Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01693 | ATGAGAGGGCAGCATTCTCACCCACCGAAGCCGGTTTTCGCCGGACCTGATGACGAAAACGAACCGGGTCGTTCTTATCTCGCCGGAACGAACGCCCCATTAGGCGCTGGGATTCGGAAGAAGGGGACCGGAGTTCGGCCATGGCTGCTTCTGGACTTGACTGGTGGAGCTCAGGTCGTTGAGGCCGGAAAACACGCGATTATGCGGCGGACCGGCCTGCCCGCGCGAGACCTCCGGATTCTCGATCCGATGCTCTCGTATCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCATATCAAAGCTATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCAGTTACCCCCTTTGTCGAGGAGCTTCAGAGGCGGGTTCTACGGCACTACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGTGATGATTCCAGTTGGAGAAATCTCTATGACTTGGAGGAGCCACGATCCAGGGCTCAAAGTCCCCATAATCCCTATCAAGGATTTCCACAGGCTGAGGAGGAAGAGGGGAAGGAAAACGGTAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTACCGTTCGAGTTCGTCGCGTTGGAGGCATGCCTTGAAGCTGCCTGCAGCTGCTTAGAAAGTGAAGCAGATACGTTGGAGCAAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGTGTGCGTCAAATCAAAAGTCGATTGGTTGCGATAACTGGGCGAGTTCAAAAGGTGAGGGACGAATTAGAGCACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCGCGAGAGGGACGAAATGGACGATGATGTTCAGCAATTAGGCAAAGATGACAGGGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAAATTCTGCTAATTATGAAGGCAATATAGATGCTTCACAGGATCATTTATTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGAACCCGAACAAGCACTACCCATAGCGCTGTAAGCAAACTCCTCGATGTCGAGGAGCTAGAGATGCTGTTGGAGGCTTACTTCGTGCAAATTGATGGTACACTCAACAAACTTTCAACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTAGATGACAAGCAGAATCATCTTTTACAAATGGGAGTAATGTTGACAACTGCTACCCTTGTCGTGAGTGCTTTTGTCGTGGTAGCAGGTATCTTCGGGATGAACATCCATATTGAACTATTCGAACCAGAAAAAGCAGGCATGCCGGAGTTCATGTGGACTGTTGGTGGTGGCACTATGGGAACCATCTTCCTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTTTGCTCGAGTAG | 1497 | 49.03 | MRGQHSHPPKPVFAGPDDENEPGRSYLAGTNAPLGAGIRKKGTGVRPWLLLDLTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHYQATKAAQEGNGDDSSWRNLYDLEEPRSRAQSPHNPYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIRERDEMDDDVQQLGKDDRDDSIPAEISLEGGGNSANYEGNIDASQDHLFGASNVGRDSHGTRTSTTHSAVSKLLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFMWTVGGGTMGTIFLYVIAIAWCKHKRLLE | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11177026 | 11180703 | + | CmaCh11G016930.1 | Cma11g01693 | 304202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01693 | 498 | Pfam | CorA-like Mg2+ transporter protein | 382 | 488 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
Cma11g01693 | 498 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 32 | 498 | IPR039204 | - | |
Cma11g01693 | 498 | MobiDBLite | consensus disorder prediction | 352 | 371 | - | - | |
Cma11g01693 | 498 | CDD | Mrs2_Mfm1p-like | 48 | 496 | IPR039204 | - | |
Cma11g01693 | 498 | Gene3D | Magnesium transport protein CorA, transmembrane region | 157 | 426 | - | - | |
Cma11g01693 | 498 | PANTHER | MAGNESIUM TRANSPORTER MRS2-D-RELATED | 32 | 498 | - | - | |
Cma11g01693 | 498 | MobiDBLite | consensus disorder prediction | 163 | 191 | - | - | |
Cma11g01693 | 498 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cma11g01693 | 498 | MobiDBLite | consensus disorder prediction | 293 | 328 | - | - | |
Cma11g01693 | 498 | Coils | Coil | 211 | 231 | - | - | |
Cma11g01693 | 498 | Gene3D | - | 38 | 119 | - | - | |
Cma11g01693 | 498 | MobiDBLite | consensus disorder prediction | 302 | 328 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma11g01693 | Cma19g00542 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01693 | Cma-Chr11:11177026 | Cma14g01051 | Cma-Chr14:5538346 | 3.44E-116 | dispersed | |
Cma11g01693 | Cma-Chr11:11177026 | Cma19g00542 | Cma-Chr19:6234736 | 1.76E-109 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01693 | - | - | mcha:111017360 | 837.795 |