Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01642 | ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCCCGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGTGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATTCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCCCTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTCGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCGGGAACTCTTAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGATTGTAG | 768 | 55.21 | MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10800460 | 10802592 | + | CmaCh11G016420.1 | Cma11g01642 | 304151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01642 | 255 | Gene3D | Chlorophyll a/b binding protein domain | 67 | 254 | - | - | |
Cma11g01642 | 255 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 255 | IPR001344 | GO:0009765|GO:0016020 | |
Cma11g01642 | 255 | SUPERFAMILY | Chlorophyll a-b binding protein | 64 | 255 | - | - | |
Cma11g01642 | 255 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC | 1 | 255 | - | - | |
Cma11g01642 | 255 | Pfam | Chlorophyll A-B binding protein | 67 | 243 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01642 | Cma-Chr11:10800460 | Cma15g00603 | Cma-Chr15:2856967 | 7.69E-180 | dispersed | |
Cma11g01642 | Cma-Chr11:10800460 | Cma04g01836 | Cma-Chr4:9264652 | 7.70E-35 | transposed | |
Cma11g01642 | Cma-Chr11:10800460 | Cma18g00694 | Cma-Chr18:6352027 | 1.62E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01642 | K08917 | - | csv:101204705 | 500.745 |