Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01571 ATGTGGGACATCACAACCTACTTCAAGCCATTCCCTGGCTATTACTTTACTGGTGATGGCTGCACCAAGGAAATCAAGGCGCTCGATCTCATGGATAAGGATGGATATTACTGGCTTACCGGAAGAGTTGATGATGTTATCAATGTCAGTGGGCATCGTATTGGCACAGCAGAAGTGGAATCTGCCTTAGTTTCACATCCCCAATGTGCAGAAGCAGCTGTAGTTGGTATCAAGCACGAGGTGAAAGGACAAGGGATTTATGCATTTGTGACTCTAGTGGATGGTGTTTCTTATAGTGAAGAGCTAAGGAAAAGCCTTATTCTCACGGTTAGAAACCAGATGGTATCAGAGAGCGACATCAGGCGATGTGCCAGCGAGGATGTTGAGACTCCAAAGGAGTGA 402 46.02 MWDITTYFKPFPGYYFTGDGCTKEIKALDLMDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIKHEVKGQGIYAFVTLVDGVSYSEELRKSLILTVRNQMVSESDIRRCASEDVETPKE 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10229105 10230887 + CmaCh11G015710.1 Cma11g01571 304080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01571 133 Pfam AMP-binding enzyme C-terminal domain 58 113 IPR025110 -
Cma11g01571 133 Gene3D - 2 44 IPR042099 -
Cma11g01571 133 Gene3D - 47 121 IPR045851 -
Cma11g01571 133 SUPERFAMILY Acetyl-CoA synthetase-like 7 114 - -
Cma11g01571 133 PANTHER ACETYL-COENZYME A SYNTHETASE 5 114 - -
Cma11g01571 133 PANTHER ACETYL-COENZYME A SYNTHETASE 5 114 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01571 Cma14g01158 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01571 Cma-Chr11:10229105 Cma15g00803 Cma-Chr15:4033236 9.43E-52 dispersed
Cma11g01571 Cma-Chr11:10229105 Cma14g00785 Cma-Chr14:3917176 1.53E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01571 K01895 - csv:101203579 196.823