Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01675 | ATGTTGCAGTTTTCGATTCGGCGAGTGAGGAAATTGAATGTTCTGAGGCCTCAGATCTTTGCTCTTGGCAATTCTCGATTCTCCACCTCTCCTGAACCGTCTTCCAAGCCTAATCCTCCGAGAGTTCCTAATCTTATAGGAGGGAATTTTGTTGATTCCCGATCCTCAGCATTCATAGATGTCATAAATCCAGCGACCCAAGAAGTTGTTTCTCAAGTTCCATTAACCACAAATGAAGAATTTAAAGCTGCAGTTTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACCCCGGTCACAACTCGCCAAAGAGTTATGCTCAAGCTTCAAGAACTTATCAGGCGAGATATTGACAAACTTGCTCTAAATATTACTACAGAACAAGGAAAAACATTAAAGGATGCGCATGGAGATGTATTCCGGGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCTTCTCTGCAAATGGGGGAATATGTCTCTAATGTTTCACATGGAATTGATACGTACAGCATCAGAGAGCCTCTAGGCGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATTCCCCTATGGATGTTTCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTTGGTTCAAACATTGCGGGCATGCATATATTTTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGCGCAAAAAATCATGCAATTGTCTTGCCTGATGCCAACATAGATACTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAATTGTGGGAGGATAAACTTGTAGAATGTGCCAACGCTCTGAAGGTAAGTTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGAGAGGATTCACAGATTAGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAGATATAGTGGTTCCTGGATATGAGCATGGAAATTTTATTGGCCCTACTATCTTAACAGACGTGACGCCTGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTTGAGGAGGCCATTAGCATCGTTAACAGAAATAGGTATGGCAATGGAGCTTCCATATTCACCGAATCTGGCATAGCAGCGAGGAAGTTTCAAACTGAAATTGAAGCTGGACAGGTCGGAATCAACGTTCCAATCCCTGTTCCCTTGCCCTTCTTCTCGTTCACCGGCTCCAAGGCATCATTCGCTGGGGATCTCAACTTTTATGAGGGTGGCGTGATTGTATGTCCACCACCGCCGTCCTCCACCGCGGTTGATTCTCTCCGCCGTTCTCCCGCGGAGACCCGCAAAACTCTTCTTCCTCTGAACTTTTCGACCAATTTCAATCTCCTCAAACCGTATCTCTCATCAATTCAACGATTCCAAGAAACCCCGACTCCATCCTTGCCCAATCCACAGTCGTCCATGGCGAACGAACAAGTGCCTCCCTCTCCATCGTCTTCCTCCTCCTCTGCTGCTGCTCCCTTGGGCAACTCCGTCATCCCTATAGTGAACAAGCTCCAGGACATTTTTGCTCAGTTGGGCAGCGAATCCACCATTGAGCTCCCTCAGGTTGCTGTCGTCGGTAGTCAGAGCAGTGGCAAGTCGAGCGTACTGGAAGCCCTCGTCGGTCGTGACTTTCTGCCTAGGGGTTCCGATATCTGTACGCGGCGGCCATTGGTGCTTCAGCTCTTGCAGACCAAGACTGGTGAGGAGTATGGGGAGTTCTTGCACCTACCTGGGAAGAAATTTCACGACTTCTCTGAAATTCGGAGGGAAATTCGTGCTGAGACTGATCGGGAGGCTGGAGGAAATAAAGGCGTCTCAGACAAGCAAATTCGTTTGAAGATCTTTTCACCTACTGTTCTCGATATAACTCTGGTTGATCTTCCTGGTATAACAAAAGTCCCAGTTGGGGATCAACCTTCTGATATTGAAGCTCGCATTAGGACAATGATTATGTCCTACATTAAAGTTCCAAGCTGTTTGATTCTTGCCGTCACACCAGCAAATTCTGATTTAGCTAACTCAGATGCTCTTCAGATTGCTGGAAATGCTGATCCTGATGGTATTAGAACGATTGGGATAATCACAAAGCTAGACATAATGGATAGAGGCACTGATGCACGTAACCTTTTGTATGGAAAAGTGATTCCCTTGCGACTTGGCTACTTTGGTGTTGTGAATCGAAGTCAGGAGGATATTTTACTGAACCGGAGTATCAAAGATGCACTTATAGCTGAGGAGAAATTTTTTCGCAGCCATCCAGTATATGATGGTCTGGCTGATCGTTGTGGTGTTCCTCAATTGGCCAAGAAGCTGAACCAGATTTTAGTGCAACATATCAAGGCAATTCTACCTGGGTTAAAGTCACGCATAAGCTCTGCACTAGTTTCAGCTGCCAAAGAGCATGCCAGTTATGGAGATATAACGGAGTCAAAGGTGTATTTGATTGCTAAAGATTATTTTTATGGTTCAGAGGCTGGTCAAGGTGCTCTACTTCTGAATATTTTATCCAAATATTGTGAAGCATTTGCATCAATGGTTGACGGGAAGAATGGAGAAATGTCAACATCTGAGCTCTCAGGTGGTGCTCGTATTCACTATATTTTCCAGTCAATATTCGTGAAGAGTTTAGAGGAAGTGGATCCATGTGAGAACTTAACTGATGATGACATCCGAACTGCTATCCAGAATGCAACTGGCCCTAAATCTGCTTTATTTGTACCCGAAGTTCCTTTTGAAGTTCTTATTCGCAAGCAAATAGCTCGCTTACTAGATCCAAGCCTCCAGTGTGCAAGGTTGATATATGAGGAACTAGTTAAGATTAGCCATCATTGCGTGGTAAATGAACTACAGAGATTTCCTGTTTTAAGAAAGCGCATGGATGAAGTTATGGGCAATTTTTTGCGAGAAGGTCTTGAACCCTCAGAGACTATGATTGGGCATATCATCGATGTGGAGATGGACTACATAAACACTTCACACCCGAATTTTCTTGGTGGGAGCAAGGCTGTTGAGATTGCATTGCAACAAGTCAAATCTTCTAGGGTTTCCCTGCCTATCTCTAGACAGAAGGCTCGTCCATTGGCAGAAGCTGAAAAAGTTACTTTGTCTGGAGGCACAGGGAGTTCTAATTGGGGGATTTCATCTATTTTTGGTAGTAATAGTAGTGATAACCGTACTTCTGTTAAAGAAAATTCATCAAAAAAACCATTTGGAGAGCCTCTTCATAATGTTGAGCACTCTTTCTCAATGATCCAGTTGAGAGAGCCACCAACTGTTTTGAGGCCCTCAGAAACCCATACGGAGCAGGAGGCTATTGAAATTGCTATAACTAAACTGCTTTTGAGATCCTATTATGATATTGTTAGAAAGAATATTGAGGACTTGGTACCTAAAACCATCATGCACTTCCTGGTAAACCATTCAAAGCGCGTTCTGCACAATGTATTCATTAAAAAACTTTACAGAGAGAACCTGTTTGAAGAGATGTTGCAGGAGCCGGATGAAGTGGCAATGAAGAGAAAGCGTACAAGGGAAACTCTCCGTGTACTTCAACAGGCTTTTCGGACATTGGATGAATTGCCTTTGGAGGCTGAAACAGTTGAAAAGGGATACAACGTTGGTGCCGATCCAACCGGATTACCGAGGATCCATGGACTCCCAACATCATCAATGTATTCTACATTCAGTTCCAGTGATTCATATTCTGCTTCTCCAGGGCACCTGAAATCCCGCAAGTCATCTCATTCAGGGGAGCATTTGTCTCCATTCCATGCTAATGCTGAGTTAAACGGAAGCGGATTCTCGTAA | 4089 | 44.22 | MLQFSIRRVRKLNVLRPQIFALGNSRFSTSPEPSSKPNPPRVPNLIGGNFVDSRSSAFIDVINPATQEVVSQVPLTTNEEFKAAVSAAKQAFPAWRNTPVTTRQRVMLKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIFSRGSAKGKRVQSNMGAKNHAIVLPDANIDTTLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVECANALKVSSGTEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRDIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESFEEAISIVNRNRYGNGASIFTESGIAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYEGGVIVCPPPPSSTAVDSLRRSPAETRKTLLPLNFSTNFNLLKPYLSSIQRFQETPTPSLPNPQSSMANEQVPPSPSSSSSSAAAPLGNSVIPIVNKLQDIFAQLGSESTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLLQTKTGEEYGEFLHLPGKKFHDFSEIRREIRAETDREAGGNKGVSDKQIRLKIFSPTVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKVPSCLILAVTPANSDLANSDALQIAGNADPDGIRTIGIITKLDIMDRGTDARNLLYGKVIPLRLGYFGVVNRSQEDILLNRSIKDALIAEEKFFRSHPVYDGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSAAKEHASYGDITESKVYLIAKDYFYGSEAGQGALLLNILSKYCEAFASMVDGKNGEMSTSELSGGARIHYIFQSIFVKSLEEVDPCENLTDDDIRTAIQNATGPKSALFVPEVPFEVLIRKQIARLLDPSLQCARLIYEELVKISHHCVVNELQRFPVLRKRMDEVMGNFLREGLEPSETMIGHIIDVEMDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQKARPLAEAEKVTLSGGTGSSNWGISSIFGSNSSDNRTSVKENSSKKPFGEPLHNVEHSFSMIQLREPPTVLRPSETHTEQEAIEIAITKLLLRSYYDIVRKNIEDLVPKTIMHFLVNHSKRVLHNVFIKKLYRENLFEEMLQEPDEVAMKRKRTRETLRVLQQAFRTLDELPLEAETVEKGYNVGADPTGLPRIHGLPTSSMYSTFSSSDSYSASPGHLKSRKSSHSGEHLSPFHANAELNGSGFS | 1362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11016110 | 11041472 | - | CmaCh11G016750.1 | Cma11g01675 | 304184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01675 | 1362 | Pfam | Dynamin family | 616 | 790 | IPR045063 | - | |
Cma11g01675 | 1362 | Pfam | Aldehyde dehydrogenase family | 50 | 498 | IPR015590 | GO:0016491 | |
Cma11g01675 | 1362 | PANTHER | DYNAMIN | 1119 | 1317 | IPR022812 | - | |
Cma11g01675 | 1362 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 44 | 501 | IPR010061 | GO:0004491 | |
Cma11g01675 | 1362 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 61 | 495 | IPR016162 | GO:0016491 | |
Cma11g01675 | 1362 | CDD | DLP_1 | 611 | 878 | IPR001401 | GO:0003924|GO:0005525 | |
Cma11g01675 | 1362 | ProSiteProfiles | GED domain profile. | 1201 | 1292 | IPR020850 | - | |
