Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01534 ATGAATGACGCTGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTTTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCAGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCACGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGGTCTCTTTTGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTTTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGCTCACCAAGTATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGATGTGTACTGCTTTCGACTCTTTCATGGTGCTTCCTGTGAAATAA 744 45.03 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSGNEHVYKNLLKELIVQSLLRLKEPAVLLRCRKSDLHLVESVLSSAAYEYANKAEVHEPEIIVDHVHLPPGPSHHHHHGLFCSGGVVMASRDGKIVCENTLDARLDVVFRKKLPELTKYPKKPFQSSCCMMCTAFDSFMVLPVK 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10005362 10009088 - CmaCh11G015340.1 Cma11g01534 304043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01534 247 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cma11g01534 247 Coils Coil 38 61 - -
Cma11g01534 247 PANTHER BNAC03G72900D PROTEIN 1 226 - -
Cma11g01534 247 SUPERFAMILY V-type ATPase subunit E-like 87 221 - -
Cma11g01534 247 Gene3D - 1 62 - -
Cma11g01534 247 Gene3D - 92 226 IPR038495 -
Cma11g01534 247 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cma11g01534 247 Pfam ATP synthase (E/31 kDa) subunit 16 221 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01534 Cma-Chr11:10005362 Cma14g00746 Cma-Chr14:3716779 9.28E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01534 K02150 - csv:101217221 366.311