCGATGTTGGGATGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA | 1131 | 47.13 | MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKVDEEGGGGGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9401145 | 9404983 | - | CmaCh11G014260.1 | Cma11g01426 | 303935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01426 | 376 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 370 | - | - | |
Cma11g01426 | 376 | MobiDBLite | consensus disorder prediction | 32 | 61 | - | - | |
Cma11g01426 | 376 | CDD | STKc_MAP3K-like | 79 | 347 | - | - | |
Cma11g01426 | 376 | Gene3D | Phosphorylase Kinase; domain 1 | 61 | 156 | - | - | |
Cma11g01426 | 376 | ProSiteProfiles | Protein kinase domain profile. | 73 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g01426 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 347 | IPR011009 | - | |
Cma11g01426 | 376 | SMART | serkin_6 | 73 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma11g01426 | 376 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 370 | - | - | |
Cma11g01426 | 376 | Pfam | Protein tyrosine and serine/threonine kinase | 75 | 347 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | PRINTS | Tyrosine kinase catalytic domain signature | 170 | 183 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | PRINTS | Tyrosine kinase catalytic domain signature | 208 | 226 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | PRINTS | Tyrosine kinase catalytic domain signature | 274 | 296 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | PRINTS | Tyrosine kinase catalytic domain signature | 318 | 340 | IPR001245 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 214 | 226 | IPR008271 | GO:0004672|GO:0006468 | |
Cma11g01426 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 173 | 364 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g01390 | Cma-Chr6:9017207 | Cma11g01426 | Cma-Chr11:9401145 | 0 | dispersed | |
Cma08g00330 | Cma-Chr8:1899823 | Cma11g01426 | Cma-Chr11:9401145 | 0 | dispersed | |
Cma11g01426 | Cma-Chr11:9401145 | Cma14g01731 | Cma-Chr14:12710656 | 0 | dispersed | |
Cma10g00131 | Cma-Chr10:595793 | Cma11g01426 | Cma-Chr11:9401145 | 0 | wgd | |
Cma11g00103 | Cma-Chr11:548654 | Cma11g01426 | Cma-Chr11:9401145 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68917 | PF07714 | PK_Tyr_Ser-Thr | 4.40E-64 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01426 | - | - | csv:101212631 | 733.406 |