Cma11g01675 | 1362 | ProSiteProfiles | Dynamin-type guanine nucleotide-binding (G) domain profile. | 610 | 878 | IPR030381 | GO:0005525 | |
Cma11g01675 | 1362 | CDD | ALDH_F6_MMSDH | 42 | 500 | IPR010061 | GO:0004491 | |
Cma11g01675 | 1362 | PANTHER | DYNAMIN 3A-LIKE PROTEIN | 582 | 1118 | - | - | |
Cma11g01675 | 1362 | SMART | dynamin_3 | 588 | 830 | IPR001401 | GO:0003924|GO:0005525 | |
Cma11g01675 | 1362 | MobiDBLite | consensus disorder prediction | 1148 | 1167 | - | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 710 | 727 | IPR022812 | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 760 | 778 | IPR022812 | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 779 | 795 | IPR022812 | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 802 | 821 | IPR022812 | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 613 | 631 | IPR022812 | - | |
Cma11g01675 | 1362 | PRINTS | Dynamin signature | 638 | 655 | IPR022812 | - | |
Cma11g01675 | 1362 | ProSitePatterns | Dynamin-type guanine nucleotide-binding (G) domain signature. | 639 | 648 | IPR019762 | - | |
Cma11g01675 | 1362 | Pfam | Dynamin central region | 799 | 1098 | IPR000375 | - | |
Cma11g01675 | 1362 | Pfam | Dynamin GTPase effector domain | 1197 | 1286 | IPR003130 | GO:0003924|GO:0005525 | |
Cma11g01675 | 1362 | Gene3D | - | 589 | 912 | IPR027417 | - | |
Cma11g01675 | 1362 | MobiDBLite | consensus disorder prediction | 1330 | 1362 | - | - | |
Cma11g01675 | 1362 | PANTHER | DYNAMIN 3A-LIKE PROTEIN | 1119 | 1317 | - | - | |
Cma11g01675 | 1362 | SUPERFAMILY | ALDH-like | 38 | 497 | IPR016161 | GO:0016491 | |
Cma11g01675 | 1362 | MobiDBLite | consensus disorder prediction | 553 | 584 | - | - | |
Cma11g01675 | 1362 | Gene3D | Dynamin, middle domain | 921 | 1267 | - | - | |
Cma11g01675 | 1362 | SMART | GED_2 | 1196 | 1287 | IPR003130 | GO:0003924|GO:0005525 | |
Cma11g01675 | 1362 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 312 | 323 | IPR016160 | GO:0016491 | |
Cma11g01675 | 1362 | PANTHER | DYNAMIN | 582 | 1118 | IPR022812 | - | |
Cma11g01675 | 1362 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 590 | 886 | IPR027417 | - | |
Cma11g01675 | 1362 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 287 | 487 | IPR016163 | GO:0016620 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00850 | Cma-Chr3:6357351 | Cma11g01675 | Cma-Chr11:11016110 | 0 | dispersed | |
Cma11g01675 | Cma-Chr11:11016110 | Cma16g00540 | Cma-Chr16:2759104 | 5.46E-91 | dispersed | |
Cma19g00489 | Cma-Chr19:5820483 | Cma11g01675 | Cma-Chr11:11016110 | 1.68E-26 | dispersed | |
Cma20g00289 | Cma-Chr20:1399262 | Cma11g01675 | Cma-Chr11:11016110 | 7.55E-60 | dispersed | |
Cma19g00487 | Cma-Chr19:5815811 | Cma11g01675 | Cma-Chr11:11016110 | 5.44E-08 | transposed | |
Cma11g01675 | Cma-Chr11:11016110 | Cma19g00485 | Cma-Chr19:5782770 | 0 | wgd | |
Cma11g01675 | Cma-Chr11:11016110 | Cma03g00849 | Cma-Chr3:6355250 | 5.10E-12 | wgd | |
Cma11g01675 | Cma-Chr11:11016110 | Cma04g00407 | Cma-Chr4:2078446 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01675 | K17065 | - | csv:101208055 | 1300.42 |