Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01693 ATGAGAGGGCAGCATTCTCACCCACCGAAGCCGGTTTTCGCCGGACCTGATGACGAAAACGAACCGGGTCGTTCTTATCTCGCCGGAACGAACGCCCCATTAGGCGCTGGGATTCGGAAGAAGGGGACCGGAGTTCGGCCATGGCTGCTTCTGGACTTGACTGGTGGAGCTCAGGTCGTTGAGGCCGGAAAACACGCGATTATGCGGCGGACCGGCCTGCCCGCGCGAGACCTCCGGATTCTCGATCCGATGCTCTCGTATCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCATATCAAAGCTATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCAGTTACCCCCTTTGTCGAGGAGCTTCAGAGGCGGGTTCTACGGCACTACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGTGATGATTCCAGTTGGAGAAATCTCTATGACTTGGAGGAGCCACGATCCAGGGCTCAAAGTCCCCATAATCCCTATCAAGGATTTCCACAGGCTGAGGAGGAAGAGGGGAAGGAAAACGGTAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTACCGTTCGAGTTCGTCGCGTTGGAGGCATGCCTTGAAGCTGCCTGCAGCTGCTTAGAAAGTGAAGCAGATACGTTGGAGCAAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGTGTGCGTCAAATCAAAAGTCGATTGGTTGCGATAACTGGGCGAGTTCAAAAGGTGAGGGACGAATTAGAGCACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCGCGAGAGGGACGAAATGGACGATGATGTTCAGCAATTAGGCAAAGATGACAGGGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAAATTCTGCTAATTATGAAGGCAATATAGATGCTTCACAGGATCATTTATTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGAACCCGAACAAGCACTACCCATAGCGCTGTAAGCAAACTCCTCGATGTCGAGGAGCTAGAGATGCTGTTGGAGGCTTACTTCGTGCAAATTGATGGTACACTCAACAAACTTTCAACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTAGATGACAAGCAGAATCATCTTTTACAAATGGGAGTAATGTTGACAACTGCTACCCTTGTCGTGAGTGCTTTTGTCGTGGTAGCAGGTATCTTCGGGATGAACATCCATATTGAACTATTCGAACCAGAAAAAGCAGGCATGCCGGAGTTCATGTGGACTGTTGGTGGTGGCACTATGGGAACCATCTTCCTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTTTGCTCGAGTAG 1497 49.03 MRGQHSHPPKPVFAGPDDENEPGRSYLAGTNAPLGAGIRKKGTGVRPWLLLDLTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHYQATKAAQEGNGDDSSWRNLYDLEEPRSRAQSPHNPYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIRERDEMDDDVQQLGKDDRDDSIPAEISLEGGGNSANYEGNIDASQDHLFGASNVGRDSHGTRTSTTHSAVSKLLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFMWTVGGGTMGTIFLYVIAIAWCKHKRLLE 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11177026 11180703 + CmaCh11G016930.1 Cma11g01693 304202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01693 498 Pfam CorA-like Mg2+ transporter protein 382 488 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma11g01693 498 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 32 498 IPR039204 -
Cma11g01693 498 MobiDBLite consensus disorder prediction 352 371 - -
Cma11g01693 498 CDD Mrs2_Mfm1p-like 48 496 IPR039204 -
Cma11g01693 498 Gene3D Magnesium transport protein CorA, transmembrane region 157 426 - -
Cma11g01693 498 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 32 498 - -
Cma11g01693 498 MobiDBLite consensus disorder prediction 163 191 - -
Cma11g01693 498 MobiDBLite consensus disorder prediction 1 32 - -
Cma11g01693 498 MobiDBLite consensus disorder prediction 293 328 - -
Cma11g01693 498 Coils Coil 211 231 - -
Cma11g01693 498 Gene3D - 38 119 - -
Cma11g01693 498 MobiDBLite consensus disorder prediction 302 328 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01693 Cma19g00542 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01693 Cma-Chr11:11177026 Cma14g01051 Cma-Chr14:5538346 3.44E-116 dispersed
Cma11g01693 Cma-Chr11:11177026 Cma19g00542 Cma-Chr19:6234736 1.76E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01693 - - mcha:111017360 837.795