Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01543 | ATGGCCATCTCAGAATCTCAGACCCGTTCCTCTCTGATTCCTACTTTCCTCTACTCGTCTTCGGCCATTCCGTTCCAGAAGATGCTTCGCTCCAATGATCCTTGTGTATCGCCGTCGCCATCGCCATCTCCGATTGTCGAATCTACACCGAGGAAGGTCTTCGCGATTCCGTCTCCGAGTGAACCGAGAAAGAAACTGGAGATGTATTCGCCGGCTTTCTATGCTGCCTGTGCCTTCGGTGGAAGCCTCAGTTGTGGTCTCACTCACACGGCCGTCACTCCTCTCGATCTCATCAAGTGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTTTTAAAGGAGCAAGGAATCAGGGGCTTCTTCAGGGGTTGGGCGCCAACTTTTCTGGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGTATCTATGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAAGTACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCATTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCAGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTGGGGTTGTACAAGGGTATTGTTCCTCTATGGGGGCGTCAGATCCCATATACAATGATGAAATTTGCAACATTTGAGAATCTCGTGGAGCTCATCTACAAGCATGTCATTCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTGGGCGTCAGCTTTGCTGGTGGATATATTGCGGGAGTTTCTTGTGCTATAGTTTCTCACCCTGCAGACAATCTGGTCTCTTTTCTCAACAATGCTAAAGGGGCTACCGTTGGTGACGCTGTGAAGAAGCTTGGAGTATGGGGTCTCTTTACACGAGGGCTGCCTCTACGCATAGTCATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTACGACGCATTCAAAGTTTTTGTCGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCCCTGCCCCCGCCATTGAAATTCCAAGTGCGTAG | 1116 | 49.1 | MAISESQTRSSLIPTFLYSSSAIPFQKMLRSNDPCVSPSPSPSPIVESTPRKVFAIPSPSEPRKKLEMYSPAFYAACAFGGSLSCGLTHTAVTPLDLIKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWAPTFLGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVFVGLPTTGGVAPAPAPAIEIPSA | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10063250 | 10067255 | - | CmaCh11G015430.1 | Cma11g01543 | 304052 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01543 | 371 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 4 | 366 | IPR044677 | GO:0005315|GO:1990547 | |
Cma11g01543 | 371 | SUPERFAMILY | Mitochondrial carrier | 74 | 345 | IPR023395 | - | |
Cma11g01543 | 371 | Pfam | Mitochondrial carrier protein | 173 | 257 | IPR018108 | - | |
Cma11g01543 | 371 | Pfam | Mitochondrial carrier protein | 74 | 158 | IPR018108 | - | |
Cma11g01543 | 371 | Gene3D | Mitochondrial carrier domain | 51 | 164 | IPR023395 | - | |
Cma11g01543 | 371 | Gene3D | Mitochondrial carrier domain | 165 | 351 | IPR023395 | - | |
Cma11g01543 | 371 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 169 | 253 | IPR018108 | - | |
Cma11g01543 | 371 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 72 | 156 | IPR018108 | - | |
Cma11g01543 | 371 | PANTHER | MITOCHONDRIAL PHOSPHATE TRANSPORTER | 4 | 366 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02217 | Cma-Chr4:15459949 | Cma11g01543 | Cma-Chr11:10063250 | 0 | dispersed | |
Cma11g01543 | Cma-Chr11:10063250 | Cma15g00816 | Cma-Chr15:4108364 | 0 | dispersed | |
Cma11g01327 | Cma-Chr11:8803788 | Cma11g01543 | Cma-Chr11:10063250 | 4.15E-110 | transposed | |
Cma10g00026 | Cma-Chr10:98679 | Cma11g01543 | Cma-Chr11:10063250 | 0 | wgd | |
Cma11g00008 | Cma-Chr11:45311 | Cma11g01543 | Cma-Chr11:10063250 | 2.85E-30 | wgd | |
Cma11g01543 | Cma-Chr11:10063250 | Cma14g00756 | Cma-Chr14:3776396 | 3.90E-09 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01543 | K15102 | - | csv:101203018 | 619.772 |