Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01514 | ATGGAGAATTATCAGATGTTTTTCCCCTGCTCCGGCGGCGAAGGGTTGTCGGCTTATCATCATCCCGACATGTCGTCCGACAGTGGGTCGGATGTTTTTGGGAGTTTTCACGGTGGGAACCTGCAGGGAAATGGGTTTTTGAAGATGGAGACGGCGGCGGTGGTCGAAGGCGACAGGAATAGCGGCGGCGATAGCTACCAAATCGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAGCCCAGATATGCTTTTGAGACAAAGAGCCAAGTTGACATTCTTGATGATGGATATCGTTGGAGAAAATATGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGGTGCACACATCAAGGATGTAATGTGAAGAAACAAGTGCAAAGGTTAACAAGAGACGAAGGGGTAGTGGTGACAACATATGAAGGCATGCACACACACTCCATTGATAAGCCAACAGATAACTTCGAACAAATCTTGAGTAGAATGCAGATTTACGGTACATCTTTCTGA | 528 | 46.21 | MENYQMFFPCSGGEGLSAYHHPDMSSDSGSDVFGSFHGGNLQGNGFLKMETAAVVEGDRNSGGDSYQIGGGKKKGEKKVRKPRYAFETKSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYGTSF | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9902931 | 9905220 | - | CmaCh11G015140.1 | Cma11g01514 | 304023 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01514 | 175 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 171 | IPR044810 | GO:0003700 | |
Cma11g01514 | 175 | SUPERFAMILY | WRKY DNA-binding domain | 88 | 154 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cma11g01514 | 175 | ProSiteProfiles | WRKY domain profile. | 90 | 155 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cma11g01514 | 175 | SMART | WRKY_cls | 95 | 154 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cma11g01514 | 175 | Gene3D | WRKY domain | 80 | 155 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cma11g01514 | 175 | MobiDBLite | consensus disorder prediction | 58 | 80 | - | - | |
Cma11g01514 | 175 | Pfam | WRKY DNA -binding domain | 96 | 152 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cma11g01514 | 175 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 1 | 171 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma11g01514 | Cma14g00727 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g01672 | Cma-Chr6:10315006 | Cma11g01514 | Cma-Chr11:9902931 | 1.55E-54 | dispersed | |
Cma11g01514 | Cma-Chr11:9902931 | Cma17g00379 | Cma-Chr17:2109793 | 1.23E-37 | dispersed | |
Cma11g01514 | Cma-Chr11:9902931 | Cma14g00727 | Cma-Chr14:3641445 | 3.98E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
35897 | PF03106 | WRKY | 3.50E-26 | CL0274 | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01514 | - | - | cmax:111486729 | 345.51 |